RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, human

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUDP-204	ENST00000486446	TRBV6-4	A0A1B0GX49	114 aa		5.01	□□□□□ -1.61
PUDP-204	ENST00000486446		J3QR89	54 aa		5.01	□□□□□ -1.61
PUDP-204	ENST00000486446	HTN3	P15516	51 aa		5.01	□□□□□ -1.61
PUDP-204	ENST00000486446	LGALS3	P17931	250 aa	Known RBP	5.01	□□□□□ -1.61
PUDP-204	ENST00000486446	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.01	□□□□□ -1.61
PUDP-204	ENST00000486446	TMEM170B	Q5T4T1	132 aa		5.01	□□□□□ -1.61
PUDP-204	ENST00000486446	FAM222A	Q5U5X8	452 aa		5.01	□□□□□ -1.61
PUDP-204	ENST00000486446	C10orf126	Q8N4M7	172 aa		5.01	□□□□□ -1.61
PUDP-204	ENST00000486446	CHCHD7	Q9BUK0	85 aa		5.01	□□□□□ -1.61
PUDP-204	ENST00000486446	PPDPF	Q9H3Y8	114 aa		5.01	□□□□□ -1.61
PUDP-204	ENST00000486446	PLAC8L1	A1L4L8	177 aa		5	□□□□□ -1.61
PUDP-204	ENST00000486446		F5H768	121 aa		5	□□□□□ -1.61
PUDP-204	ENST00000486446		H3BMG7	143 aa		5	□□□□□ -1.61
PUDP-204	ENST00000486446	TIMM17B	O60830	172 aa		5	□□□□□ -1.61
PUDP-204	ENST00000486446	CFC1B	P0CG36	223 aa		5	□□□□□ -1.61
PUDP-204	ENST00000486446	CFC1	P0CG37	223 aa		5	□□□□□ -1.61
PUDP-204	ENST00000486446	DAD1	P61803	113 aa		5	□□□□□ -1.61
PUDP-204	ENST00000486446	LINC00612	Q8N6U2	182 aa		5	□□□□□ -1.61
PUDP-204	ENST00000486446	SPANXD	Q9BXN6	97 aa		5	□□□□□ -1.61
PUDP-204	ENST00000486446	SPANXC	Q9NY87	97 aa		5	□□□□□ -1.61
PUDP-204	ENST00000486446	UBE2D4	Q9Y2X8	147 aa		5	□□□□□ -1.61
PUDP-204	ENST00000486446	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.99	□□□□□ -1.61
PUDP-204	ENST00000486446	IGHV1-58	A0A0C4DH39	117 aa		4.99	□□□□□ -1.61
PUDP-204	ENST00000486446		A0A0J9YXV3	536 aa		4.99	□□□□□ -1.61
PUDP-204	ENST00000486446		A0A0J9YXY3	114 aa		4.99	□□□□□ -1.61
PUDP-204	ENST00000486446	PRM2	P04554	102 aa		4.99	□□□□□ -1.61
PUDP-204	ENST00000486446	RPL24	P83731	157 aa	Known RBP	4.99	□□□□□ -1.61
PUDP-204	ENST00000486446	RPL36A	P83881	106 aa	Known RBP	4.99	□□□□□ -1.61
PUDP-204	ENST00000486446	WFDC2	Q14508	124 aa		4.99	□□□□□ -1.61
PUDP-204	ENST00000486446	KRTAP5-3	Q6L8H2	238 aa		4.99	□□□□□ -1.61
PUDP-204	ENST00000486446	RPL36AL	Q969Q0	106 aa	Known RBP	4.99	□□□□□ -1.61
PUDP-204	ENST00000486446	LITAF	Q99732	161 aa		4.99	□□□□□ -1.61
PUDP-204	ENST00000486446	MRPL16	Q9NX20	251 aa	Known RBP	4.99	□□□□□ -1.61
PUDP-204	ENST00000486446	PRO1854	Q9UHT4	67 aa		4.99	□□□□□ -1.61
PUDP-204	ENST00000486446	TRGV1	A0A0A0MS02	117 aa		4.98	□□□□□ -1.61
PUDP-204	ENST00000486446	IGHV3-33	P01772	117 aa		4.98	□□□□□ -1.61
PUDP-204	ENST00000486446	IGHV3-30-3	P0DP02	117 aa		4.98	□□□□□ -1.61
PUDP-204	ENST00000486446	DEFB130B	P0DP73	79 aa		4.98	□□□□□ -1.61
PUDP-204	ENST00000486446	DEFB130A	P0DP74	79 aa		4.98	□□□□□ -1.61
PUDP-204	ENST00000486446		Q6ZTI0	123 aa		4.98	□□□□□ -1.61
PUDP-204	ENST00000486446	UBE2DNL	Q8IWF7	75 aa		4.98	□□□□□ -1.61
PUDP-204	ENST00000486446	VSIG2	Q96IQ7	327 aa		4.98	□□□□□ -1.61
PUDP-204	ENST00000486446	OPRPN	Q99935	248 aa	Predicted RBP	4.98	□□□□□ -1.61
PUDP-204	ENST00000486446	ALMS1	Q8TCU4	4167 aa		4.97	□□□□□ -1.61
PUDP-204	ENST00000486446	UBR4	Q5T4S7	5183 aa		4.97	□□□□□ -1.61
PUDP-204	ENST00000486446	IGLV5-39	A0A0G2JS06	123 aa		4.97	□□□□□ -1.61
PUDP-204	ENST00000486446	LYRM9	A8MSI8	78 aa		4.97	□□□□□ -1.61
PUDP-204	ENST00000486446		K7EQD1	137 aa		4.97	□□□□□ -1.61
PUDP-204	ENST00000486446	IFITM1	P13164	125 aa		4.97	□□□□□ -1.61
PUDP-204	ENST00000486446	LINC00336	Q6ZUF6	198 aa		4.97	□□□□□ -1.61
PUDP-204	ENST00000486446	NOP10	Q9NPE3	64 aa	Known RBP	4.97	□□□□□ -1.61
PUDP-204	ENST00000486446		Q9UF83	564 aa		4.97	□□□□□ -1.61
PUDP-204	ENST00000486446	PLEC	Q15149	4684 aa	Known RBP	4.97	□□□□□ -1.61
PUDP-204	ENST00000486446	IGHV3-73	A0A0B4J1V6	119 aa		4.96	□□□□□ -1.62
PUDP-204	ENST00000486446	TRBV30	A0A0K0K1B3	111 aa		4.96	□□□□□ -1.62
PUDP-204	ENST00000486446	CKS1B	P61024	79 aa		4.96	□□□□□ -1.62
PUDP-204	ENST00000486446	ETDB	Q3ZM63	59 aa		4.96	□□□□□ -1.62
PUDP-204	ENST00000486446	HECTD4	Q9Y4D8	3996 aa		4.96	□□□□□ -1.62
PUDP-204	ENST00000486446	TRGV2	A0A075B6R0	118 aa		4.95	□□□□□ -1.62
PUDP-204	ENST00000486446	NDUFA1	O15239	70 aa		4.95	□□□□□ -1.62
PUDP-204	ENST00000486446	APOM	O95445	188 aa		4.95	□□□□□ -1.62
PUDP-204	ENST00000486446	TCL1B	O95988	128 aa		4.95	□□□□□ -1.62
PUDP-204	ENST00000486446	ATP5G1	P05496	136 aa		4.95	□□□□□ -1.62
PUDP-204	ENST00000486446	LINC00694	P0DN24	101 aa		4.95	□□□□□ -1.62
PUDP-204	ENST00000486446	HERVK_113	P63121	156 aa		4.95	□□□□□ -1.62
PUDP-204	ENST00000486446	MIA	Q16674	131 aa		4.95	□□□□□ -1.62
PUDP-204	ENST00000486446	TEN1	Q86WV5	123 aa		4.95	□□□□□ -1.62
PUDP-204	ENST00000486446	MUSTN1	Q8IVN3	82 aa		4.95	□□□□□ -1.62
PUDP-204	ENST00000486446	CDC42SE2	Q9NRR3	84 aa		4.95	□□□□□ -1.62
PUDP-204	ENST00000486446	HERC1	Q15751	4861 aa		4.94	□□□□□ -1.62
PUDP-204	ENST00000486446		M0R2N4	97 aa		4.94	□□□□□ -1.62
PUDP-204	ENST00000486446	NTM-AS1	Q6ZSK4	140 aa		4.94	□□□□□ -1.62
PUDP-204	ENST00000486446		Q6ZUT4	128 aa		4.94	□□□□□ -1.62
PUDP-204	ENST00000486446	SH2D6	Q7Z4S9	175 aa		4.94	□□□□□ -1.62
PUDP-204	ENST00000486446	C15orf53	Q8NAA6	179 aa		4.94	□□□□□ -1.62
PUDP-204	ENST00000486446	PPDPFL	Q8WWR9	84 aa		4.94	□□□□□ -1.62
PUDP-204	ENST00000486446	NDUFA12	Q9UI09	145 aa		4.94	□□□□□ -1.62
PUDP-204	ENST00000486446	ERG28	Q9UKR5	140 aa		4.94	□□□□□ -1.62
PUDP-204	ENST00000486446	LOC107984156	A0A0G2JMH3	177 aa		4.93	□□□□□ -1.62
PUDP-204	ENST00000486446		A0A1B0GUV1	79 aa		4.93	□□□□□ -1.62
PUDP-204	ENST00000486446	GAGE7	O76087	117 aa		4.93	□□□□□ -1.62
PUDP-204	ENST00000486446	GAGE12F	P0CL80	117 aa		4.93	□□□□□ -1.62
PUDP-204	ENST00000486446	GAGE12G	P0CL81	117 aa		4.93	□□□□□ -1.62
PUDP-204	ENST00000486446	GAGE12I	P0CL82	117 aa		4.93	□□□□□ -1.62
PUDP-204	ENST00000486446	RPL13A	P40429	203 aa	Known RBP	4.93	□□□□□ -1.62
PUDP-204	ENST00000486446	GAGE5	Q13069	117 aa		4.93	□□□□□ -1.62
PUDP-204	ENST00000486446	GAGE6	Q13070	117 aa		4.93	□□□□□ -1.62
PUDP-204	ENST00000486446	LINC00242	Q5T6M2	205 aa		4.93	□□□□□ -1.62
PUDP-204	ENST00000486446	ARL17A	Q8IVW1	177 aa		4.93	□□□□□ -1.62
PUDP-204	ENST00000486446	SMIM20	Q8N5G0	67 aa		4.93	□□□□□ -1.62
PUDP-204	ENST00000486446	DEFB104A	Q8WTQ1	72 aa		4.93	□□□□□ -1.62
PUDP-204	ENST00000486446	SIGMAR1	Q99720	223 aa		4.93	□□□□□ -1.62
PUDP-204	ENST00000486446	TMEM243	Q9BU79	118 aa		4.93	□□□□□ -1.62
PUDP-204	ENST00000486446	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.92	□□□□□ -1.62
PUDP-204	ENST00000486446	TRBV6-8	A0A0A6YYG3	113 aa		4.92	□□□□□ -1.62
PUDP-204	ENST00000486446	TRAV8-3	A0A0A6YYJ7	113 aa		4.92	□□□□□ -1.62
PUDP-204	ENST00000486446	TRGV4	A0A0C4DH28	118 aa		4.92	□□□□□ -1.62
PUDP-204	ENST00000486446	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.92	□□□□□ -1.62
PUDP-204	ENST00000486446	PSMB2	P49721	201 aa		4.92	□□□□□ -1.62
PUDP-204	ENST00000486446	ADAMTSL4-AS1	Q5T5F5	129 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms