RNA–Protein interactions for RNA: ENST00000488298.5

COL1A2-210, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-210ENST00000488298 DPH3Q96FX2 82 aa7.56□□□□□ -1.2
COL1A2-210ENST00000488298 CAMK2N2Q96S95 79 aa7.56□□□□□ -1.2
COL1A2-210ENST00000488298 C2orf88Q9BSF0 95 aa7.56□□□□□ -1.2
COL1A2-210ENST00000488298 MRPL35Q9NZE8 188 aaKnown RBP7.56□□□□□ -1.2
COL1A2-210ENST00000488298 A0A0J9YXV3 536 aa7.55□□□□□ -1.2
COL1A2-210ENST00000488298 TRGC2P03986 189 aa7.55□□□□□ -1.2
COL1A2-210ENST00000488298 PTTG1IPP53801 180 aa7.55□□□□□ -1.2
COL1A2-210ENST00000488298 PAPPA-AS1Q5QFB9 102 aa7.55□□□□□ -1.2
COL1A2-210ENST00000488298 UNQ6190/PRO20217Q6UXQ8 127 aa7.55□□□□□ -1.2
COL1A2-210ENST00000488298 CST9LQ9H4G1 147 aa7.55□□□□□ -1.2
COL1A2-210ENST00000488298 C6orf48Q9UBA6 75 aa7.55□□□□□ -1.2
COL1A2-210ENST00000488298 CDKN2A-AS1Q9UH64 79 aa7.55□□□□□ -1.2
COL1A2-210ENST00000488298 IGKV2-24A0A0C4DH68 120 aa7.54□□□□□ -1.2
COL1A2-210ENST00000488298 LOC107984640A0A0U1RRK4 108 aa7.54□□□□□ -1.2
COL1A2-210ENST00000488298 TLX1NBP0CAT3 122 aa7.54□□□□□ -1.2
COL1A2-210ENST00000488298 MAJINQ3KP22 176 aa7.54□□□□□ -1.2
COL1A2-210ENST00000488298 TINCRA0A1B0GVN0 87 aa7.53□□□□□ -1.2
COL1A2-210ENST00000488298 HERVK_113P63121 156 aa7.53□□□□□ -1.2
COL1A2-210ENST00000488298 STPG4Q8N801 248 aa7.53□□□□□ -1.2
COL1A2-210ENST00000488298 SMIM1B2RUZ4 78 aa7.52□□□□□ -1.21
COL1A2-210ENST00000488298 NDUFA1O15239 70 aa7.52□□□□□ -1.21
COL1A2-210ENST00000488298 LINC00310P59036 64 aa7.52□□□□□ -1.21
COL1A2-210ENST00000488298 SEC11AP67812 179 aa7.52□□□□□ -1.21
COL1A2-210ENST00000488298 PMVKQ15126 192 aa7.52□□□□□ -1.21
COL1A2-210ENST00000488298 PMCHL1Q16048 86 aa7.52□□□□□ -1.21
COL1A2-210ENST00000488298 ANKRD39Q53RE8 183 aa7.52□□□□□ -1.21
COL1A2-210ENST00000488298 C2orf82Q6UX34 121 aa7.52□□□□□ -1.21
COL1A2-210ENST00000488298 CHCHD1Q96BP2 118 aaKnown RBP7.52□□□□□ -1.21
COL1A2-210ENST00000488298 LINC00474Q9P2X8 69 aa7.52□□□□□ -1.21
COL1A2-210ENST00000488298 PKIGQ9Y2B9 76 aa7.52□□□□□ -1.21
COL1A2-210ENST00000488298 A0A1W2PNN7 141 aa7.51□□□□□ -1.21
COL1A2-210ENST00000488298 HBDP02042 147 aa7.51□□□□□ -1.21
COL1A2-210ENST00000488298 Q6ZRP5 223 aa7.51□□□□□ -1.21
COL1A2-210ENST00000488298 BAGE3Q86Y29 109 aa7.51□□□□□ -1.21
COL1A2-210ENST00000488298 KRTAP7-1Q8IUC3 87 aa7.51□□□□□ -1.21
COL1A2-210ENST00000488298 Q8IZM0 81 aa7.51□□□□□ -1.21
COL1A2-210ENST00000488298 IGLC3P0DOY3 106 aa7.5□□□□□ -1.21
COL1A2-210ENST00000488298 TNXBP22105 4242 aa7.49□□□□□ -1.21
COL1A2-210ENST00000488298 TRBV30A0A0K0K1B3 111 aa7.49□□□□□ -1.21
COL1A2-210ENST00000488298 HSBP1O75506 76 aa7.49□□□□□ -1.21
COL1A2-210ENST00000488298 GAGE2BQ13066 116 aa7.49□□□□□ -1.21
COL1A2-210ENST00000488298 C9orf116Q5BN46 136 aaPredicted RBP7.48□□□□□ -1.21
COL1A2-210ENST00000488298 C7orf33Q8WU49 177 aa7.48□□□□□ -1.21
COL1A2-210ENST00000488298 GEMIN7Q9H840 131 aaKnown RBP7.48□□□□□ -1.21
COL1A2-210ENST00000488298 IGLV5-39A0A0G2JS06 123 aa7.47□□□□□ -1.21
COL1A2-210ENST00000488298 LINC00469Q8N7U9 141 aa7.47□□□□□ -1.21
COL1A2-210ENST00000488298 HIST1H2BKO60814 126 aa7.46□□□□□ -1.22
COL1A2-210ENST00000488298 ATP5LO75964 103 aa7.46□□□□□ -1.22
COL1A2-210ENST00000488298 HIST1H2BJP06899 126 aa7.46□□□□□ -1.22
COL1A2-210ENST00000488298 ZNF22P17026 224 aaPredicted RBP7.46□□□□□ -1.22
COL1A2-210ENST00000488298 HIST1H2BOP23527 126 aa7.46□□□□□ -1.22
COL1A2-210ENST00000488298 HIST1H2BBP33778 126 aa7.46□□□□□ -1.22
COL1A2-210ENST00000488298 HIST1H2BDP58876 126 aa7.46□□□□□ -1.22
COL1A2-210ENST00000488298 HIST1H2BCP62807 126 aa7.46□□□□□ -1.22
COL1A2-210ENST00000488298 RPL18AQ02543 176 aaKnown RBP7.46□□□□□ -1.22
COL1A2-210ENST00000488298 HIST2H2BEQ16778 126 aa7.46□□□□□ -1.22
COL1A2-210ENST00000488298 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.46□□□□□ -1.22
COL1A2-210ENST00000488298 C9orf129Q5T035 196 aaKnown RBP7.46□□□□□ -1.22
COL1A2-210ENST00000488298 HIST1H2BHQ93079 126 aa7.46□□□□□ -1.22
COL1A2-210ENST00000488298 HIST1H2BNQ99877 126 aa7.46□□□□□ -1.22
COL1A2-210ENST00000488298 HIST1H2BMQ99879 126 aa7.46□□□□□ -1.22
COL1A2-210ENST00000488298 FAM168BA1KXE4 195 aa7.45□□□□□ -1.22
COL1A2-210ENST00000488298 NDUFC2-KCTD14E9PQ53 114 aa7.45□□□□□ -1.22
COL1A2-210ENST00000488298 NUPR1O60356 82 aa7.45□□□□□ -1.22
COL1A2-210ENST00000488298 SERF1AO75920 110 aa7.45□□□□□ -1.22
COL1A2-210ENST00000488298 PRR3P79522 188 aaKnown RBP7.45□□□□□ -1.22
COL1A2-210ENST00000488298 C6orf226Q5I0X4 101 aa7.45□□□□□ -1.22
COL1A2-210ENST00000488298 KRTAP11-1Q8IUC1 163 aa7.45□□□□□ -1.22
COL1A2-210ENST00000488298 TOMM7Q9P0U1 55 aa7.45□□□□□ -1.22
COL1A2-210ENST00000488298 TRAV12-1A0A0B4J245 112 aa7.44□□□□□ -1.22
COL1A2-210ENST00000488298 C11orf86A6NJI1 115 aa7.44□□□□□ -1.22
COL1A2-210ENST00000488298 F8VRH5 84 aa7.44□□□□□ -1.22
COL1A2-210ENST00000488298 SPINK8P0C7L1 97 aa7.44□□□□□ -1.22
COL1A2-210ENST00000488298 FAM19A2Q8N3H0 131 aa7.44□□□□□ -1.22
COL1A2-210ENST00000488298 COX7B2Q8TF08 81 aa7.44□□□□□ -1.22
COL1A2-210ENST00000488298 LINC01600Q96MT4 127 aa7.44□□□□□ -1.22
COL1A2-210ENST00000488298 KRTAP9-2Q9BYQ4 174 aa7.44□□□□□ -1.22
COL1A2-210ENST00000488298 PRSS2P07478 247 aa7.43□□□□□ -1.22
COL1A2-210ENST00000488298 SRSF9Q13242 221 aaKnown RBP eCLIP7.43□□□□□ -1.22
COL1A2-210ENST00000488298 PHF5AQ7RTV0 110 aaKnown RBP7.43□□□□□ -1.22
COL1A2-210ENST00000488298 IFI27L1Q96BM0 104 aa7.43□□□□□ -1.22
COL1A2-210ENST00000488298 PACRGQ96M98 296 aaPredicted RBP7.43□□□□□ -1.22
COL1A2-210ENST00000488298 CXCL5P42830 114 aa7.42□□□□□ -1.22
COL1A2-210ENST00000488298 CKS1BP61024 79 aa7.42□□□□□ -1.22
COL1A2-210ENST00000488298 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.41□□□□□ -1.22
COL1A2-210ENST00000488298 NDUFA6P56556 154 aa7.41□□□□□ -1.22
COL1A2-210ENST00000488298 ODF1Q14990 250 aa7.41□□□□□ -1.22
COL1A2-210ENST00000488298 GAGE2EQ4V326 116 aa7.41□□□□□ -1.22
COL1A2-210ENST00000488298 GAGE2DQ9UEU5 116 aa7.41□□□□□ -1.22
COL1A2-210ENST00000488298 HSPB8Q9UJY1 196 aa7.41□□□□□ -1.22
COL1A2-210ENST00000488298 H3BRM9 83 aa7.4□□□□□ -1.22
COL1A2-210ENST00000488298 LEPROTL1O95214 131 aa7.4□□□□□ -1.22
COL1A2-210ENST00000488298 KRTAP4-12Q9BQ66 201 aa7.4□□□□□ -1.22
COL1A2-210ENST00000488298 PSORS1C2Q9UIG4 136 aa7.4□□□□□ -1.22
COL1A2-210ENST00000488298 CHTOPQ9Y3Y2 248 aaKnown RBP7.4□□□□□ -1.22
COL1A2-210ENST00000488298 KRTAP9-6A0A140TA67 174 aa7.39□□□□□ -1.23
COL1A2-210ENST00000488298 TMEM223A0PJW6 202 aa7.39□□□□□ -1.23
COL1A2-210ENST00000488298 COA6Q5JTJ3 125 aaKnown RBP7.39□□□□□ -1.23
COL1A2-210ENST00000488298 KRTAP10-8P60410 259 aa7.38□□□□□ -1.23
COL1A2-210ENST00000488298 REG3GQ6UW15 175 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms