RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 TTC32Q5I0X7 151 aa9.54□□□□□ -0.88
COL9A1-207ENST00000486080 HIST1H4GQ99525 98 aa9.54□□□□□ -0.88
COL9A1-207ENST00000486080 A0A0U1RRA0 63 aa9.54□□□□□ -0.88
COL9A1-207ENST00000486080 EREGO14944 169 aa9.54□□□□□ -0.88
COL9A1-207ENST00000486080 HERV-K104P63124 156 aa9.54□□□□□ -0.88
COL9A1-207ENST00000486080 LY6G6CO95867 125 aa9.53□□□□□ -0.88
COL9A1-207ENST00000486080 SRSF9Q13242 221 aaKnown RBP eCLIP9.53□□□□□ -0.88
COL9A1-207ENST00000486080 BVES-AS1Q5T3Y7 98 aa9.53□□□□□ -0.88
COL9A1-207ENST00000486080 SACSQ9NZJ4 4579 aa9.53□□□□□ -0.88
COL9A1-207ENST00000486080 M0R143 59 aa9.52□□□□□ -0.89
COL9A1-207ENST00000486080 MEIG1Q5JSS6 88 aa9.52□□□□□ -0.89
COL9A1-207ENST00000486080 C10orf25Q5T742 122 aa9.52□□□□□ -0.89
COL9A1-207ENST00000486080 UNQ6190/PRO20217Q6UXQ8 127 aa9.52□□□□□ -0.89
COL9A1-207ENST00000486080 DAND5Q8N907 189 aa9.52□□□□□ -0.89
COL9A1-207ENST00000486080 SPANXB1Q9NS25 103 aaPredicted RBP9.52□□□□□ -0.89
COL9A1-207ENST00000486080 TMEM238C9JI98 176 aa9.52□□□□□ -0.89
COL9A1-207ENST00000486080 LECT2O14960 151 aa9.52□□□□□ -0.89
COL9A1-207ENST00000486080 SMIM13P0DJ93 91 aa9.52□□□□□ -0.89
COL9A1-207ENST00000486080 GCSHP23434 173 aa9.52□□□□□ -0.89
COL9A1-207ENST00000486080 NTN5Q8WTR8 489 aaPredicted RBP9.52□□□□□ -0.89
COL9A1-207ENST00000486080 TM2D2Q9BX73 214 aa9.52□□□□□ -0.89
COL9A1-207ENST00000486080 COX11Q9Y6N1 276 aa9.52□□□□□ -0.89
COL9A1-207ENST00000486080 KMT2AQ03164 3969 aa9.51□□□□□ -0.89
COL9A1-207ENST00000486080 USP17L23D6RBM5 183 aa9.51□□□□□ -0.89
COL9A1-207ENST00000486080 ZNF561-AS1K7EIQ3 104 aa9.51□□□□□ -0.89
COL9A1-207ENST00000486080 CEND1Q8N111 149 aa9.51□□□□□ -0.89
COL9A1-207ENST00000486080 LINC00476Q8WZB0 136 aa9.51□□□□□ -0.89
COL9A1-207ENST00000486080 GVQW2A0A096LPI5 108 aaPredicted RBP9.5□□□□□ -0.89
COL9A1-207ENST00000486080 TIMM17BO60830 172 aa9.5□□□□□ -0.89
COL9A1-207ENST00000486080 CXCL5P42830 114 aa9.5□□□□□ -0.89
COL9A1-207ENST00000486080 FXYD2P54710 66 aa9.5□□□□□ -0.89
COL9A1-207ENST00000486080 TAL2Q16559 108 aa9.5□□□□□ -0.89
COL9A1-207ENST00000486080 C9orf116Q5BN46 136 aaPredicted RBP9.5□□□□□ -0.89
COL9A1-207ENST00000486080 PFN2P35080 140 aa9.49□□□□□ -0.89
COL9A1-207ENST00000486080 CIRBPQ14011 172 aaKnown RBP9.49□□□□□ -0.89
COL9A1-207ENST00000486080 SFTA2Q6UW10 78 aa9.49□□□□□ -0.89
COL9A1-207ENST00000486080 ALMS1Q8TCU4 4167 aa9.49□□□□□ -0.89
COL9A1-207ENST00000486080 PSCAO43653 123 aa9.49□□□□□ -0.89
COL9A1-207ENST00000486080 NPC2P61916 151 aa9.49□□□□□ -0.89
COL9A1-207ENST00000486080 WFDC2Q14508 124 aa9.49□□□□□ -0.89
COL9A1-207ENST00000486080 Q6ZR54 194 aa9.49□□□□□ -0.89
COL9A1-207ENST00000486080 ERG28Q9UKR5 140 aa9.49□□□□□ -0.89
COL9A1-207ENST00000486080 EIF4EBP3O60516 100 aaPredicted RBP9.48□□□□□ -0.89
COL9A1-207ENST00000486080 MUSTN1Q8IVN3 82 aa9.48□□□□□ -0.89
COL9A1-207ENST00000486080 SPANXDQ9BXN6 97 aa9.48□□□□□ -0.89
COL9A1-207ENST00000486080 SPANXCQ9NY87 97 aa9.48□□□□□ -0.89
COL9A1-207ENST00000486080 HYDINQ4G0P3 5121 aa9.48□□□□□ -0.89
COL9A1-207ENST00000486080 LINC00158P58513 81 aa9.47□□□□□ -0.89
COL9A1-207ENST00000486080 Q6ZRN7 208 aaPredicted RBP9.47□□□□□ -0.89
COL9A1-207ENST00000486080 CAMK2N2Q96S95 79 aa9.47□□□□□ -0.89
COL9A1-207ENST00000486080 C2orf48Q96LS8 159 aa9.47□□□□□ -0.89
COL9A1-207ENST00000486080 C6orf48Q9UBA6 75 aa9.47□□□□□ -0.89
COL9A1-207ENST00000486080 Q6ZRU5 148 aa9.46□□□□□ -0.9
COL9A1-207ENST00000486080 MIR7-3HGQ8N6C7 128 aa9.46□□□□□ -0.9
COL9A1-207ENST00000486080 SLPIP03973 132 aa9.45□□□□□ -0.9
COL9A1-207ENST00000486080 PTTG1IPP53801 180 aa9.45□□□□□ -0.9
COL9A1-207ENST00000486080 SOSTDC1Q6X4U4 206 aa9.45□□□□□ -0.9
COL9A1-207ENST00000486080 LINC00308Q8TCZ7 52 aa9.45□□□□□ -0.9
COL9A1-207ENST00000486080 Q6ZVH6 145 aa9.44□□□□□ -0.9
COL9A1-207ENST00000486080 DNAH2Q9P225 4427 aa9.44□□□□□ -0.9
COL9A1-207ENST00000486080 SYCNQ0VAF6 134 aa9.43□□□□□ -0.9
COL9A1-207ENST00000486080 DNAH6Q9C0G6 4158 aa9.43□□□□□ -0.9
COL9A1-207ENST00000486080 RYR3Q15413 4870 aa9.42□□□□□ -0.9
COL9A1-207ENST00000486080 TRBV30A0A0K0K1B3 111 aa9.42□□□□□ -0.9
COL9A1-207ENST00000486080 A4D1N5 150 aa9.42□□□□□ -0.9
COL9A1-207ENST00000486080 NHP2Q9NX24 153 aaKnown RBP9.42□□□□□ -0.9
COL9A1-207ENST00000486080 RYR2Q92736 4967 aa9.42□□□□□ -0.9
COL9A1-207ENST00000486080 LRCOL1A6NCL2 159 aa9.42□□□□□ -0.9
COL9A1-207ENST00000486080 K7ERJ3 54 aa9.42□□□□□ -0.9
COL9A1-207ENST00000486080 IFITM1P13164 125 aa9.42□□□□□ -0.9
COL9A1-207ENST00000486080 COX17Q14061 63 aa9.42□□□□□ -0.9
COL9A1-207ENST00000486080 F8WDY8 70 aa9.41□□□□□ -0.9
COL9A1-207ENST00000486080 RPL24P83731 157 aaKnown RBP9.41□□□□□ -0.9
COL9A1-207ENST00000486080 A6NDN8 102 aa9.4□□□□□ -0.9
COL9A1-207ENST00000486080 COL5A1-AS1Q5SY13 56 aa9.4□□□□□ -0.9
COL9A1-207ENST00000486080 CARD19Q96LW7 228 aa9.4□□□□□ -0.9
COL9A1-207ENST00000486080 C1orf134Q5TEV5 83 aa9.39□□□□□ -0.91
COL9A1-207ENST00000486080 SND1-IT1Q9HBX3 110 aa9.39□□□□□ -0.91
COL9A1-207ENST00000486080 TMEM238LA0A1B0GVL6 79 aa9.38□□□□□ -0.91
COL9A1-207ENST00000486080 A6NJY4 79 aa9.38□□□□□ -0.91
COL9A1-207ENST00000486080 CFC1BP0CG36 223 aa9.38□□□□□ -0.91
COL9A1-207ENST00000486080 CFC1P0CG37 223 aa9.38□□□□□ -0.91
COL9A1-207ENST00000486080 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.38□□□□□ -0.91
COL9A1-207ENST00000486080 A0A1B0GWB2 263 aa9.38□□□□□ -0.91
COL9A1-207ENST00000486080 LBHQ53QV2 105 aaPredicted RBP9.37□□□□□ -0.91
COL9A1-207ENST00000486080 COPS9Q8WXC6 57 aa9.37□□□□□ -0.91
COL9A1-207ENST00000486080 RAB37Q96AX2 223 aa9.37□□□□□ -0.91
COL9A1-207ENST00000486080 TAX1BP3O14907 124 aa9.36□□□□□ -0.91
COL9A1-207ENST00000486080 C14orf177Q52M58 125 aa9.36□□□□□ -0.91
COL9A1-207ENST00000486080 NDUFC2-KCTD14E9PQ53 114 aa9.35□□□□□ -0.91
COL9A1-207ENST00000486080 RNF151Q2KHN1 245 aa9.35□□□□□ -0.91
COL9A1-207ENST00000486080 Q6ZRP5 223 aa9.35□□□□□ -0.91
COL9A1-207ENST00000486080 XAGE1AQ9HD64 81 aa9.35□□□□□ -0.91
COL9A1-207ENST00000486080 A0A087WTM6 91 aa9.35□□□□□ -0.91
COL9A1-207ENST00000486080 LOC107984156A0A0G2JMH3 177 aa9.35□□□□□ -0.91
COL9A1-207ENST00000486080 ARL17AQ8IVW1 177 aa9.35□□□□□ -0.91
COL9A1-207ENST00000486080 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.34□□□□□ -0.91
COL9A1-207ENST00000486080 CNBPP62633 177 aaKnown RBP9.34□□□□□ -0.91
COL9A1-207ENST00000486080 GAGE2EQ4V326 116 aa9.34□□□□□ -0.91
COL9A1-207ENST00000486080 Q8NDZ9 215 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms