RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 NMBP08949 121 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 PYYP10082 97 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 IFITM1P13164 125 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 CSN1S1P47710 185 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 ZNF80P51504 273 aaPredicted RBP2.03□□□□□ -2.08
GPNMB-212ENST00000487890 IQCJQ1A5X6 159 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 LGALS9BQ3B8N2 356 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 C9orf153Q5TBE3 101 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 Q6AWC8 147 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 SLC25A34Q6PIV7 304 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 KCNRGQ8N5I3 272 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 Q8N9L7 120 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 TMEM263Q8WUH6 116 aaKnown RBP2.03□□□□□ -2.08
GPNMB-212ENST00000487890 S100ZQ8WXG8 99 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 DPH3Q96FX2 82 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 HYLS1Q96M11 299 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 YPEL4Q96NS1 127 aa2.03□□□□□ -2.08
GPNMB-212ENST00000487890 FLG2Q5D862 2391 aaPredicted RBP2.03□□□□□ -2.08
GPNMB-212ENST00000487890 DNAH2Q9P225 4427 aa2.03□□□□□ -2.09
GPNMB-212ENST00000487890 FAT2Q9NYQ8 4349 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 TRBV20-1A0A075B6N2 111 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 A0A096LPF7 62 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 A0A0D9SG52 128 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 NBDYA0A0U1RRE5 68 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 A0A1B0GVY2 172 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 GRIFINA4D1Z8 144 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 M0R378 163 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 SLC25A5P05141 298 aaKnown RBP2.02□□□□□ -2.09
GPNMB-212ENST00000487890 IGLC2P0DOY2 106 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 FABP4P15090 132 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 TMEM258P61165 79 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 UBE2L3P68036 154 aaKnown RBP2.02□□□□□ -2.09
GPNMB-212ENST00000487890 LINC00299Q6ZSB3 139 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 Q6ZTI0 123 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 LCA10Q71F78 164 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 MIR17HGQ75NE6 70 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 Q8TAT8 98 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 SCGB1C1Q8TD33 95 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 TOMM6Q96B49 74 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 SEC11CQ9BY50 192 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 NPCDR1Q9BY65 106 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 IMUPQ9GZP8 106 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 SMCO4Q9NRQ5 59 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 LINC00588Q9Y4M8 146 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 PKD1P98161 4303 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 DMBT1Q9UGM3 2413 aaPredicted RBP2.02□□□□□ -2.09
GPNMB-212ENST00000487890 HERC2O95714 4834 aa2.02□□□□□ -2.09
GPNMB-212ENST00000487890 VPS13BQ7Z7G8 4022 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 TRAV13-1A0A0B4J241 112 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 TRGV4A0A0C4DH28 118 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 IGHV1-58A0A0C4DH39 117 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 TRBV7-6A0A0J9YX20 115 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 A8MWV9 139 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 C17orf112F2Z3M2 114 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 H3BMG7 143 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 UBE2L6O14933 153 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 SCGB1C2P0DMR2 95 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 TAS2R45P59539 299 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 PDE6HQ13956 83 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 SPATA12Q7Z6I5 190 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 ATOH7Q8N100 152 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 CMTM2Q8TAZ6 248 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 PPP1R1CQ8WVI7 109 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 ODF3Q96PU9 254 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 HIST1H2BLQ99880 126 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 NMES1Q9C002 83 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 AGPAT4-IT1Q9H0P7 198 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 C11orf1Q9H5F2 150 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 TMEM14CQ9P0S9 112 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 KLK12Q9UKR0 248 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 ICOSQ9Y6W8 199 aa2.01□□□□□ -2.09
GPNMB-212ENST00000487890 K7EP34 96 aa2□□□□□ -2.09
GPNMB-212ENST00000487890 SFTA3P0C7M3 94 aa2□□□□□ -2.09
GPNMB-212ENST00000487890 LGALS3P17931 250 aaKnown RBP2□□□□□ -2.09
GPNMB-212ENST00000487890 FUSP35637 526 aaKnown RBP eCLIP2□□□□□ -2.09
GPNMB-212ENST00000487890 ESRGQ1W209 222 aa2□□□□□ -2.09
GPNMB-212ENST00000487890 PRR9Q5T870 116 aa2□□□□□ -2.09
GPNMB-212ENST00000487890 EIF5AL1Q6IS14 154 aaKnown RBP2□□□□□ -2.09
GPNMB-212ENST00000487890 Q6ZQT7 251 aa2□□□□□ -2.09
GPNMB-212ENST00000487890 ZFAND2AQ8N6M9 145 aa2□□□□□ -2.09
GPNMB-212ENST00000487890 SPANXA2-OT1Q8N9U9 137 aa2□□□□□ -2.09
GPNMB-212ENST00000487890 FAM167A-AS1Q96KT0 104 aa2□□□□□ -2.09
GPNMB-212ENST00000487890 ZNF492Q9P255 531 aa2□□□□□ -2.09
GPNMB-212ENST00000487890 HHLA3Q9XRX5 114 aa2□□□□□ -2.09
GPNMB-212ENST00000487890 MRPS16Q9Y3D3 137 aaKnown RBP2□□□□□ -2.09
GPNMB-212ENST00000487890 DYNC1H1Q14204 4646 aaKnown RBP2□□□□□ -2.09
GPNMB-212ENST00000487890 HSPG2P98160 4391 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 DNAH11Q96DT5 4516 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 FXYD6-FXYD2A0A087WZ82 144 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 C9JCJ5 164 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 PSCAO43653 123 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 SPINK4O60575 86 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 ZNF324O75467 553 aaPredicted RBP1.99□□□□□ -2.09
GPNMB-212ENST00000487890 LTAP01374 205 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 ARL14EPLP0DKL9 152 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 TPT1P13693 172 aaKnown RBP1.99□□□□□ -2.09
GPNMB-212ENST00000487890 LINC00315P59091 139 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 EIF5AP63241 154 aaKnown RBP1.99□□□□□ -2.09
GPNMB-212ENST00000487890 HBBP68871 147 aa1.99□□□□□ -2.09
GPNMB-212ENST00000487890 C10orf91Q5T1B1 145 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms