RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 IGLV10-54A0A075B6I4 117 aa9.87□□□□□ -0.83
POLR2J3-204ENST00000486319 A0A1B0GWB2 263 aa9.87□□□□□ -0.83
POLR2J3-204ENST00000486319 RPL24P83731 157 aaKnown RBP9.87□□□□□ -0.83
POLR2J3-204ENST00000486319 MIAQ16674 131 aa9.87□□□□□ -0.83
POLR2J3-204ENST00000486319 LINC01556Q5JQF7 62 aa9.87□□□□□ -0.83
POLR2J3-204ENST00000486319 ENHOQ6UWT2 76 aa9.87□□□□□ -0.83
POLR2J3-204ENST00000486319 C9orf118A6NHY6 69 aa9.86□□□□□ -0.83
POLR2J3-204ENST00000486319 MUSTN1Q8IVN3 82 aa9.86□□□□□ -0.83
POLR2J3-204ENST00000486319 Q8IZM0 81 aa9.86□□□□□ -0.83
POLR2J3-204ENST00000486319 RAB37Q96AX2 223 aa9.86□□□□□ -0.83
POLR2J3-204ENST00000486319 KMT2AQ03164 3969 aa9.85□□□□□ -0.83
POLR2J3-204ENST00000486319 PRSS2P07478 247 aa9.85□□□□□ -0.83
POLR2J3-204ENST00000486319 IFITM1P13164 125 aa9.85□□□□□ -0.83
POLR2J3-204ENST00000486319 MALP21145 153 aa9.85□□□□□ -0.83
POLR2J3-204ENST00000486319 CCL18P55774 89 aa9.85□□□□□ -0.83
POLR2J3-204ENST00000486319 FOXI1Q12951 378 aa9.85□□□□□ -0.83
POLR2J3-204ENST00000486319 MEIG1Q5JSS6 88 aa9.85□□□□□ -0.83
POLR2J3-204ENST00000486319 K7ERJ3 54 aa9.84□□□□□ -0.83
POLR2J3-204ENST00000486319 C6orf226Q5I0X4 101 aa9.84□□□□□ -0.83
POLR2J3-204ENST00000486319 ADAMTSL4-AS1Q5T5F5 129 aa9.84□□□□□ -0.83
POLR2J3-204ENST00000486319 COPS9Q8WXC6 57 aa9.84□□□□□ -0.83
POLR2J3-204ENST00000486319 UBE2WQ96B02 151 aa9.84□□□□□ -0.83
POLR2J3-204ENST00000486319 GAGE12HA6NDE8 117 aa9.83□□□□□ -0.84
POLR2J3-204ENST00000486319 APOMO95445 188 aa9.83□□□□□ -0.84
POLR2J3-204ENST00000486319 DNAH10OSP0CZ25 163 aa9.83□□□□□ -0.84
POLR2J3-204ENST00000486319 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.82□□□□□ -0.84
POLR2J3-204ENST00000486319 A4D1N5 150 aa9.82□□□□□ -0.84
POLR2J3-204ENST00000486319 H3BUT2 72 aa9.82□□□□□ -0.84
POLR2J3-204ENST00000486319 CXCL5P42830 114 aa9.82□□□□□ -0.84
POLR2J3-204ENST00000486319 VAMP3Q15836 100 aa9.82□□□□□ -0.84
POLR2J3-204ENST00000486319 LINC00588Q9Y4M8 146 aa9.82□□□□□ -0.84
POLR2J3-204ENST00000486319 CFC1BP0CG36 223 aa9.81□□□□□ -0.84
POLR2J3-204ENST00000486319 CFC1P0CG37 223 aa9.81□□□□□ -0.84
POLR2J3-204ENST00000486319 CFAP161Q6P656 301 aa9.81□□□□□ -0.84
POLR2J3-204ENST00000486319 IBA57-AS1B1ANH7 110 aa9.8□□□□□ -0.84
POLR2J3-204ENST00000486319 CKS1BP61024 79 aa9.8□□□□□ -0.84
POLR2J3-204ENST00000486319 UBE2DNLQ8IWF7 75 aa9.8□□□□□ -0.84
POLR2J3-204ENST00000486319 PPDPFQ9H3Y8 114 aa9.8□□□□□ -0.84
POLR2J3-204ENST00000486319 A0A0B4J2C4 111 aa9.79□□□□□ -0.84
POLR2J3-204ENST00000486319 UPK3BQ9BT76 320 aa9.79□□□□□ -0.84
POLR2J3-204ENST00000486319 VPS13DQ5THJ4 4388 aa9.79□□□□□ -0.84
POLR2J3-204ENST00000486319 A0A0U1RRA0 63 aa9.78□□□□□ -0.84
POLR2J3-204ENST00000486319 A0A1W2PPM0 123 aa9.78□□□□□ -0.84
POLR2J3-204ENST00000486319 KIAA0087Q14695 138 aa9.78□□□□□ -0.84
POLR2J3-204ENST00000486319 DAND5Q8N907 189 aa9.78□□□□□ -0.84
POLR2J3-204ENST00000486319 LINC00308Q8TCZ7 52 aa9.78□□□□□ -0.84
POLR2J3-204ENST00000486319 NPC2P61916 151 aa9.77□□□□□ -0.84
POLR2J3-204ENST00000486319 C1orf43Q9BWL3 253 aa9.77□□□□□ -0.84
POLR2J3-204ENST00000486319 PRO1854Q9UHT4 67 aa9.77□□□□□ -0.84
POLR2J3-204ENST00000486319 FABP2P12104 132 aa9.77□□□□□ -0.85
POLR2J3-204ENST00000486319 LINC00158P58513 81 aa9.77□□□□□ -0.85
POLR2J3-204ENST00000486319 UBE2V1Q13404 147 aa9.77□□□□□ -0.85
POLR2J3-204ENST00000486319 NAA38Q9BRA0 125 aaKnown RBP9.77□□□□□ -0.85
POLR2J3-204ENST00000486319 PGPEP1Q9NXJ5 209 aa9.77□□□□□ -0.85
POLR2J3-204ENST00000486319 ERG28Q9UKR5 140 aa9.77□□□□□ -0.85
POLR2J3-204ENST00000486319 SPAG11BQ08648 103 aa9.76□□□□□ -0.85
POLR2J3-204ENST00000486319 KRTAP26-1Q6PEX3 210 aa9.76□□□□□ -0.85
POLR2J3-204ENST00000486319 C2orf82Q6UX34 121 aa9.75□□□□□ -0.85
POLR2J3-204ENST00000486319 MIR7-3HGQ8N6C7 128 aa9.75□□□□□ -0.85
POLR2J3-204ENST00000486319 COX17Q14061 63 aa9.74□□□□□ -0.85
POLR2J3-204ENST00000486319 GTF2H5Q6ZYL4 71 aa9.74□□□□□ -0.85
POLR2J3-204ENST00000486319 IGKV2D-24A0A075B6R9 120 aa9.73□□□□□ -0.85
POLR2J3-204ENST00000486319 GAGE10A6NGK3 116 aa9.73□□□□□ -0.85
POLR2J3-204ENST00000486319 M0R2N4 97 aa9.73□□□□□ -0.85
POLR2J3-204ENST00000486319 TSPAN13O95857 204 aa9.73□□□□□ -0.85
POLR2J3-204ENST00000486319 PFN2P35080 140 aa9.73□□□□□ -0.85
POLR2J3-204ENST00000486319 K7EP34 96 aa9.72□□□□□ -0.85
POLR2J3-204ENST00000486319 EIF4EBP3O60516 100 aaPredicted RBP9.72□□□□□ -0.85
POLR2J3-204ENST00000486319 SOSTDC1Q6X4U4 206 aa9.72□□□□□ -0.85
POLR2J3-204ENST00000486319 SPCS1Q9Y6A9 102 aa9.72□□□□□ -0.85
POLR2J3-204ENST00000486319 RMI2Q96E14 147 aa9.72□□□□□ -0.85
POLR2J3-204ENST00000486319 EPPK1P58107 5090 aaKnown RBP9.71□□□□□ -0.86
POLR2J3-204ENST00000486319 LYRM7Q5U5X0 104 aa9.71□□□□□ -0.86
POLR2J3-204ENST00000486319 ZNF561-AS1K7EIQ3 104 aa9.7□□□□□ -0.86
POLR2J3-204ENST00000486319 NTN5Q8WTR8 489 aaPredicted RBP9.7□□□□□ -0.86
POLR2J3-204ENST00000486319 Q9HAA7 133 aa9.7□□□□□ -0.86
POLR2J3-204ENST00000486319 C6orf223Q8N319 242 aa9.69□□□□□ -0.86
POLR2J3-204ENST00000486319 GVQW2A0A096LPI5 108 aaPredicted RBP9.68□□□□□ -0.86
POLR2J3-204ENST00000486319 Q1RN00 199 aa9.68□□□□□ -0.86
POLR2J3-204ENST00000486319 UNQ6190/PRO20217Q6UXQ8 127 aa9.68□□□□□ -0.86
POLR2J3-204ENST00000486319 SND1-IT1Q9HBX3 110 aa9.68□□□□□ -0.86
POLR2J3-204ENST00000486319 DNAH6Q9C0G6 4158 aa9.68□□□□□ -0.86
POLR2J3-204ENST00000486319 LOC107984156A0A0G2JMH3 177 aa9.67□□□□□ -0.86
POLR2J3-204ENST00000486319 F8WDY8 70 aa9.67□□□□□ -0.86
POLR2J3-204ENST00000486319 ARL17AQ8IVW1 177 aa9.67□□□□□ -0.86
POLR2J3-204ENST00000486319 C15orf56Q8N910 161 aa9.67□□□□□ -0.86
POLR2J3-204ENST00000486319 C2orf48Q96LS8 159 aa9.67□□□□□ -0.86
POLR2J3-204ENST00000486319 FRAS1Q86XX4 4008 aa9.67□□□□□ -0.86
POLR2J3-204ENST00000486319 H7C2G1 150 aa9.66□□□□□ -0.86
POLR2J3-204ENST00000486319 PSMB2P49721 201 aa9.66□□□□□ -0.86
POLR2J3-204ENST00000486319 Q6ZR54 194 aa9.66□□□□□ -0.86
POLR2J3-204ENST00000486319 LINC00526Q96FQ7 95 aa9.66□□□□□ -0.86
POLR2J3-204ENST00000486319 TRBV30A0A0K0K1B3 111 aa9.66□□□□□ -0.86
POLR2J3-204ENST00000486319 RPL13AP40429 203 aaKnown RBP9.66□□□□□ -0.86
POLR2J3-204ENST00000486319 HIGD2BQ4VC39 106 aa9.66□□□□□ -0.86
POLR2J3-204ENST00000486319 C10orf25Q5T742 122 aa9.66□□□□□ -0.86
POLR2J3-204ENST00000486319 CAMK2N2Q96S95 79 aa9.66□□□□□ -0.86
POLR2J3-204ENST00000486319 TRAV13-2A0A0B4J235 113 aa9.65□□□□□ -0.86
POLR2J3-204ENST00000486319 NBDYA0A0U1RRE5 68 aa9.64□□□□□ -0.87
POLR2J3-204ENST00000486319 SCGB1C2P0DMR2 95 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms