RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 TMEM78Q5T7P6 136 aa1.89□□□□□ -2.11
PRPF38A-203ENST00000487160 LINC01600Q96MT4 127 aa1.89□□□□□ -2.11
PRPF38A-203ENST00000487160 PRO0255Q9UI72 69 aa1.89□□□□□ -2.11
PRPF38A-203ENST00000487160 FSIP2Q5CZC0 6907 aa1.89□□□□□ -2.11
PRPF38A-203ENST00000487160 TRAV12-3A0A0B4J271 114 aa1.88□□□□□ -2.11
PRPF38A-203ENST00000487160 PDCD5O14737 125 aa1.88□□□□□ -2.11
PRPF38A-203ENST00000487160 PMP2P02689 132 aa1.88□□□□□ -2.11
PRPF38A-203ENST00000487160 NBEAP1P0C6P0 100 aa1.88□□□□□ -2.11
PRPF38A-203ENST00000487160 AQP4P55087 323 aa1.88□□□□□ -2.11
PRPF38A-203ENST00000487160 RHEBQ15382 184 aa1.88□□□□□ -2.11
PRPF38A-203ENST00000487160 LINC01556Q5JQF7 62 aa1.88□□□□□ -2.11
PRPF38A-203ENST00000487160 Q6ZQT0 140 aa1.88□□□□□ -2.11
PRPF38A-203ENST00000487160 AKAP14Q86UN6 197 aa1.88□□□□□ -2.11
PRPF38A-203ENST00000487160 ZNF625Q96I27 306 aaPredicted RBP1.88□□□□□ -2.11
PRPF38A-203ENST00000487160 CARD19Q96LW7 228 aa1.88□□□□□ -2.11
PRPF38A-203ENST00000487160 SCGB3A1Q96QR1 104 aa1.88□□□□□ -2.11
PRPF38A-203ENST00000487160 IMUPQ9GZP8 106 aa1.88□□□□□ -2.11
PRPF38A-203ENST00000487160 TRAV1-2A0A0B4J238 106 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 A0A0D9SG52 128 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 CEBPZOSA8MTT3 80 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 SNRPGP15A8MWD9 76 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 C1orf196B1AJZ1 125 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 TAX1BP3O14907 124 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 SPINK4O60575 86 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 NDUFC2O95298 119 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 IFNA7P01567 189 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 SFTA3P0C7M3 94 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 CRYGAP11844 174 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 S100GP29377 79 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 ZNF846Q147U1 533 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 TDRG1Q3Y452 100 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 HIST3H2BBQ8N257 126 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 PLEKHB2Q96CS7 222 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 TP53RKQ96S44 253 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 MRPL32Q9BYC8 188 aaKnown RBP1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 OSTCQ9NRP0 149 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 SSR3Q9UNL2 185 aa1.87□□□□□ -2.11
PRPF38A-203ENST00000487160 A0A1B0GV72 72 aa1.86□□□□□ -2.11
PRPF38A-203ENST00000487160 LOC105371267A0A1B0GV96 52 aa1.86□□□□□ -2.11
PRPF38A-203ENST00000487160 A0A1W2PRE2 83 aa1.86□□□□□ -2.11
PRPF38A-203ENST00000487160 GABARAPH6UMI1 98 aa1.86□□□□□ -2.11
PRPF38A-203ENST00000487160 NMSQ5H8A3 153 aa1.86□□□□□ -2.11
PRPF38A-203ENST00000487160 LCN15Q6UWW0 184 aa1.86□□□□□ -2.11
PRPF38A-203ENST00000487160 SMIM15Q7Z3B0 74 aa1.86□□□□□ -2.11
PRPF38A-203ENST00000487160 C8orf59Q8N0T1 100 aaPredicted RBP1.86□□□□□ -2.11
PRPF38A-203ENST00000487160 OR5H6Q8NGV6 325 aa1.86□□□□□ -2.11
PRPF38A-203ENST00000487160 ATP6V0E2Q8NHE4 81 aa1.86□□□□□ -2.11
PRPF38A-203ENST00000487160 ZNF431Q8TF32 576 aaPredicted RBP1.86□□□□□ -2.11
PRPF38A-203ENST00000487160 TMEM126AQ9H061 195 aa1.86□□□□□ -2.11
PRPF38A-203ENST00000487160 C3orf85A0A1B0GTC6 90 aa1.85□□□□□ -2.11
PRPF38A-203ENST00000487160 DUXBA0A1W2PPF3 345 aa1.85□□□□□ -2.11
PRPF38A-203ENST00000487160 C7orf71A4D174 169 aa1.85□□□□□ -2.11
PRPF38A-203ENST00000487160 CRYM-AS1A6NIL9 109 aa1.85□□□□□ -2.11
PRPF38A-203ENST00000487160 HMSDA8MTL9 139 aa1.85□□□□□ -2.11
PRPF38A-203ENST00000487160 RPL7P18124 248 aaKnown RBP1.85□□□□□ -2.11
PRPF38A-203ENST00000487160 S100A4P26447 101 aaKnown RBP1.85□□□□□ -2.11
PRPF38A-203ENST00000487160 LYRM7Q5U5X0 104 aa1.85□□□□□ -2.11
PRPF38A-203ENST00000487160 NUP35Q8NFH5 326 aa1.85□□□□□ -2.11
PRPF38A-203ENST00000487160 OR5A1Q8NGJ0 315 aa1.85□□□□□ -2.11
PRPF38A-203ENST00000487160 TRGV9Q99603 122 aa1.85□□□□□ -2.11
PRPF38A-203ENST00000487160 TRDV1A0A1B0GX56 115 aa1.84□□□□□ -2.11
PRPF38A-203ENST00000487160 MAP1LC3B2A6NCE7 125 aa1.84□□□□□ -2.11
PRPF38A-203ENST00000487160 CFDP00746 253 aaPredicted RBP1.84□□□□□ -2.11
PRPF38A-203ENST00000487160 SLC25A5P05141 298 aaKnown RBP1.84□□□□□ -2.11
PRPF38A-203ENST00000487160 GPX1P07203 203 aa1.84□□□□□ -2.11
PRPF38A-203ENST00000487160 TRGC1P0CF51 173 aa1.84□□□□□ -2.11
PRPF38A-203ENST00000487160 ZNF345Q14585 488 aa1.84□□□□□ -2.11
PRPF38A-203ENST00000487160 ODF3Q96PU9 254 aa1.84□□□□□ -2.11
PRPF38A-203ENST00000487160 MAP1LC3BQ9GZQ8 125 aa1.84□□□□□ -2.11
PRPF38A-203ENST00000487160 SCN3BQ9NY72 215 aa1.84□□□□□ -2.11
PRPF38A-203ENST00000487160 HIGD1AQ9Y241 93 aa1.84□□□□□ -2.11
PRPF38A-203ENST00000487160 U3KQ87 197 aa1.84□□□□□ -2.11
PRPF38A-203ENST00000487160 PITX3O75364 302 aa1.83□□□□□ -2.12
PRPF38A-203ENST00000487160 SDC2P34741 201 aa1.83□□□□□ -2.12
PRPF38A-203ENST00000487160 CIRBPQ14011 172 aaKnown RBP1.83□□□□□ -2.12
PRPF38A-203ENST00000487160 ZC2HC1AQ96GY0 325 aa1.83□□□□□ -2.12
PRPF38A-203ENST00000487160 SLC50A1Q9BRV3 221 aa1.83□□□□□ -2.12
PRPF38A-203ENST00000487160 COPZ2Q9P299 210 aa1.83□□□□□ -2.12
PRPF38A-203ENST00000487160 PAIP2BQ9ULR5 123 aaKnown RBP1.83□□□□□ -2.12
PRPF38A-203ENST00000487160 EPDR1Q9UM22 224 aa1.83□□□□□ -2.12
PRPF38A-203ENST00000487160 HYPMO75409 117 aa1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 TCL1BO95988 128 aa1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 IL5P05113 134 aa1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 OR10J4P0C629 311 aa1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 IAPPP10997 89 aa1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 SCGB2B2Q4G0G5 96 aa1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 SPINK6Q6UWN8 80 aa1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 PATE2Q6UY27 113 aa1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 CYP2G1PQ6ZSU1 146 aa1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 COA5Q86WW8 74 aa1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 S100A16Q96FQ6 103 aaKnown RBP1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 DPH3Q96FX2 82 aa1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 HIST1H2BLQ99880 126 aa1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 C8orf4Q9NR00 106 aa1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 TPRKBQ9Y3C4 175 aa1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
PRPF38A-203ENST00000487160 H3BQ15 152 aa1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 TMEM256-PLSCR3K7ERE1 68 aa1.81□□□□□ -2.12
PRPF38A-203ENST00000487160 M0R3E3 92 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms