RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 PEX7O00628 323 aa4.65□□□□□ -1.67
HDAC3-209ENST00000486618 RNASE2P10153 161 aaKnown RBP4.65□□□□□ -1.67
HDAC3-209ENST00000486618 FXYD7P58549 80 aa4.65□□□□□ -1.67
HDAC3-209ENST00000486618 LYZP61626 148 aa4.65□□□□□ -1.67
HDAC3-209ENST00000486618 KLF9Q13886 244 aaPredicted RBP4.65□□□□□ -1.67
HDAC3-209ENST00000486618 WFDC2Q14508 124 aa4.65□□□□□ -1.67
HDAC3-209ENST00000486618 PYDC2Q56P42 97 aa4.65□□□□□ -1.67
HDAC3-209ENST00000486618 NMSQ5H8A3 153 aa4.65□□□□□ -1.67
HDAC3-209ENST00000486618 ZC2HC1BQ5TFG8 222 aa4.65□□□□□ -1.67
HDAC3-209ENST00000486618 MIC13Q5XKP0 118 aa4.65□□□□□ -1.67
HDAC3-209ENST00000486618 SLC25A29Q8N8R3 303 aa4.65□□□□□ -1.67
HDAC3-209ENST00000486618 NRACQ8N912 160 aa4.65□□□□□ -1.67
HDAC3-209ENST00000486618 DIRC1Q969H9 104 aa4.65□□□□□ -1.67
HDAC3-209ENST00000486618 RMI2Q96E14 147 aa4.65□□□□□ -1.67
HDAC3-209ENST00000486618 ZNF324O75467 553 aaPredicted RBP4.64□□□□□ -1.67
HDAC3-209ENST00000486618 IGKV1-17P01599 117 aa4.64□□□□□ -1.67
HDAC3-209ENST00000486618 C2orf83Q53S99 150 aa4.64□□□□□ -1.67
HDAC3-209ENST00000486618 SUMO4Q6EEV6 95 aa4.64□□□□□ -1.67
HDAC3-209ENST00000486618 C5orf38Q86SI9 138 aa4.64□□□□□ -1.67
HDAC3-209ENST00000486618 LYPD1Q8N2G4 141 aa4.64□□□□□ -1.67
HDAC3-209ENST00000486618 APOBP04114 4563 aaKnown RBP4.64□□□□□ -1.67
HDAC3-209ENST00000486618 TIMM17BO60830 172 aa4.63□□□□□ -1.67
HDAC3-209ENST00000486618 IGKV1-39P01597 117 aa4.63□□□□□ -1.67
HDAC3-209ENST00000486618 IGLV2-8P01709 118 aa4.63□□□□□ -1.67
HDAC3-209ENST00000486618 IGKV1D-39P04432 117 aa4.63□□□□□ -1.67
HDAC3-209ENST00000486618 DEFB130BP0DP73 79 aa4.63□□□□□ -1.67
HDAC3-209ENST00000486618 DEFB130AP0DP74 79 aa4.63□□□□□ -1.67
HDAC3-209ENST00000486618 RNASE4P34096 147 aaKnown RBP4.63□□□□□ -1.67
HDAC3-209ENST00000486618 ADAMTSL4-AS1Q5T5F5 129 aa4.63□□□□□ -1.67
HDAC3-209ENST00000486618 GDF5OSQ5U4N7 250 aa4.63□□□□□ -1.67
HDAC3-209ENST00000486618 Q5VSD8 79 aa4.63□□□□□ -1.67
HDAC3-209ENST00000486618 TMEM136Q6ZRR5 245 aa4.63□□□□□ -1.67
HDAC3-209ENST00000486618 FP248Q71RG6 208 aaPredicted RBP4.63□□□□□ -1.67
HDAC3-209ENST00000486618 SH2D6Q7Z4S9 175 aa4.63□□□□□ -1.67
HDAC3-209ENST00000486618 MRPL36Q9P0J6 103 aaKnown RBP4.63□□□□□ -1.67
HDAC3-209ENST00000486618 PRO0461Q9UI25 63 aa4.63□□□□□ -1.67
HDAC3-209ENST00000486618 FXYD6-FXYD2A0A087WZ82 144 aa4.62□□□□□ -1.67
HDAC3-209ENST00000486618 hADV29S1A0JD25 119 aa4.62□□□□□ -1.67
HDAC3-209ENST00000486618 INSP01308 110 aa4.62□□□□□ -1.67
HDAC3-209ENST00000486618 HTN1P15515 57 aa4.62□□□□□ -1.67
HDAC3-209ENST00000486618 KRTDAPP60985 99 aa4.62□□□□□ -1.67
HDAC3-209ENST00000486618 SUPT4H1P63272 117 aaKnown RBP4.62□□□□□ -1.67
HDAC3-209ENST00000486618 SSBP1Q04837 148 aaKnown RBP4.62□□□□□ -1.67
HDAC3-209ENST00000486618 Q9H3A6 140 aa4.62□□□□□ -1.67
HDAC3-209ENST00000486618 SDF2L1Q9HCN8 221 aa4.62□□□□□ -1.67
HDAC3-209ENST00000486618 OSTCQ9NRP0 149 aa4.62□□□□□ -1.67
HDAC3-209ENST00000486618 DNAH5Q8TE73 4624 aa4.61□□□□□ -1.67
HDAC3-209ENST00000486618 TRAV1-1A0A0B4J248 108 aa4.61□□□□□ -1.67
HDAC3-209ENST00000486618 NUPR1O60356 82 aa4.61□□□□□ -1.67
HDAC3-209ENST00000486618 CHTF8P0CG12 524 aa4.61□□□□□ -1.67
HDAC3-209ENST00000486618 FUSP35637 526 aaKnown RBP eCLIP4.61□□□□□ -1.67
HDAC3-209ENST00000486618 DEFB1P60022 68 aa4.61□□□□□ -1.67
HDAC3-209ENST00000486618 HIST1H4AP62805 103 aaKnown RBP4.61□□□□□ -1.67
HDAC3-209ENST00000486618 CIRBPQ14011 172 aaKnown RBP4.61□□□□□ -1.67
HDAC3-209ENST00000486618 CEND1Q8N111 149 aa4.61□□□□□ -1.67
HDAC3-209ENST00000486618 GTSF1Q8WW33 167 aa4.61□□□□□ -1.67
HDAC3-209ENST00000486618 TVP23CQ96ET8 276 aa4.61□□□□□ -1.67
HDAC3-209ENST00000486618 CYTL1Q9NRR1 136 aa4.61□□□□□ -1.67
HDAC3-209ENST00000486618 LY96Q9Y6Y9 160 aa4.61□□□□□ -1.67
HDAC3-209ENST00000486618 A0A0J9YX75 114 aa4.6□□□□□ -1.67
HDAC3-209ENST00000486618 SMIM13P0DJ93 91 aa4.6□□□□□ -1.67
HDAC3-209ENST00000486618 SERP2Q8N6R1 65 aa4.6□□□□□ -1.67
HDAC3-209ENST00000486618 DAND5Q8N907 189 aa4.6□□□□□ -1.67
HDAC3-209ENST00000486618 Q8N976 141 aa4.6□□□□□ -1.67
HDAC3-209ENST00000486618 TRGV9Q99603 122 aa4.6□□□□□ -1.67
HDAC3-209ENST00000486618 UPK3BQ9BT76 320 aa4.6□□□□□ -1.67
HDAC3-209ENST00000486618 CRYM-AS1A6NIL9 109 aa4.59□□□□□ -1.67
HDAC3-209ENST00000486618 SOCS3O14543 225 aa4.59□□□□□ -1.67
HDAC3-209ENST00000486618 P0C879 139 aa4.59□□□□□ -1.67
HDAC3-209ENST00000486618 SS18Q15532 418 aa4.59□□□□□ -1.67
HDAC3-209ENST00000486618 TMEM256Q8N2U0 113 aa4.59□□□□□ -1.67
HDAC3-209ENST00000486618 KRTAP1-5Q9BYS1 174 aa4.59□□□□□ -1.67
HDAC3-209ENST00000486618 TIMM8BQ9Y5J9 83 aaPredicted RBP4.59□□□□□ -1.67
HDAC3-209ENST00000486618 A8MTW9 85 aa4.58□□□□□ -1.68
HDAC3-209ENST00000486618 IAPPP10997 89 aa4.58□□□□□ -1.68
HDAC3-209ENST00000486618 LINC00315P59091 139 aa4.58□□□□□ -1.68
HDAC3-209ENST00000486618 CFAP126Q5VTH2 177 aa4.58□□□□□ -1.68
HDAC3-209ENST00000486618 MIR17HGQ75NE6 70 aa4.58□□□□□ -1.68
HDAC3-209ENST00000486618 Q8N8P6 123 aa4.58□□□□□ -1.68
HDAC3-209ENST00000486618 FAM104AQ969W3 186 aa4.58□□□□□ -1.68
HDAC3-209ENST00000486618 C16orf74Q96GX8 76 aa4.58□□□□□ -1.68
HDAC3-209ENST00000486618 H3BNG1 76 aa4.57□□□□□ -1.68
HDAC3-209ENST00000486618 SMR3BP02814 79 aaPredicted RBP4.57□□□□□ -1.68
HDAC3-209ENST00000486618 ESRGQ1W209 222 aa4.57□□□□□ -1.68
HDAC3-209ENST00000486618 SPINK13Q1W4C9 94 aa4.57□□□□□ -1.68
HDAC3-209ENST00000486618 SPANXN5Q5MJ07 72 aa4.57□□□□□ -1.68
HDAC3-209ENST00000486618 ATP11AUNQ6ZP68 121 aa4.57□□□□□ -1.68
HDAC3-209ENST00000486618 NFE4Q86UQ8 179 aa4.57□□□□□ -1.68
HDAC3-209ENST00000486618 TOMM5Q8N4H5 51 aa4.57□□□□□ -1.68
HDAC3-209ENST00000486618 SMIM4Q8WVI0 70 aa4.57□□□□□ -1.68
HDAC3-209ENST00000486618 XAGE1AQ9HD64 81 aa4.57□□□□□ -1.68
HDAC3-209ENST00000486618 A0A0J9YY99 117 aa4.56□□□□□ -1.68
HDAC3-209ENST00000486618 KRTAP16-1A8MUX0 517 aa4.56□□□□□ -1.68
HDAC3-209ENST00000486618 ACYP1P07311 99 aa4.56□□□□□ -1.68
HDAC3-209ENST00000486618 CKS2P33552 79 aa4.56□□□□□ -1.68
HDAC3-209ENST00000486618 KRTAP10-1P60331 282 aa4.56□□□□□ -1.68
HDAC3-209ENST00000486618 CYCSP99999 105 aaKnown RBP4.56□□□□□ -1.68
HDAC3-209ENST00000486618 PRR4Q16378 134 aa4.56□□□□□ -1.68
HDAC3-209ENST00000486618 Q6ZQT7 251 aa4.56□□□□□ -1.68
HDAC3-209ENST00000486618 Q6ZRN7 208 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms