RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 NPBQ8NG41 125 aa3.47□□□□□ -1.85
COPS3-209ENST00000486810 CADP27708 2225 aa3.47□□□□□ -1.85
COPS3-209ENST00000486810 IGHV3-21A0A0B4J1V1 117 aa3.46□□□□□ -1.86
COPS3-209ENST00000486810 IGKV3-15P01624 115 aa3.46□□□□□ -1.86
COPS3-209ENST00000486810 IGKV3-11P04433 115 aa3.46□□□□□ -1.86
COPS3-209ENST00000486810 RPL39P62891 51 aaKnown RBP3.46□□□□□ -1.86
COPS3-209ENST00000486810 SPAG11BQ08648 103 aa3.46□□□□□ -1.86
COPS3-209ENST00000486810 SPAG11AQ6PDA7 123 aa3.46□□□□□ -1.86
COPS3-209ENST00000486810 TMEM167AQ8TBQ9 72 aa3.46□□□□□ -1.86
COPS3-209ENST00000486810 RPL39LQ96EH5 51 aaKnown RBP3.46□□□□□ -1.86
COPS3-209ENST00000486810 WFDC10AQ9H1F0 79 aa3.46□□□□□ -1.86
COPS3-209ENST00000486810 KCNQ1DNQ9H478 68 aa3.46□□□□□ -1.86
COPS3-209ENST00000486810 F5P12259 2224 aa3.46□□□□□ -1.86
COPS3-209ENST00000486810 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.45□□□□□ -1.86
COPS3-209ENST00000486810 IGHV3-64A0A075B6Q5 118 aa3.45□□□□□ -1.86
COPS3-209ENST00000486810 IGHV1-3A0A0C4DH29 117 aa3.45□□□□□ -1.86
COPS3-209ENST00000486810 NDUFA4O00483 81 aa3.45□□□□□ -1.86
COPS3-209ENST00000486810 LINC00315P59091 139 aa3.45□□□□□ -1.86
COPS3-209ENST00000486810 EGFEM1PQ0D2K5 195 aa3.45□□□□□ -1.86
COPS3-209ENST00000486810 HIGD2BQ4VC39 106 aa3.45□□□□□ -1.86
COPS3-209ENST00000486810 CSNK1G2-AS1Q8NCQ2 148 aa3.45□□□□□ -1.86
COPS3-209ENST00000486810 DEFB126Q9BYW3 111 aa3.45□□□□□ -1.86
COPS3-209ENST00000486810 TTTY12Q9BZ98 90 aa3.45□□□□□ -1.86
COPS3-209ENST00000486810 RP1P56715 2156 aa3.44□□□□□ -1.86
COPS3-209ENST00000486810 IGKV2-28A0A075B6P5 120 aa3.44□□□□□ -1.86
COPS3-209ENST00000486810 TRGV2A0A075B6R0 118 aa3.44□□□□□ -1.86
COPS3-209ENST00000486810 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.44□□□□□ -1.86
COPS3-209ENST00000486810 IGKV2D-28P01615 120 aa3.44□□□□□ -1.86
COPS3-209ENST00000486810 SPINK7P58062 85 aa3.44□□□□□ -1.86
COPS3-209ENST00000486810 SPATA8Q6RVD6 105 aa3.44□□□□□ -1.86
COPS3-209ENST00000486810 CAMK2N2Q96S95 79 aa3.44□□□□□ -1.86
COPS3-209ENST00000486810 IGLV4-60A0A075B6I1 120 aa3.43□□□□□ -1.86
COPS3-209ENST00000486810 IGHV3-15A0A0B4J1V0 119 aa3.43□□□□□ -1.86
COPS3-209ENST00000486810 KRTAP4-16G5E9R7 235 aaPredicted RBP3.43□□□□□ -1.86
COPS3-209ENST00000486810 H0YGG7 62 aa3.43□□□□□ -1.86
COPS3-209ENST00000486810 IGHV3-23P01764 117 aa3.43□□□□□ -1.86
COPS3-209ENST00000486810 KRTAP1-4P0C5Y4 121 aa3.43□□□□□ -1.86
COPS3-209ENST00000486810 P0C880 135 aa3.43□□□□□ -1.86
COPS3-209ENST00000486810 WT1-ASQ06250 92 aa3.43□□□□□ -1.86
COPS3-209ENST00000486810 CASC10Q5T4H9 136 aa3.43□□□□□ -1.86
COPS3-209ENST00000486810 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
COPS3-209ENST00000486810 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.43□□□□□ -1.86
COPS3-209ENST00000486810 TYMSOSQ8TAI1 123 aa3.43□□□□□ -1.86
COPS3-209ENST00000486810 RTTNQ86VV8 2226 aa3.42□□□□□ -1.86
COPS3-209ENST00000486810 COL27A1Q8IZC6 1860 aaPredicted RBP3.42□□□□□ -1.86
COPS3-209ENST00000486810 IGKV2-40A0A087WW87 121 aaPredicted RBP3.42□□□□□ -1.86
COPS3-209ENST00000486810 H0Y9P7 68 aa3.42□□□□□ -1.86
COPS3-209ENST00000486810 K7ERS5 55 aa3.42□□□□□ -1.86
COPS3-209ENST00000486810 IGKV2D-40P01614 121 aaPredicted RBP3.42□□□□□ -1.86
COPS3-209ENST00000486810 IGHV1-8P0DP01 117 aa3.42□□□□□ -1.86
COPS3-209ENST00000486810 COX7A1P24310 79 aa3.42□□□□□ -1.86
COPS3-209ENST00000486810 CMC4P56277 68 aaPredicted RBP3.42□□□□□ -1.86
COPS3-209ENST00000486810 LYZP61626 148 aa3.42□□□□□ -1.86
COPS3-209ENST00000486810 NNATQ16517 81 aa3.42□□□□□ -1.86
COPS3-209ENST00000486810 RPL39P5Q59GN2 51 aa3.42□□□□□ -1.86
COPS3-209ENST00000486810 LYPD2Q6UXB3 125 aa3.42□□□□□ -1.86
COPS3-209ENST00000486810 GAFA1Q96PS6 74 aa3.42□□□□□ -1.86
COPS3-209ENST00000486810 IGKV1-17P01599 117 aa3.41□□□□□ -1.86
COPS3-209ENST00000486810 C8orf17Q9NRJ1 99 aa3.41□□□□□ -1.86
COPS3-209ENST00000486810 IGLV10-54A0A075B6I4 117 aa3.4□□□□□ -1.87
COPS3-209ENST00000486810 TRBV6-4A0A1B0GX49 114 aa3.4□□□□□ -1.87
COPS3-209ENST00000486810 PRR4Q16378 134 aa3.4□□□□□ -1.87
COPS3-209ENST00000486810 C1orf137Q5JT78 98 aa3.4□□□□□ -1.87
COPS3-209ENST00000486810 COA5Q86WW8 74 aa3.4□□□□□ -1.87
COPS3-209ENST00000486810 DHRS4-AS1Q9P1J3 65 aa3.4□□□□□ -1.87
COPS3-209ENST00000486810 DPM3Q9P2X0 92 aa3.4□□□□□ -1.87
COPS3-209ENST00000486810 SEC16AO15027 2179 aa3.39□□□□□ -1.87
COPS3-209ENST00000486810 LINC00959A0A1B0GUT2 108 aa3.39□□□□□ -1.87
COPS3-209ENST00000486810 A8MWP4 228 aa3.39□□□□□ -1.87
COPS3-209ENST00000486810 DEFB108AA8MXU0 73 aa3.39□□□□□ -1.87
COPS3-209ENST00000486810 MGPP08493 103 aa3.39□□□□□ -1.87
COPS3-209ENST00000486810 COX7BP24311 80 aa3.39□□□□□ -1.87
COPS3-209ENST00000486810 KRTAP25-1Q3LHN0 102 aa3.39□□□□□ -1.87
COPS3-209ENST00000486810 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
COPS3-209ENST00000486810 LINC00483Q53H64 154 aa3.39□□□□□ -1.87
COPS3-209ENST00000486810 LINC01006Q8NI28 216 aa3.39□□□□□ -1.87
COPS3-209ENST00000486810 C20orf166-AS1Q96NR2 134 aa3.39□□□□□ -1.87
COPS3-209ENST00000486810 SPRR4Q96PI1 79 aa3.39□□□□□ -1.87
COPS3-209ENST00000486810 FAM215AQ9Y5M1 114 aa3.39□□□□□ -1.87
COPS3-209ENST00000486810 TRGV4A0A0C4DH28 118 aa3.38□□□□□ -1.87
COPS3-209ENST00000486810 IGHV3-66A0A0C4DH42 116 aa3.38□□□□□ -1.87
COPS3-209ENST00000486810 I3L2K1 104 aa3.38□□□□□ -1.87
COPS3-209ENST00000486810 IGLV2-23P01705 113 aa3.38□□□□□ -1.87
COPS3-209ENST00000486810 LINC00575Q6W349 94 aa3.38□□□□□ -1.87
COPS3-209ENST00000486810 C9orf163Q8N9P6 203 aa3.38□□□□□ -1.87
COPS3-209ENST00000486810 Q8TAT8 98 aa3.38□□□□□ -1.87
COPS3-209ENST00000486810 LEAP2Q969E1 77 aa3.38□□□□□ -1.87
COPS3-209ENST00000486810 CHCHD7Q9BUK0 85 aa3.38□□□□□ -1.87
COPS3-209ENST00000486810 IGHV3-64DA0A0J9YX35 117 aa3.37□□□□□ -1.87
COPS3-209ENST00000486810 M0QY20 66 aa3.37□□□□□ -1.87
COPS3-209ENST00000486810 M0R2N4 97 aa3.37□□□□□ -1.87
COPS3-209ENST00000486810 DNAH10OSP0CZ25 163 aa3.37□□□□□ -1.87
COPS3-209ENST00000486810 LINC00158P58513 81 aa3.37□□□□□ -1.87
COPS3-209ENST00000486810 CDKN2A-AS1Q9UH64 79 aa3.37□□□□□ -1.87
COPS3-209ENST00000486810 A0A096LNT2 108 aa3.36□□□□□ -1.87
COPS3-209ENST00000486810 IGKV3D-11A0A0A0MRZ8 115 aa3.36□□□□□ -1.87
COPS3-209ENST00000486810 CCL18P55774 89 aa3.36□□□□□ -1.87
COPS3-209ENST00000486810 DEFB112Q30KQ8 113 aa3.36□□□□□ -1.87
COPS3-209ENST00000486810 KRTAP26-1Q6PEX3 210 aa3.36□□□□□ -1.87
COPS3-209ENST00000486810 PTPRQQ9UMZ3 2332 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms