RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 TMEM250H0YL14 139 aa4.84□□□□□ -1.63
HOXA9-204ENST00000487384 CKS2P33552 79 aa4.84□□□□□ -1.63
HOXA9-204ENST00000487384 MRPL55Q7Z7F7 128 aaKnown RBP4.84□□□□□ -1.63
HOXA9-204ENST00000487384 LINC01551Q86U37 167 aa4.84□□□□□ -1.63
HOXA9-204ENST00000487384 SMIM7Q9BQ49 75 aa4.84□□□□□ -1.63
HOXA9-204ENST00000487384 C20orf78Q9BR46 151 aa4.84□□□□□ -1.63
HOXA9-204ENST00000487384 SMIM2Q9BVW6 85 aa4.84□□□□□ -1.63
HOXA9-204ENST00000487384 TRBV24-1A0A075B6N3 115 aa4.83□□□□□ -1.64
HOXA9-204ENST00000487384 GAGE10A6NGK3 116 aa4.83□□□□□ -1.64
HOXA9-204ENST00000487384 PRSS2P07478 247 aa4.83□□□□□ -1.64
HOXA9-204ENST00000487384 LINC01547P58512 204 aaPredicted RBP4.83□□□□□ -1.64
HOXA9-204ENST00000487384 CKS1BP61024 79 aa4.83□□□□□ -1.64
HOXA9-204ENST00000487384 ZC2HC1BQ5TFG8 222 aa4.83□□□□□ -1.64
HOXA9-204ENST00000487384 PPDPFQ9H3Y8 114 aa4.83□□□□□ -1.64
HOXA9-204ENST00000487384 OSTCQ9NRP0 149 aa4.83□□□□□ -1.64
HOXA9-204ENST00000487384 IGLV4-3A0A075B6K6 122 aa4.82□□□□□ -1.64
HOXA9-204ENST00000487384 B5MCH6 92 aa4.82□□□□□ -1.64
HOXA9-204ENST00000487384 D6R8Y8 96 aa4.82□□□□□ -1.64
HOXA9-204ENST00000487384 IFI27P40305 119 aaPredicted RBP4.82□□□□□ -1.64
HOXA9-204ENST00000487384 RPL32P62910 135 aaKnown RBP4.82□□□□□ -1.64
HOXA9-204ENST00000487384 C6orf226Q5I0X4 101 aa4.82□□□□□ -1.64
HOXA9-204ENST00000487384 LINC00167Q96N53 147 aa4.82□□□□□ -1.64
HOXA9-204ENST00000487384 V9GYV3 84 aa4.82□□□□□ -1.64
HOXA9-204ENST00000487384 IGKV2D-26A0A0A0MRZ7 120 aa4.81□□□□□ -1.64
HOXA9-204ENST00000487384 LINC00862A6NCI5 91 aa4.81□□□□□ -1.64
HOXA9-204ENST00000487384 SNAPINO95295 136 aa4.81□□□□□ -1.64
HOXA9-204ENST00000487384 NPYP01303 97 aa4.81□□□□□ -1.64
HOXA9-204ENST00000487384 UBE2AP49459 152 aa4.81□□□□□ -1.64
HOXA9-204ENST00000487384 TMEM141Q96I45 108 aa4.81□□□□□ -1.64
HOXA9-204ENST00000487384 TP73-AS1Q9UF72 201 aa4.81□□□□□ -1.64
HOXA9-204ENST00000487384 NAT8BQ9UHF3 227 aa4.81□□□□□ -1.64
HOXA9-204ENST00000487384 FAM229BQ4G0N7 80 aa4.8□□□□□ -1.64
HOXA9-204ENST00000487384 Q6ZN92 141 aa4.8□□□□□ -1.64
HOXA9-204ENST00000487384 TEX43Q6ZNM6 134 aa4.8□□□□□ -1.64
HOXA9-204ENST00000487384 ALKBH7Q9BT30 221 aaPredicted RBP4.8□□□□□ -1.64
HOXA9-204ENST00000487384 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
HOXA9-204ENST00000487384 EIF5A2Q9GZV4 153 aaKnown RBP4.8□□□□□ -1.64
HOXA9-204ENST00000487384 RAB5AP20339 215 aa4.79□□□□□ -1.64
HOXA9-204ENST00000487384 FAM74A3Q4VXF1 159 aa4.79□□□□□ -1.64
HOXA9-204ENST00000487384 MRPL54Q6P161 138 aaKnown RBP4.79□□□□□ -1.64
HOXA9-204ENST00000487384 ALKAL2Q6UX46 152 aa4.79□□□□□ -1.64
HOXA9-204ENST00000487384 KRTAP13-1Q8IUC0 172 aa4.79□□□□□ -1.64
HOXA9-204ENST00000487384 Q8IZM0 81 aa4.79□□□□□ -1.64
HOXA9-204ENST00000487384 LINC01561Q8N1V8 128 aa4.79□□□□□ -1.64
HOXA9-204ENST00000487384 C2orf88Q9BSF0 95 aa4.79□□□□□ -1.64
HOXA9-204ENST00000487384 PYGO1Q9Y3Y4 419 aa4.79□□□□□ -1.64
HOXA9-204ENST00000487384 PCP4L1A6NKN8 68 aa4.78□□□□□ -1.64
HOXA9-204ENST00000487384 SCO1O75880 301 aa4.78□□□□□ -1.64
HOXA9-204ENST00000487384 BLOC1S1P78537 153 aa4.78□□□□□ -1.64
HOXA9-204ENST00000487384 PNRC1Q12796 327 aaPredicted RBP4.78□□□□□ -1.64
HOXA9-204ENST00000487384 C3orf22Q8N5N4 141 aa4.78□□□□□ -1.64
HOXA9-204ENST00000487384 LINC00337Q8N6G1 96 aa4.78□□□□□ -1.64
HOXA9-204ENST00000487384 IGKV2-28A0A075B6P5 120 aa4.77□□□□□ -1.65
HOXA9-204ENST00000487384 LOC389332A0A1B0GUA5 103 aa4.77□□□□□ -1.65
HOXA9-204ENST00000487384 F8VRH5 84 aa4.77□□□□□ -1.65
HOXA9-204ENST00000487384 IGKV2D-28P01615 120 aa4.77□□□□□ -1.65
HOXA9-204ENST00000487384 PRLHP81277 87 aa4.77□□□□□ -1.65
HOXA9-204ENST00000487384 ADIRFQ15847 76 aa4.77□□□□□ -1.65
HOXA9-204ENST00000487384 A0A1B0GW15 77 aa4.76□□□□□ -1.65
HOXA9-204ENST00000487384 SMIM27A0A1W2PRY6 76 aa4.76□□□□□ -1.65
HOXA9-204ENST00000487384 F8W036 122 aa4.76□□□□□ -1.65
HOXA9-204ENST00000487384 SRP19P09132 144 aaKnown RBP4.76□□□□□ -1.65
HOXA9-204ENST00000487384 G0S2P27469 103 aa4.76□□□□□ -1.65
HOXA9-204ENST00000487384 RAB5BP61020 215 aa4.76□□□□□ -1.65
HOXA9-204ENST00000487384 RPL23P62829 140 aaKnown RBP4.76□□□□□ -1.65
HOXA9-204ENST00000487384 ASB16-AS1Q495Z4 193 aa4.76□□□□□ -1.65
HOXA9-204ENST00000487384 NKAPP1Q8N9T2 125 aa4.76□□□□□ -1.65
HOXA9-204ENST00000487384 PRELID3AQ96N28 172 aa4.76□□□□□ -1.65
HOXA9-204ENST00000487384 CDKN2A-AS1Q9UH64 79 aa4.76□□□□□ -1.65
HOXA9-204ENST00000487384 PPBPP02775 128 aa4.75□□□□□ -1.65
HOXA9-204ENST00000487384 KRTAP19-4Q3LI73 84 aa4.75□□□□□ -1.65
HOXA9-204ENST00000487384 KRTAP13-3Q3SY46 172 aa4.75□□□□□ -1.65
HOXA9-204ENST00000487384 C2orf66Q6UXQ4 117 aa4.75□□□□□ -1.65
HOXA9-204ENST00000487384 TMEM136Q6ZRR5 245 aa4.75□□□□□ -1.65
HOXA9-204ENST00000487384 FAM19A1Q7Z5A9 133 aa4.75□□□□□ -1.65
HOXA9-204ENST00000487384 LINC00518Q8N0U6 118 aa4.75□□□□□ -1.65
HOXA9-204ENST00000487384 ORMDL3Q8N138 153 aa4.75□□□□□ -1.65
HOXA9-204ENST00000487384 AMELXQ99217 191 aa4.75□□□□□ -1.65
HOXA9-204ENST00000487384 TMEM238C9JI98 176 aa4.74□□□□□ -1.65
HOXA9-204ENST00000487384 S100A8P05109 93 aa4.74□□□□□ -1.65
HOXA9-204ENST00000487384 GEMIN7Q9H840 131 aaKnown RBP4.74□□□□□ -1.65
HOXA9-204ENST00000487384 CYSLTR1Q9Y271 337 aa4.74□□□□□ -1.65
HOXA9-204ENST00000487384 IGLV5-37A0A075B6J1 123 aa4.73□□□□□ -1.65
HOXA9-204ENST00000487384 A0A1B0GXF2 115 aa4.73□□□□□ -1.65
HOXA9-204ENST00000487384 CXCL5P42830 114 aa4.73□□□□□ -1.65
HOXA9-204ENST00000487384 SEC61BP60468 96 aaKnown RBP4.73□□□□□ -1.65
HOXA9-204ENST00000487384 HERVK_113P63121 156 aa4.73□□□□□ -1.65
HOXA9-204ENST00000487384 FP248Q71RG6 208 aaPredicted RBP4.73□□□□□ -1.65
HOXA9-204ENST00000487384 TCTE3Q8IZS6 198 aa4.73□□□□□ -1.65
HOXA9-204ENST00000487384 PLEKHB2Q96CS7 222 aa4.73□□□□□ -1.65
HOXA9-204ENST00000487384 IGIPA6NJ69 53 aa4.72□□□□□ -1.65
HOXA9-204ENST00000487384 SPAG11AQ6PDA7 123 aa4.72□□□□□ -1.65
HOXA9-204ENST00000487384 FAM19A3Q7Z5A8 133 aa4.72□□□□□ -1.65
HOXA9-204ENST00000487384 CBLN2Q8IUK8 224 aa4.72□□□□□ -1.65
HOXA9-204ENST00000487384 DAND5Q8N907 189 aa4.72□□□□□ -1.65
HOXA9-204ENST00000487384 COX7B2Q8TF08 81 aa4.72□□□□□ -1.65
HOXA9-204ENST00000487384 TMEM126AQ9H061 195 aa4.72□□□□□ -1.65
HOXA9-204ENST00000487384 MAP1LC3AQ9H492 121 aa4.72□□□□□ -1.65
HOXA9-204ENST00000487384 NAT8Q9UHE5 227 aa4.72□□□□□ -1.65
HOXA9-204ENST00000487384 SMIM1B2RUZ4 78 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms