RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 FAM168BA1KXE4 195 aa7.07□□□□□ -1.28
SPEN-205ENST00000487496 SEC11AP67812 179 aa7.07□□□□□ -1.28
SPEN-205ENST00000487496 FABP9Q0Z7S8 132 aa7.07□□□□□ -1.28
SPEN-205ENST00000487496 GAGE2EQ4V326 116 aa7.07□□□□□ -1.28
SPEN-205ENST00000487496 PACRGQ96M98 296 aaPredicted RBP7.07□□□□□ -1.28
SPEN-205ENST00000487496 GEMIN7Q9H840 131 aaKnown RBP7.07□□□□□ -1.28
SPEN-205ENST00000487496 TOMM7Q9P0U1 55 aa7.07□□□□□ -1.28
SPEN-205ENST00000487496 GAGE2DQ9UEU5 116 aa7.07□□□□□ -1.28
SPEN-205ENST00000487496 CDKN2A-AS1Q9UH64 79 aa7.07□□□□□ -1.28
SPEN-205ENST00000487496 SCGB1D1O95968 90 aa7.06□□□□□ -1.28
SPEN-205ENST00000487496 PRSS2P07478 247 aa7.06□□□□□ -1.28
SPEN-205ENST00000487496 C6orf226Q5I0X4 101 aa7.06□□□□□ -1.28
SPEN-205ENST00000487496 LINC01600Q96MT4 127 aa7.06□□□□□ -1.28
SPEN-205ENST00000487496 PSORS1C2Q9UIG4 136 aa7.06□□□□□ -1.28
SPEN-205ENST00000487496 LINC01549A6NIU2 74 aa7.05□□□□□ -1.28
SPEN-205ENST00000487496 NDUFC2-KCTD14E9PQ53 114 aa7.05□□□□□ -1.28
SPEN-205ENST00000487496 CKS1BP61024 79 aa7.05□□□□□ -1.28
SPEN-205ENST00000487496 FA2HQ7L5A8 372 aa7.05□□□□□ -1.28
SPEN-205ENST00000487496 Q8IZM0 81 aa7.05□□□□□ -1.28
SPEN-205ENST00000487496 TNXBP22105 4242 aa7.05□□□□□ -1.28
SPEN-205ENST00000487496 APOC3P02656 99 aa7.04□□□□□ -1.28
SPEN-205ENST00000487496 FAM19A5Q7Z5A7 132 aaPredicted RBP7.04□□□□□ -1.28
SPEN-205ENST00000487496 KRTAP7-1Q8IUC3 87 aa7.04□□□□□ -1.28
SPEN-205ENST00000487496 CST9LQ9H4G1 147 aa7.04□□□□□ -1.28
SPEN-205ENST00000487496 SMCO4Q9NRQ5 59 aa7.04□□□□□ -1.28
SPEN-205ENST00000487496 TINCRA0A1B0GVN0 87 aa7.03□□□□□ -1.28
SPEN-205ENST00000487496 C1orf137Q5JT78 98 aa7.03□□□□□ -1.28
SPEN-205ENST00000487496 C9orf129Q5T035 196 aaKnown RBP7.03□□□□□ -1.28
SPEN-205ENST00000487496 REG3GQ6UW15 175 aa7.03□□□□□ -1.28
SPEN-205ENST00000487496 KRTAP11-1Q8IUC1 163 aa7.03□□□□□ -1.28
SPEN-205ENST00000487496 LINC00469Q8N7U9 141 aa7.03□□□□□ -1.28
SPEN-205ENST00000487496 PLA2G2DQ9UNK4 145 aa7.03□□□□□ -1.28
SPEN-205ENST00000487496 TRAPPC1Q9Y5R8 145 aa7.03□□□□□ -1.28
SPEN-205ENST00000487496 HMCN2Q8NDA2 5059 aa7.02□□□□□ -1.28
SPEN-205ENST00000487496 IGLV5-45A0A087WSX0 123 aa7.02□□□□□ -1.29
SPEN-205ENST00000487496 PMVKQ15126 192 aa7.02□□□□□ -1.29
SPEN-205ENST00000487496 SVBPQ8N300 66 aa7.02□□□□□ -1.29
SPEN-205ENST00000487496 SMIM1B2RUZ4 78 aa7.01□□□□□ -1.29
SPEN-205ENST00000487496 F8VRH5 84 aa7.01□□□□□ -1.29
SPEN-205ENST00000487496 SNAPINO95295 136 aa7.01□□□□□ -1.29
SPEN-205ENST00000487496 KRTAP10-8P60410 259 aa7.01□□□□□ -1.29
SPEN-205ENST00000487496 NDUFA5Q16718 116 aa7.01□□□□□ -1.29
SPEN-205ENST00000487496 PDZD11Q5EBL8 140 aa7.01□□□□□ -1.29
SPEN-205ENST00000487496 C18orf32Q8TCD1 76 aa7.01□□□□□ -1.29
SPEN-205ENST00000487496 URB1-AS1Q96HZ7 61 aa7.01□□□□□ -1.29
SPEN-205ENST00000487496 A0A096LNJ9 63 aa7□□□□□ -1.29
SPEN-205ENST00000487496 M0QXV9 152 aa7□□□□□ -1.29
SPEN-205ENST00000487496 IGLV7-43P04211 117 aa7□□□□□ -1.29
SPEN-205ENST00000487496 LINC00614P0C842 121 aa7□□□□□ -1.29
SPEN-205ENST00000487496 CXCL5P42830 114 aa7□□□□□ -1.29
SPEN-205ENST00000487496 SPINK8P0C7L1 97 aa6.99□□□□□ -1.29
SPEN-205ENST00000487496 COX7B2Q8TF08 81 aa6.99□□□□□ -1.29
SPEN-205ENST00000487496 XAGE1AQ9HD64 81 aa6.99□□□□□ -1.29
SPEN-205ENST00000487496 UBE2BP63146 152 aa6.98□□□□□ -1.29
SPEN-205ENST00000487496 H3BRM9 83 aa6.97□□□□□ -1.29
SPEN-205ENST00000487496 HBDP02042 147 aa6.97□□□□□ -1.29
SPEN-205ENST00000487496 IGLC3P0DOY3 106 aa6.97□□□□□ -1.29
SPEN-205ENST00000487496 SMCPP49901 116 aaPredicted RBP6.97□□□□□ -1.29
SPEN-205ENST00000487496 NDUFA6P56556 154 aa6.97□□□□□ -1.29
SPEN-205ENST00000487496 PMCHL1Q16048 86 aa6.97□□□□□ -1.29
SPEN-205ENST00000487496 YPEL4Q96NS1 127 aa6.97□□□□□ -1.29
SPEN-205ENST00000487496 C22orf24Q9Y442 160 aa6.97□□□□□ -1.29
SPEN-205ENST00000487496 RAB5BP61020 215 aa6.96□□□□□ -1.3
SPEN-205ENST00000487496 DIRC1Q969H9 104 aa6.96□□□□□ -1.3
SPEN-205ENST00000487496 IGLV5-39A0A0G2JS06 123 aa6.94□□□□□ -1.3
SPEN-205ENST00000487496 H0Y9J4 135 aa6.94□□□□□ -1.3
SPEN-205ENST00000487496 ATP5LO75964 103 aa6.94□□□□□ -1.3
SPEN-205ENST00000487496 ZNF22P17026 224 aaPredicted RBP6.94□□□□□ -1.3
SPEN-205ENST00000487496 LBHQ53QV2 105 aaPredicted RBP6.94□□□□□ -1.3
SPEN-205ENST00000487496 BAGE3Q86Y29 109 aa6.93□□□□□ -1.3
SPEN-205ENST00000487496 TP73-AS1Q9UF72 201 aa6.93□□□□□ -1.3
SPEN-205ENST00000487496 MRPL55Q7Z7F7 128 aaKnown RBP6.92□□□□□ -1.3
SPEN-205ENST00000487496 C11orf86A6NJI1 115 aa6.91□□□□□ -1.3
SPEN-205ENST00000487496 CBLN2Q8IUK8 224 aa6.91□□□□□ -1.3
SPEN-205ENST00000487496 PRR26Q8N8Z3 221 aa6.91□□□□□ -1.3
SPEN-205ENST00000487496 CHCHD1Q96BP2 118 aaKnown RBP6.91□□□□□ -1.3
SPEN-205ENST00000487496 NUPR1O60356 82 aa6.9□□□□□ -1.3
SPEN-205ENST00000487496 ZNF861PO60384 105 aa6.9□□□□□ -1.3
SPEN-205ENST00000487496 KRTAP1-4P0C5Y4 121 aa6.9□□□□□ -1.3
SPEN-205ENST00000487496 PFN2P35080 140 aa6.9□□□□□ -1.3
SPEN-205ENST00000487496 TMEM170BQ5T4T1 132 aa6.9□□□□□ -1.3
SPEN-205ENST00000487496 LINC00167Q96N53 147 aa6.9□□□□□ -1.3
SPEN-205ENST00000487496 CHTOPQ9Y3Y2 248 aaKnown RBP6.9□□□□□ -1.3
SPEN-205ENST00000487496 UBR4Q5T4S7 5183 aa6.88□□□□□ -1.31
SPEN-205ENST00000487496 IGLV5-37A0A075B6J1 123 aa6.88□□□□□ -1.31
SPEN-205ENST00000487496 GAGE10A6NGK3 116 aa6.88□□□□□ -1.31
SPEN-205ENST00000487496 RPL37AP8A6NKH3 93 aa6.88□□□□□ -1.31
SPEN-205ENST00000487496 IFI27L1Q96BM0 104 aa6.88□□□□□ -1.31
SPEN-205ENST00000487496 ERG28Q9UKR5 140 aa6.88□□□□□ -1.31
SPEN-205ENST00000487496 IGLV1-50A0A075B6I6 118 aa6.87□□□□□ -1.31
SPEN-205ENST00000487496 TRAV12-1A0A0B4J245 112 aa6.87□□□□□ -1.31
SPEN-205ENST00000487496 BCE1O60756 84 aa6.87□□□□□ -1.31
SPEN-205ENST00000487496 COX17Q14061 63 aa6.87□□□□□ -1.31
SPEN-205ENST00000487496 SLC7A5P1Q8MH63 180 aa6.87□□□□□ -1.31
SPEN-205ENST00000487496 FAM19A2Q8N3H0 131 aa6.87□□□□□ -1.31
SPEN-205ENST00000487496 NKAPP1Q8N9T2 125 aa6.87□□□□□ -1.31
SPEN-205ENST00000487496 ZNF625Q96I27 306 aaPredicted RBP6.87□□□□□ -1.31
SPEN-205ENST00000487496 TMEM223A0PJW6 202 aa6.86□□□□□ -1.31
SPEN-205ENST00000487496 HSBP1O75506 76 aa6.86□□□□□ -1.31
SPEN-205ENST00000487496 TRGC2P03986 189 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms