RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 ZNF561-AS1K7EIQ3 104 aa4.05□□□□□ -1.76
PTPRD-212ENST00000488774 SERF1AO75920 110 aa4.05□□□□□ -1.76
PTPRD-212ENST00000488774 ZNF22P17026 224 aaPredicted RBP4.05□□□□□ -1.76
PTPRD-212ENST00000488774 GAGE2BQ13066 116 aa4.05□□□□□ -1.76
PTPRD-212ENST00000488774 STPG4Q8N801 248 aa4.05□□□□□ -1.76
PTPRD-212ENST00000488774 Q8NDZ9 215 aa4.05□□□□□ -1.76
PTPRD-212ENST00000488774 OR10D4PQ8NGN7 298 aa4.05□□□□□ -1.76
PTPRD-212ENST00000488774 C2orf48Q96LS8 159 aa4.05□□□□□ -1.76
PTPRD-212ENST00000488774 CAMK2N2Q96S95 79 aa4.05□□□□□ -1.76
PTPRD-212ENST00000488774 TINCRA0A1B0GVN0 87 aa4.04□□□□□ -1.76
PTPRD-212ENST00000488774 HBDP02042 147 aa4.04□□□□□ -1.76
PTPRD-212ENST00000488774 NPSP0C0P6 89 aa4.04□□□□□ -1.76
PTPRD-212ENST00000488774 IGLC3P0DOY3 106 aa4.04□□□□□ -1.76
PTPRD-212ENST00000488774 PMVKQ15126 192 aa4.04□□□□□ -1.76
PTPRD-212ENST00000488774 PHF5AQ7RTV0 110 aaKnown RBP4.04□□□□□ -1.76
PTPRD-212ENST00000488774 LINC00469Q8N7U9 141 aa4.04□□□□□ -1.76
PTPRD-212ENST00000488774 MRPL35Q9NZE8 188 aaKnown RBP4.04□□□□□ -1.76
PTPRD-212ENST00000488774 TOMM7Q9P0U1 55 aa4.04□□□□□ -1.76
PTPRD-212ENST00000488774 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.03□□□□□ -1.76
PTPRD-212ENST00000488774 IGLV5-39A0A0G2JS06 123 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 HIST1H2BKO60814 126 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 APOMO95445 188 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 HIST1H2BJP06899 126 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 HIST1H2BOP23527 126 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 HIST1H2BBP33778 126 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 NDUFA6P56556 154 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 HIST1H2BDP58876 126 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 HIST1H2BCP62807 126 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 RPL18AQ02543 176 aaKnown RBP4.03□□□□□ -1.76
PTPRD-212ENST00000488774 HIST2H2BEQ16778 126 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.03□□□□□ -1.76
PTPRD-212ENST00000488774 SERTAD4-AS1Q5TG53 156 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 Q6ZN92 141 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 HIST1H2BHQ93079 126 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 HIST1H2BNQ99877 126 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 HIST1H2BMQ99879 126 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 PMCHL2Q9BQD1 86 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 C2orf88Q9BSF0 95 aa4.03□□□□□ -1.76
PTPRD-212ENST00000488774 LOC107984640A0A0U1RRK4 108 aa4.02□□□□□ -1.77
PTPRD-212ENST00000488774 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.02□□□□□ -1.77
PTPRD-212ENST00000488774 MT1HL1P0DM35 61 aa4.02□□□□□ -1.77
PTPRD-212ENST00000488774 TSPEAR-AS2P59090 65 aa4.02□□□□□ -1.77
PTPRD-212ENST00000488774 RAB5BP61020 215 aa4.02□□□□□ -1.77
PTPRD-212ENST00000488774 RPL37AP61513 92 aaKnown RBP4.02□□□□□ -1.77
PTPRD-212ENST00000488774 HERVK_113P63121 156 aa4.02□□□□□ -1.77
PTPRD-212ENST00000488774 SMAGPQ0VAQ4 97 aa4.02□□□□□ -1.77
PTPRD-212ENST00000488774 GAGE2EQ4V326 116 aa4.02□□□□□ -1.77
PTPRD-212ENST00000488774 BAGE3Q86Y29 109 aa4.02□□□□□ -1.77
PTPRD-212ENST00000488774 Q8IZM0 81 aa4.02□□□□□ -1.77
PTPRD-212ENST00000488774 LINC01561Q8N1V8 128 aa4.02□□□□□ -1.77
PTPRD-212ENST00000488774 GAGE2DQ9UEU5 116 aa4.02□□□□□ -1.77
PTPRD-212ENST00000488774 NDUFA1O15239 70 aa4.01□□□□□ -1.77
PTPRD-212ENST00000488774 ATP6V1G1O75348 118 aa4.01□□□□□ -1.77
PTPRD-212ENST00000488774 TLX1NBP0CAT3 122 aa4.01□□□□□ -1.77
PTPRD-212ENST00000488774 PRR3P79522 188 aaKnown RBP4.01□□□□□ -1.77
PTPRD-212ENST00000488774 RNF151Q2KHN1 245 aa4.01□□□□□ -1.77
PTPRD-212ENST00000488774 FAM19A5Q7Z5A7 132 aaPredicted RBP4.01□□□□□ -1.77
PTPRD-212ENST00000488774 COX7B2Q8TF08 81 aa4.01□□□□□ -1.77
PTPRD-212ENST00000488774 IFI27L1Q96BM0 104 aa4.01□□□□□ -1.77
PTPRD-212ENST00000488774 CHCHD1Q96BP2 118 aaKnown RBP4.01□□□□□ -1.77
PTPRD-212ENST00000488774 DPH3Q96FX2 82 aa4.01□□□□□ -1.77
PTPRD-212ENST00000488774 GEMIN7Q9H840 131 aaKnown RBP4.01□□□□□ -1.77
PTPRD-212ENST00000488774 XAGE1AQ9HD64 81 aa4.01□□□□□ -1.77
PTPRD-212ENST00000488774 KRTAP9-6A0A140TA67 174 aa4□□□□□ -1.77
PTPRD-212ENST00000488774 H0Y8G0 127 aa4□□□□□ -1.77
PTPRD-212ENST00000488774 FABP4P15090 132 aa4□□□□□ -1.77
PTPRD-212ENST00000488774 KRTAP9-2Q9BYQ4 174 aa4□□□□□ -1.77
PTPRD-212ENST00000488774 PSORS1C2Q9UIG4 136 aa4□□□□□ -1.77
PTPRD-212ENST00000488774 CHTOPQ9Y3Y2 248 aaKnown RBP4□□□□□ -1.77
PTPRD-212ENST00000488774 TRBV30A0A0K0K1B3 111 aa3.99□□□□□ -1.77
PTPRD-212ENST00000488774 TMEM223A0PJW6 202 aa3.99□□□□□ -1.77
PTPRD-212ENST00000488774 NDUFC2-KCTD14E9PQ53 114 aa3.99□□□□□ -1.77
PTPRD-212ENST00000488774 SRSF9Q13242 221 aaKnown RBP eCLIP3.99□□□□□ -1.77
PTPRD-212ENST00000488774 C6orf226Q5I0X4 101 aa3.99□□□□□ -1.77
PTPRD-212ENST00000488774 ZNF625Q96I27 306 aaPredicted RBP3.99□□□□□ -1.77
PTPRD-212ENST00000488774 TRAV12-1A0A0B4J245 112 aa3.98□□□□□ -1.77
PTPRD-212ENST00000488774 F8VRH5 84 aa3.98□□□□□ -1.77
PTPRD-212ENST00000488774 HSBP1O75506 76 aa3.98□□□□□ -1.77
PTPRD-212ENST00000488774 ATP5LO75964 103 aa3.98□□□□□ -1.77
PTPRD-212ENST00000488774 PLA2G1BP04054 148 aaKnown RBP3.98□□□□□ -1.77
PTPRD-212ENST00000488774 G0S2P27469 103 aa3.98□□□□□ -1.77
PTPRD-212ENST00000488774 PAPPA-AS1Q5QFB9 102 aa3.98□□□□□ -1.77
PTPRD-212ENST00000488774 HMCN2Q8NDA2 5059 aa3.98□□□□□ -1.77
PTPRD-212ENST00000488774 KRTAP29-1A8MX34 341 aaPredicted RBP3.97□□□□□ -1.77
PTPRD-212ENST00000488774 CKS1BP61024 79 aa3.97□□□□□ -1.77
PTPRD-212ENST00000488774 TMEM170BQ5T4T1 132 aa3.97□□□□□ -1.77
PTPRD-212ENST00000488774 PACRGQ96M98 296 aaPredicted RBP3.97□□□□□ -1.77
PTPRD-212ENST00000488774 LPAP08519 4548 aa3.97□□□□□ -1.77
PTPRD-212ENST00000488774 A0A0U1RRA0 63 aa3.96□□□□□ -1.78
PTPRD-212ENST00000488774 F8WDY8 70 aa3.96□□□□□ -1.78
PTPRD-212ENST00000488774 M0QXV9 152 aa3.96□□□□□ -1.78
PTPRD-212ENST00000488774 LEPROTL1O95214 131 aa3.96□□□□□ -1.78
PTPRD-212ENST00000488774 PRSS2P07478 247 aa3.96□□□□□ -1.78
PTPRD-212ENST00000488774 S100A1P23297 94 aa3.96□□□□□ -1.78
PTPRD-212ENST00000488774 PFN2P35080 140 aa3.96□□□□□ -1.78
PTPRD-212ENST00000488774 SEC11AP67812 179 aa3.96□□□□□ -1.78
PTPRD-212ENST00000488774 TTTY13Q9BZ97 58 aa3.96□□□□□ -1.78
PTPRD-212ENST00000488774 C22orf24Q9Y442 160 aa3.96□□□□□ -1.78
PTPRD-212ENST00000488774 IGKV2D-26A0A0A0MRZ7 120 aa3.95□□□□□ -1.78
PTPRD-212ENST00000488774 LINC01549A6NIU2 74 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms