RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 hADV29S1A0JD25 119 aa8.32□□□□□ -1.08
TRA2B-214ENST00000487615 DMXL1Q9Y485 3027 aa8.31□□□□□ -1.08
TRA2B-214ENST00000487615 COX7BP24311 80 aa8.31□□□□□ -1.08
TRA2B-214ENST00000487615 DEFB105AQ8NG35 78 aa8.31□□□□□ -1.08
TRA2B-214ENST00000487615 B5MCH6 92 aa8.31□□□□□ -1.08
TRA2B-214ENST00000487615 XGP55808 180 aa8.3□□□□□ -1.08
TRA2B-214ENST00000487615 RPL28P46779 137 aaKnown RBP8.3□□□□□ -1.08
TRA2B-214ENST00000487615 IGHV3OR16-9A0A0B4J2B5 98 aa8.3□□□□□ -1.08
TRA2B-214ENST00000487615 MUC7Q8TAX7 377 aa8.29□□□□□ -1.08
TRA2B-214ENST00000487615 CYSRT1A8MQ03 144 aa8.29□□□□□ -1.08
TRA2B-214ENST00000487615 ATMQ13315 3056 aa8.29□□□□□ -1.08
TRA2B-214ENST00000487615 UBE2BP63146 152 aa8.29□□□□□ -1.08
TRA2B-214ENST00000487615 KRTAP1-3Q8IUG1 177 aa8.29□□□□□ -1.08
TRA2B-214ENST00000487615 LOC400499M0QZD8 3231 aa8.29□□□□□ -1.08
TRA2B-214ENST00000487615 TRAV10A0A0B4J240 114 aa8.28□□□□□ -1.08
TRA2B-214ENST00000487615 RETNQ9HD89 108 aa8.28□□□□□ -1.08
TRA2B-214ENST00000487615 HELZ2Q9BYK8 2649 aaKnown RBP8.28□□□□□ -1.08
TRA2B-214ENST00000487615 UNQ6190/PRO20217Q6UXQ8 127 aa8.28□□□□□ -1.08
TRA2B-214ENST00000487615 SYCNQ0VAF6 134 aa8.27□□□□□ -1.08
TRA2B-214ENST00000487615 PDE6GP18545 87 aa8.27□□□□□ -1.09
TRA2B-214ENST00000487615 X6R8D5 127 aa8.27□□□□□ -1.09
TRA2B-214ENST00000487615 ATOX1O00244 68 aa8.27□□□□□ -1.09
TRA2B-214ENST00000487615 A0A0J9YWU9 116 aa8.27□□□□□ -1.09
TRA2B-214ENST00000487615 NDUFV3P56181 108 aaKnown RBP8.27□□□□□ -1.09
TRA2B-214ENST00000487615 NANOS2P60321 138 aaKnown RBP8.26□□□□□ -1.09
TRA2B-214ENST00000487615 C9orf116Q5BN46 136 aaPredicted RBP8.26□□□□□ -1.09
TRA2B-214ENST00000487615 PRO0461Q9UI25 63 aa8.26□□□□□ -1.09
TRA2B-214ENST00000487615 M0QXV9 152 aa8.25□□□□□ -1.09
TRA2B-214ENST00000487615 FUSP35637 526 aaKnown RBP eCLIP8.25□□□□□ -1.09
TRA2B-214ENST00000487615 LINC01561Q8N1V8 128 aa8.25□□□□□ -1.09
TRA2B-214ENST00000487615 Q6ZTC4 211 aa8.25□□□□□ -1.09
TRA2B-214ENST00000487615 TRAV23DV6A0A075B6W5 121 aa8.25□□□□□ -1.09
TRA2B-214ENST00000487615 A0A1B0GX51 115 aa8.25□□□□□ -1.09
TRA2B-214ENST00000487615 FAM240AA0A1B0GVK7 77 aa8.25□□□□□ -1.09
TRA2B-214ENST00000487615 SMCPP49901 116 aaPredicted RBP8.25□□□□□ -1.09
TRA2B-214ENST00000487615 FLNCQ14315 2725 aa8.24□□□□□ -1.09
TRA2B-214ENST00000487615 CELA1Q9UNI1 258 aa8.24□□□□□ -1.09
TRA2B-214ENST00000487615 SBSPONQ8IVN8 264 aa8.24□□□□□ -1.09
TRA2B-214ENST00000487615 LINC00337Q8N6G1 96 aa8.24□□□□□ -1.09
TRA2B-214ENST00000487615 PKIGQ9Y2B9 76 aa8.23□□□□□ -1.09
TRA2B-214ENST00000487615 Q6ZQY7 126 aa8.23□□□□□ -1.09
TRA2B-214ENST00000487615 CSNK1G2-AS1Q8NCQ2 148 aa8.23□□□□□ -1.09
TRA2B-214ENST00000487615 PRR3P79522 188 aaKnown RBP8.22□□□□□ -1.09
TRA2B-214ENST00000487615 LRBAP50851 2863 aa8.22□□□□□ -1.09
TRA2B-214ENST00000487615 PRB2P02812 416 aaPredicted RBP8.22□□□□□ -1.09
TRA2B-214ENST00000487615 LYPD5Q6UWN5 251 aa8.22□□□□□ -1.09
TRA2B-214ENST00000487615 LITAFQ99732 161 aa8.22□□□□□ -1.09
TRA2B-214ENST00000487615 IL17DQ8TAD2 202 aa8.22□□□□□ -1.09
TRA2B-214ENST00000487615 SOSTDC1Q6X4U4 206 aa8.21□□□□□ -1.09
TRA2B-214ENST00000487615 M0R378 163 aa8.21□□□□□ -1.09
TRA2B-214ENST00000487615 NDUFC2O95298 119 aa8.21□□□□□ -1.09
TRA2B-214ENST00000487615 SDIM1Q6ZPB5 146 aa8.21□□□□□ -1.09
TRA2B-214ENST00000487615 C19orf73Q9NVV2 129 aa8.21□□□□□ -1.09
TRA2B-214ENST00000487615 KLK5Q9Y337 293 aaPredicted RBP8.21□□□□□ -1.09
TRA2B-214ENST00000487615 CR1P17927 2039 aa8.21□□□□□ -1.1
TRA2B-214ENST00000487615 KALRNO60229 2985 aa8.21□□□□□ -1.1
TRA2B-214ENST00000487615 A0A087WYN8 130 aa8.21□□□□□ -1.1
TRA2B-214ENST00000487615 GIG44P09565 113 aaPredicted RBP8.21□□□□□ -1.1
TRA2B-214ENST00000487615 NREPQ16612 68 aa8.21□□□□□ -1.1
TRA2B-214ENST00000487615 EGFEM1PQ0D2K5 195 aa8.2□□□□□ -1.1
TRA2B-214ENST00000487615 IMUPQ9GZP8 106 aa8.2□□□□□ -1.1
TRA2B-214ENST00000487615 SS18L2Q9UHA2 77 aa8.2□□□□□ -1.1
TRA2B-214ENST00000487615 ATRQ13535 2644 aa8.2□□□□□ -1.1
TRA2B-214ENST00000487615 WFDC10BQ8IUB3 73 aa8.19□□□□□ -1.1
TRA2B-214ENST00000487615 C6orf223Q8N319 242 aa8.19□□□□□ -1.1
TRA2B-214ENST00000487615 IGKV2-24A0A0C4DH68 120 aa8.19□□□□□ -1.1
TRA2B-214ENST00000487615 ZNF73O43830 326 aaPredicted RBP8.19□□□□□ -1.1
TRA2B-214ENST00000487615 KRTAP1-1Q07627 177 aa8.19□□□□□ -1.1
TRA2B-214ENST00000487615 Q8N814 137 aa8.18□□□□□ -1.1
TRA2B-214ENST00000487615 C14orf177Q52M58 125 aa8.18□□□□□ -1.1
TRA2B-214ENST00000487615 ATP5EP2Q5VTU8 51 aa8.18□□□□□ -1.1
TRA2B-214ENST00000487615 COL12A1Q99715 3063 aa8.18□□□□□ -1.1
TRA2B-214ENST00000487615 CDIP1Q9H305 208 aa8.17□□□□□ -1.1
TRA2B-214ENST00000487615 PLAC8L1A1L4L8 177 aa8.17□□□□□ -1.1
TRA2B-214ENST00000487615 IGKV2-28A0A075B6P5 120 aa8.17□□□□□ -1.1
TRA2B-214ENST00000487615 TRBV10-3A0A0K0K1G6 114 aa8.17□□□□□ -1.1
TRA2B-214ENST00000487615 IGKV2D-28P01615 120 aa8.17□□□□□ -1.1
TRA2B-214ENST00000487615 Q6Q795 121 aa8.17□□□□□ -1.1
TRA2B-214ENST00000487615 FAM19A3Q7Z5A8 133 aa8.16□□□□□ -1.1
TRA2B-214ENST00000487615 Q8NAQ8 132 aa8.16□□□□□ -1.1
TRA2B-214ENST00000487615 TACC2O95359 2948 aa8.15□□□□□ -1.1
TRA2B-214ENST00000487615 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.15□□□□□ -1.11
TRA2B-214ENST00000487615 FAM19A5Q7Z5A7 132 aaPredicted RBP8.15□□□□□ -1.11
TRA2B-214ENST00000487615 WFDC9Q8NEX5 89 aa8.15□□□□□ -1.11
TRA2B-214ENST00000487615 UPK3BQ9BT76 320 aa8.15□□□□□ -1.11
TRA2B-214ENST00000487615 CDK2AP2O75956 126 aa8.14□□□□□ -1.11
TRA2B-214ENST00000487615 TEX15Q9BXT5 2789 aa8.14□□□□□ -1.11
TRA2B-214ENST00000487615 KRTAP10-3P60369 221 aa8.13□□□□□ -1.11
TRA2B-214ENST00000487615 NDUFC2-KCTD14E9PQ53 114 aa8.13□□□□□ -1.11
TRA2B-214ENST00000487615 UBE2AP49459 152 aa8.13□□□□□ -1.11
TRA2B-214ENST00000487615 ZZEF1O43149 2961 aa8.13□□□□□ -1.11
TRA2B-214ENST00000487615 UQCRQO14949 82 aa8.13□□□□□ -1.11
TRA2B-214ENST00000487615 ENHOQ6UWT2 76 aa8.13□□□□□ -1.11
TRA2B-214ENST00000487615 Q8N3U1 123 aa8.12□□□□□ -1.11
TRA2B-214ENST00000487615 C2orf48Q96LS8 159 aa8.12□□□□□ -1.11
TRA2B-214ENST00000487615 HIGD2AQ9BW72 106 aa8.12□□□□□ -1.11
TRA2B-214ENST00000487615 CCKP06307 115 aa8.12□□□□□ -1.11
TRA2B-214ENST00000487615 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
TRA2B-214ENST00000487615 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.11□□□□□ -1.11
TRA2B-214ENST00000487615 SMIM20Q8N5G0 67 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms