RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 HYDINQ4G0P3 5121 aa6.37□□□□□ -1.39
COL12A1-208ENST00000486533 EPPK1P58107 5090 aaKnown RBP6.37□□□□□ -1.39
COL12A1-208ENST00000486533 TRGV1A0A0A0MS02 117 aa6.37□□□□□ -1.39
COL12A1-208ENST00000486533 TRAV8-3A0A0A6YYJ7 113 aa6.37□□□□□ -1.39
COL12A1-208ENST00000486533 FAM240AA0A1B0GVK7 77 aa6.37□□□□□ -1.39
COL12A1-208ENST00000486533 NUPR2A6NF83 97 aa6.37□□□□□ -1.39
COL12A1-208ENST00000486533 C16orf74Q96GX8 76 aa6.37□□□□□ -1.39
COL12A1-208ENST00000486533 PLECQ15149 4684 aaKnown RBP6.37□□□□□ -1.39
COL12A1-208ENST00000486533 IGLV5-39A0A0G2JS06 123 aa6.36□□□□□ -1.39
COL12A1-208ENST00000486533 LST1O00453 97 aa6.36□□□□□ -1.39
COL12A1-208ENST00000486533 ACYP1P07311 99 aa6.36□□□□□ -1.39
COL12A1-208ENST00000486533 Q6Q795 121 aa6.36□□□□□ -1.39
COL12A1-208ENST00000486533 TMEM243Q9BU79 118 aa6.36□□□□□ -1.39
COL12A1-208ENST00000486533 LY6G6CO95867 125 aa6.35□□□□□ -1.39
COL12A1-208ENST00000486533 NTN5Q8WTR8 489 aaPredicted RBP6.35□□□□□ -1.39
COL12A1-208ENST00000486533 KRTAP4-7Q9BYR0 210 aa6.35□□□□□ -1.39
COL12A1-208ENST00000486533 DNAH1Q9P2D7 4330 aa6.35□□□□□ -1.39
COL12A1-208ENST00000486533 NACAE9PAV3 2078 aa6.35□□□□□ -1.39
COL12A1-208ENST00000486533 XGP55808 180 aa6.35□□□□□ -1.39
COL12A1-208ENST00000486533 MEIG1Q5JSS6 88 aa6.35□□□□□ -1.39
COL12A1-208ENST00000486533 FAM222AQ5U5X8 452 aa6.35□□□□□ -1.39
COL12A1-208ENST00000486533 CEMP1Q6PRD7 247 aaPredicted RBP6.35□□□□□ -1.39
COL12A1-208ENST00000486533 LINC00476Q8WZB0 136 aa6.35□□□□□ -1.39
COL12A1-208ENST00000486533 FAM104AQ969W3 186 aa6.35□□□□□ -1.39
COL12A1-208ENST00000486533 XCL2Q9UBD3 114 aa6.35□□□□□ -1.39
COL12A1-208ENST00000486533 CDKN2A-AS1Q9UH64 79 aa6.35□□□□□ -1.39
COL12A1-208ENST00000486533 KLK5Q9Y337 293 aaPredicted RBP6.35□□□□□ -1.39
COL12A1-208ENST00000486533 IGHV3-38A0A0C4DH36 116 aa6.34□□□□□ -1.39
COL12A1-208ENST00000486533 MT-ATP8P03928 68 aa6.34□□□□□ -1.39
COL12A1-208ENST00000486533 GAGE2BQ13066 116 aa6.34□□□□□ -1.39
COL12A1-208ENST00000486533 GAGE2EQ4V326 116 aa6.34□□□□□ -1.39
COL12A1-208ENST00000486533 RNASE13Q5GAN3 156 aaKnown RBP6.34□□□□□ -1.39
COL12A1-208ENST00000486533 Q6ZSN1 163 aa6.34□□□□□ -1.39
COL12A1-208ENST00000486533 LINC00308Q8TCZ7 52 aa6.34□□□□□ -1.39
COL12A1-208ENST00000486533 Q9H8V8 135 aa6.34□□□□□ -1.39
COL12A1-208ENST00000486533 GAGE2DQ9UEU5 116 aa6.34□□□□□ -1.39
COL12A1-208ENST00000486533 TRAV13-2A0A0B4J235 113 aa6.33□□□□□ -1.4
COL12A1-208ENST00000486533 TRBV6-4A0A1B0GX49 114 aa6.33□□□□□ -1.4
COL12A1-208ENST00000486533 COX7A2LO14548 114 aa6.33□□□□□ -1.4
COL12A1-208ENST00000486533 DEFB4AO15263 64 aa6.33□□□□□ -1.4
COL12A1-208ENST00000486533 TRACP01848 142 aa6.33□□□□□ -1.4
COL12A1-208ENST00000486533 C11orf45Q8TAV5 145 aa6.33□□□□□ -1.4
COL12A1-208ENST00000486533 ANAPC13Q9BS18 74 aa6.33□□□□□ -1.4
COL12A1-208ENST00000486533 IGHV3OR16-12A0A075B7B8 117 aa6.32□□□□□ -1.4
COL12A1-208ENST00000486533 SMIM1B2RUZ4 78 aa6.32□□□□□ -1.4
COL12A1-208ENST00000486533 NANOS2P60321 138 aaKnown RBP6.32□□□□□ -1.4
COL12A1-208ENST00000486533 TTC32Q5I0X7 151 aa6.32□□□□□ -1.4
COL12A1-208ENST00000486533 ADAMTSL4-AS1Q5T5F5 129 aa6.32□□□□□ -1.4
COL12A1-208ENST00000486533 LINC00242Q5T6M2 205 aa6.32□□□□□ -1.4
COL12A1-208ENST00000486533 C1orf158Q8N1D5 194 aa6.32□□□□□ -1.4
COL12A1-208ENST00000486533 C11orf68Q9H3H3 251 aaKnown RBP6.32□□□□□ -1.4
COL12A1-208ENST00000486533 TRGV2A0A075B6R0 118 aa6.31□□□□□ -1.4
COL12A1-208ENST00000486533 CDC42SE2Q9NRR3 84 aa6.31□□□□□ -1.4
COL12A1-208ENST00000486533 CRPP02741 224 aa6.31□□□□□ -1.4
COL12A1-208ENST00000486533 INAFM2P0DMQ5 153 aa6.31□□□□□ -1.4
COL12A1-208ENST00000486533 ALMS1Q8TCU4 4167 aa6.3□□□□□ -1.4
COL12A1-208ENST00000486533 BIRC6Q9NR09 4857 aa6.3□□□□□ -1.4
COL12A1-208ENST00000486533 TRAV26-1A0A087WT03 109 aa6.3□□□□□ -1.4
COL12A1-208ENST00000486533 TRAV13-1A0A0B4J241 112 aa6.3□□□□□ -1.4
COL12A1-208ENST00000486533 TRGV4A0A0C4DH28 118 aa6.3□□□□□ -1.4
COL12A1-208ENST00000486533 GAGE12JA6NER3 117 aa6.3□□□□□ -1.4
COL12A1-208ENST00000486533 GIG44P09565 113 aaPredicted RBP6.3□□□□□ -1.4
COL12A1-208ENST00000486533 GAGE4Q13068 117 aa6.3□□□□□ -1.4
COL12A1-208ENST00000486533 GAGE5Q13069 117 aa6.3□□□□□ -1.4
COL12A1-208ENST00000486533 Q8NAQ8 132 aa6.3□□□□□ -1.4
COL12A1-208ENST00000486533 ZNF625Q96I27 306 aaPredicted RBP6.3□□□□□ -1.4
COL12A1-208ENST00000486533 IGHV4-28A0A0C4DH34 117 aa6.29□□□□□ -1.4
COL12A1-208ENST00000486533 MIFP14174 115 aa6.29□□□□□ -1.4
COL12A1-208ENST00000486533 NPC2P61916 151 aa6.29□□□□□ -1.4
COL12A1-208ENST00000486533 Q6ZTI0 123 aa6.29□□□□□ -1.4
COL12A1-208ENST00000486533 COX7B2Q8TF08 81 aa6.29□□□□□ -1.4
COL12A1-208ENST00000486533 TEX49A0A1B0GTD5 131 aa6.28□□□□□ -1.4
COL12A1-208ENST00000486533 C15orf53Q8NAA6 179 aa6.28□□□□□ -1.4
COL12A1-208ENST00000486533 CLEC2BQ92478 149 aa6.28□□□□□ -1.4
COL12A1-208ENST00000486533 IMUPQ9GZP8 106 aa6.28□□□□□ -1.4
COL12A1-208ENST00000486533 NOP10Q9NPE3 64 aaKnown RBP6.28□□□□□ -1.4
COL12A1-208ENST00000486533 F5H768 121 aa6.27□□□□□ -1.41
COL12A1-208ENST00000486533 H0YGX0 51 aa6.27□□□□□ -1.41
COL12A1-208ENST00000486533 COX6A2Q02221 97 aa6.27□□□□□ -1.41
COL12A1-208ENST00000486533 LINC01561Q8N1V8 128 aa6.27□□□□□ -1.41
COL12A1-208ENST00000486533 X6R8D5 127 aa6.27□□□□□ -1.41
COL12A1-208ENST00000486533 KMT2AQ03164 3969 aa6.27□□□□□ -1.41
COL12A1-208ENST00000486533 IBA57-AS1B1ANH7 110 aa6.27□□□□□ -1.41
COL12A1-208ENST00000486533 DNAL4O96015 105 aa6.27□□□□□ -1.41
COL12A1-208ENST00000486533 CSNK1G2-AS1Q8NCQ2 148 aa6.27□□□□□ -1.41
COL12A1-208ENST00000486533 FRAS1Q86XX4 4008 aa6.26□□□□□ -1.41
COL12A1-208ENST00000486533 GAGE7O76087 117 aa6.26□□□□□ -1.41
COL12A1-208ENST00000486533 PRM2P04554 102 aa6.26□□□□□ -1.41
COL12A1-208ENST00000486533 GAGE12FP0CL80 117 aa6.26□□□□□ -1.41
COL12A1-208ENST00000486533 GAGE12GP0CL81 117 aa6.26□□□□□ -1.41
COL12A1-208ENST00000486533 GAGE12IP0CL82 117 aa6.26□□□□□ -1.41
COL12A1-208ENST00000486533 LINC00694P0DN24 101 aa6.26□□□□□ -1.41
COL12A1-208ENST00000486533 RPL28P46779 137 aaKnown RBP6.26□□□□□ -1.41
COL12A1-208ENST00000486533 NDUFV3P56181 108 aaKnown RBP6.26□□□□□ -1.41
COL12A1-208ENST00000486533 GAGE6Q13070 117 aa6.26□□□□□ -1.41
COL12A1-208ENST00000486533 NTM-AS1Q6ZSK4 140 aa6.26□□□□□ -1.41
COL12A1-208ENST00000486533 Q6ZTC4 211 aa6.26□□□□□ -1.41
COL12A1-208ENST00000486533 DAND5Q8N907 189 aa6.26□□□□□ -1.41
COL12A1-208ENST00000486533 CHCHD5Q9BSY4 110 aa6.26□□□□□ -1.41
COL12A1-208ENST00000486533 Q9UF83 564 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms