RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 NUP188Q5SRE5 1749 aa0.67□□□□□ -2.3
HMGB1P36-201ENST00000487709 SETBP1Q9Y6X0 1596 aa0.67□□□□□ -2.3
HMGB1P36-201ENST00000487709 H3BUT2 72 aa0.67□□□□□ -2.3
HMGB1P36-201ENST00000487709 ERICH3Q5RHP9 1530 aa0.67□□□□□ -2.3
HMGB1P36-201ENST00000487709 KCPQ6ZWJ8 1503 aa0.67□□□□□ -2.3
HMGB1P36-201ENST00000487709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.67□□□□□ -2.3
HMGB1P36-201ENST00000487709 CCDC141Q6ZP82 1450 aa0.67□□□□□ -2.3
HMGB1P36-201ENST00000487709 CLIP1P30622 1438 aa0.66□□□□□ -2.3
HMGB1P36-201ENST00000487709 ABCC1P33527 1531 aa0.66□□□□□ -2.3
HMGB1P36-201ENST00000487709 LINC00959A0A1B0GUT2 108 aa0.66□□□□□ -2.3
HMGB1P36-201ENST00000487709 BVES-AS1Q5T3Y7 98 aa0.66□□□□□ -2.3
HMGB1P36-201ENST00000487709 Q8IZM0 81 aa0.66□□□□□ -2.3
HMGB1P36-201ENST00000487709 XRN1Q8IZH2 1706 aaKnown RBP0.66□□□□□ -2.3
HMGB1P36-201ENST00000487709 ABCA1O95477 2261 aa0.66□□□□□ -2.3
HMGB1P36-201ENST00000487709 SAMD9Q5K651 1589 aa0.66□□□□□ -2.3
HMGB1P36-201ENST00000487709 RGPD4Q7Z3J3 1758 aa0.65□□□□□ -2.3
HMGB1P36-201ENST00000487709 F5P12259 2224 aa0.65□□□□□ -2.3
HMGB1P36-201ENST00000487709 TULP4Q9NRJ4 1543 aa0.65□□□□□ -2.31
HMGB1P36-201ENST00000487709 KNDC1Q76NI1 1749 aa0.65□□□□□ -2.31
HMGB1P36-201ENST00000487709 FXYD6-FXYD2A0A087WZ82 144 aa0.65□□□□□ -2.31
HMGB1P36-201ENST00000487709 I3L2K1 104 aa0.65□□□□□ -2.31
HMGB1P36-201ENST00000487709 NDUFB1O75438 58 aa0.65□□□□□ -2.31
HMGB1P36-201ENST00000487709 DEFB112Q30KQ8 113 aa0.65□□□□□ -2.31
HMGB1P36-201ENST00000487709 USMG5Q96IX5 58 aa0.65□□□□□ -2.31
HMGB1P36-201ENST00000487709 BTAF1O14981 1849 aa0.65□□□□□ -2.31
HMGB1P36-201ENST00000487709 ATP7BP35670 1465 aa0.65□□□□□ -2.31
HMGB1P36-201ENST00000487709 PPLO60437 1756 aa0.65□□□□□ -2.31
HMGB1P36-201ENST00000487709 KDM3BQ7LBC6 1761 aa0.65□□□□□ -2.31
HMGB1P36-201ENST00000487709 USP24Q9UPU5 2620 aa0.65□□□□□ -2.31
HMGB1P36-201ENST00000487709 EEA1Q15075 1411 aa0.64□□□□□ -2.31
HMGB1P36-201ENST00000487709 ANKARQ7Z5J8 1434 aa0.64□□□□□ -2.31
HMGB1P36-201ENST00000487709 MAP3K1Q13233 1512 aa0.64□□□□□ -2.31
HMGB1P36-201ENST00000487709 TARBP1Q13395 1621 aaKnown RBP0.64□□□□□ -2.31
HMGB1P36-201ENST00000487709 A0A0G2JMZ2 1700 aa0.64□□□□□ -2.31
HMGB1P36-201ENST00000487709 SUPT6HQ7KZ85 1726 aaKnown RBP0.64□□□□□ -2.31
HMGB1P36-201ENST00000487709 MED13LQ71F56 2210 aa0.64□□□□□ -2.31
HMGB1P36-201ENST00000487709 MEGF8Q7Z7M0 2845 aa0.64□□□□□ -2.31
HMGB1P36-201ENST00000487709 SMIM31A0A1B0GVY4 71 aa0.64□□□□□ -2.31
HMGB1P36-201ENST00000487709 ATP5EP2Q5VTU8 51 aa0.64□□□□□ -2.31
HMGB1P36-201ENST00000487709 DEFB123Q8N688 67 aa0.64□□□□□ -2.31
HMGB1P36-201ENST00000487709 C18orf32Q8TCD1 76 aa0.64□□□□□ -2.31
HMGB1P36-201ENST00000487709 SHPRHQ149N8 1683 aa0.64□□□□□ -2.31
HMGB1P36-201ENST00000487709 PDCD11Q14690 1871 aaKnown RBP0.64□□□□□ -2.31
HMGB1P36-201ENST00000487709 ZNF462Q96JM2 2506 aa0.64□□□□□ -2.31
HMGB1P36-201ENST00000487709 DOCK11Q5JSL3 2073 aa0.63□□□□□ -2.31
HMGB1P36-201ENST00000487709 RGPD3A6NKT7 1758 aaPredicted RBP0.63□□□□□ -2.31
HMGB1P36-201ENST00000487709 C5P01031 1676 aa0.63□□□□□ -2.31
HMGB1P36-201ENST00000487709 DIP2BQ9P265 1576 aa0.63□□□□□ -2.31
HMGB1P36-201ENST00000487709 KRTAP19-3Q7Z4W3 81 aa0.63□□□□□ -2.31
HMGB1P36-201ENST00000487709 SMCO4Q9NRQ5 59 aa0.63□□□□□ -2.31
HMGB1P36-201ENST00000487709 NKTRP30414 1462 aaKnown RBP0.62□□□□□ -2.31
HMGB1P36-201ENST00000487709 A0A087WXM4 84 aa0.62□□□□□ -2.31
HMGB1P36-201ENST00000487709 SPTY2D1-AS1A0A0U1RR47 76 aa0.62□□□□□ -2.31
HMGB1P36-201ENST00000487709 CFDP00746 253 aaPredicted RBP0.62□□□□□ -2.31
HMGB1P36-201ENST00000487709 SMIM13P0DJ93 91 aa0.62□□□□□ -2.31
HMGB1P36-201ENST00000487709 COX8AP10176 69 aa0.62□□□□□ -2.31
HMGB1P36-201ENST00000487709 RPL38P63173 70 aaKnown RBP0.62□□□□□ -2.31
HMGB1P36-201ENST00000487709 DEFA5Q01523 94 aa0.62□□□□□ -2.31
HMGB1P36-201ENST00000487709 DEFB121Q5J5C9 76 aa0.62□□□□□ -2.31
HMGB1P36-201ENST00000487709 GAFA1Q96PS6 74 aa0.62□□□□□ -2.31
HMGB1P36-201ENST00000487709 CRIPTQ9P021 101 aa0.62□□□□□ -2.31
HMGB1P36-201ENST00000487709 LAMC1P11047 1609 aa0.62□□□□□ -2.31
HMGB1P36-201ENST00000487709 KNTC1P50748 2209 aa0.62□□□□□ -2.31
HMGB1P36-201ENST00000487709 URB2Q14146 1524 aaKnown RBP0.62□□□□□ -2.31
HMGB1P36-201ENST00000487709 ZFHX3Q15911 3703 aa0.62□□□□□ -2.31
HMGB1P36-201ENST00000487709 CFAP74Q9C0B2 1584 aa0.62□□□□□ -2.31
HMGB1P36-201ENST00000487709 WNK3Q9BYP7 1800 aa0.61□□□□□ -2.31
HMGB1P36-201ENST00000487709 NCOA2Q15596 1464 aa0.61□□□□□ -2.31
HMGB1P36-201ENST00000487709 ANKRD17O75179 2603 aaKnown RBP0.61□□□□□ -2.31
HMGB1P36-201ENST00000487709 PAPPAQ13219 1627 aa0.61□□□□□ -2.31
HMGB1P36-201ENST00000487709 ALKQ9UM73 1620 aa0.61□□□□□ -2.31
HMGB1P36-201ENST00000487709 PDCD5O14737 125 aa0.61□□□□□ -2.31
HMGB1P36-201ENST00000487709 COX6B1P14854 86 aa0.61□□□□□ -2.31
HMGB1P36-201ENST00000487709 WFDC9Q8NEX5 89 aa0.61□□□□□ -2.31
HMGB1P36-201ENST00000487709 S100ZQ8WXG8 99 aa0.61□□□□□ -2.31
HMGB1P36-201ENST00000487709 UBR1Q8IWV7 1749 aa0.61□□□□□ -2.31
HMGB1P36-201ENST00000487709 CCDC88BA6NC98 1476 aa0.61□□□□□ -2.31
HMGB1P36-201ENST00000487709 KIAA0556O60303 1618 aa0.6□□□□□ -2.31
HMGB1P36-201ENST00000487709 NHSL1Q5SYE7 1610 aa0.6□□□□□ -2.31
HMGB1P36-201ENST00000487709 TRAV21A0A0B4J279 112 aa0.6□□□□□ -2.31
HMGB1P36-201ENST00000487709 UMAD1C9J7I0 102 aa0.6□□□□□ -2.31
HMGB1P36-201ENST00000487709 I3L3M4 83 aa0.6□□□□□ -2.31
HMGB1P36-201ENST00000487709 K7EQZ3 153 aa0.6□□□□□ -2.31
HMGB1P36-201ENST00000487709 IFI27P40305 119 aaPredicted RBP0.6□□□□□ -2.31
HMGB1P36-201ENST00000487709 DNMBPQ6XZF7 1577 aa0.6□□□□□ -2.31
HMGB1P36-201ENST00000487709 CRYBG1Q9Y4K1 1723 aa0.6□□□□□ -2.31
HMGB1P36-201ENST00000487709 LRRC7Q96NW7 1537 aa0.59□□□□□ -2.31
HMGB1P36-201ENST00000487709 CACNA1EQ15878 2313 aa0.59□□□□□ -2.31
HMGB1P36-201ENST00000487709 LRRC37AA6NMS7 1700 aa0.59□□□□□ -2.31
HMGB1P36-201ENST00000487709 ADAMTS12P58397 1594 aa0.59□□□□□ -2.31
HMGB1P36-201ENST00000487709 INO80Q9ULG1 1556 aaPredicted RBP0.59□□□□□ -2.31
HMGB1P36-201ENST00000487709 HFM1A2PYH4 1435 aa0.59□□□□□ -2.31
HMGB1P36-201ENST00000487709 NAV3Q8IVL0 2385 aa0.59□□□□□ -2.31
HMGB1P36-201ENST00000487709 COX7BP24311 80 aa0.59□□□□□ -2.31
HMGB1P36-201ENST00000487709 SPINK6Q6UWN8 80 aa0.59□□□□□ -2.31
HMGB1P36-201ENST00000487709 FAM208BQ5VWN6 2430 aa0.59□□□□□ -2.32
HMGB1P36-201ENST00000487709 TMEM131LA2VDJ0 1609 aa0.59□□□□□ -2.32
HMGB1P36-201ENST00000487709 MROH1Q8NDA8 1641 aa0.59□□□□□ -2.32
HMGB1P36-201ENST00000487709 PTPN23Q9H3S7 1636 aa0.59□□□□□ -2.32
HMGB1P36-201ENST00000487709 SLIT1O75093 1534 aa0.59□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms