RNA–Protein interactions for RNA: ENST00000486042.1

PHC3-211, Transcript of polyhomeotic homolog 3, humanhuman

TSL 3

Gene PHC3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-211ENST00000486042 CCL18P55774 89 aa1.74□□□□□ -2.13
PHC3-211ENST00000486042 ESPL1Q14674 2120 aa1.74□□□□□ -2.13
PHC3-211ENST00000486042 NMES1Q9C002 83 aa1.74□□□□□ -2.13
PHC3-211ENST00000486042 CCL26Q9Y258 94 aa1.74□□□□□ -2.13
PHC3-211ENST00000486042 LINC01558Q9Y6Z2 57 aa1.74□□□□□ -2.13
PHC3-211ENST00000486042 ARL2-SNX15V9GYD0 113 aa1.74□□□□□ -2.13
PHC3-211ENST00000486042 COL4A2P08572 1712 aa1.74□□□□□ -2.13
PHC3-211ENST00000486042 RP1P56715 2156 aa1.74□□□□□ -2.13
PHC3-211ENST00000486042 FCGBPQ9Y6R7 5405 aaPredicted RBP1.73□□□□□ -2.13
PHC3-211ENST00000486042 ABCA4P78363 2273 aa1.73□□□□□ -2.13
PHC3-211ENST00000486042 PCDH15Q96QU1 1955 aa1.73□□□□□ -2.13
PHC3-211ENST00000486042 TRBV6-5A0A0K0K1A5 114 aa1.73□□□□□ -2.13
PHC3-211ENST00000486042 TRBV30A0A0K0K1B3 111 aa1.73□□□□□ -2.13
PHC3-211ENST00000486042 CTSGP08311 255 aa1.73□□□□□ -2.13
PHC3-211ENST00000486042 SSBP1Q04837 148 aaKnown RBP1.73□□□□□ -2.13
PHC3-211ENST00000486042 BRD3OSQ6XYD6 125 aa1.73□□□□□ -2.13
PHC3-211ENST00000486042 SPRR4Q96PI1 79 aa1.73□□□□□ -2.13
PHC3-211ENST00000486042 TTTY12Q9BZ98 90 aa1.73□□□□□ -2.13
PHC3-211ENST00000486042 E9PCH4 1651 aa1.73□□□□□ -2.13
PHC3-211ENST00000486042 NCOA6Q14686 2063 aaPredicted RBP1.73□□□□□ -2.13
PHC3-211ENST00000486042 IGKV3D-7A0A0C4DH55 119 aa1.72□□□□□ -2.13
PHC3-211ENST00000486042 IGKV3OR2-268A0A0C4DH90 116 aa1.72□□□□□ -2.13
PHC3-211ENST00000486042 LEPROTL1O95214 131 aa1.72□□□□□ -2.13
PHC3-211ENST00000486042 IGLV3-1P01715 115 aa1.72□□□□□ -2.13
PHC3-211ENST00000486042 SMIM4Q8WVI0 70 aa1.72□□□□□ -2.13
PHC3-211ENST00000486042 SHANK1Q9Y566 2161 aa1.72□□□□□ -2.13
PHC3-211ENST00000486042 CEP192Q8TEP8 1941 aa1.72□□□□□ -2.13
PHC3-211ENST00000486042 PDE4DIPQ5VU43 2346 aa1.71□□□□□ -2.14
PHC3-211ENST00000486042 TRBV6-4A0A1B0GX49 114 aa1.71□□□□□ -2.14
PHC3-211ENST00000486042 D6R8Y8 96 aa1.71□□□□□ -2.14
PHC3-211ENST00000486042 PPYP01298 95 aa1.71□□□□□ -2.14
PHC3-211ENST00000486042 IFI6P09912 130 aa1.71□□□□□ -2.14
PHC3-211ENST00000486042 ZNF137PP52743 207 aa1.71□□□□□ -2.14
PHC3-211ENST00000486042 SPAG11BQ08648 103 aa1.71□□□□□ -2.14
PHC3-211ENST00000486042 TPRXLQ17RH7 258 aa1.71□□□□□ -2.14
PHC3-211ENST00000486042 GDF5OSQ5U4N7 250 aa1.71□□□□□ -2.14
PHC3-211ENST00000486042 SPAG11AQ6PDA7 123 aa1.71□□□□□ -2.14
PHC3-211ENST00000486042 MUSTN1Q8IVN3 82 aa1.71□□□□□ -2.14
PHC3-211ENST00000486042 TOMM5Q8N4H5 51 aa1.71□□□□□ -2.14
PHC3-211ENST00000486042 COX7B2Q8TF08 81 aa1.71□□□□□ -2.14
PHC3-211ENST00000486042 OBSCN-AS1Q96MR7 158 aa1.71□□□□□ -2.14
PHC3-211ENST00000486042 CMC2Q9NRP2 79 aa1.71□□□□□ -2.14
PHC3-211ENST00000486042 DNAJC13O75165 2243 aa1.71□□□□□ -2.14
PHC3-211ENST00000486042 CLTCL1P53675 1640 aa1.7□□□□□ -2.14
PHC3-211ENST00000486042 UNC13CQ8NB66 2214 aa1.7□□□□□ -2.14
PHC3-211ENST00000486042 A0A087WTM6 91 aa1.7□□□□□ -2.14
PHC3-211ENST00000486042 F8VRH5 84 aa1.7□□□□□ -2.14
PHC3-211ENST00000486042 M0R135 149 aa1.7□□□□□ -2.14
PHC3-211ENST00000486042 UQCR11O14957 56 aa1.7□□□□□ -2.14
PHC3-211ENST00000486042 NDUFB1O75438 58 aa1.7□□□□□ -2.14
PHC3-211ENST00000486042 PPP1R17O96001 155 aa1.7□□□□□ -2.14
PHC3-211ENST00000486042 PRB4P10163 310 aaPredicted RBP1.7□□□□□ -2.14
PHC3-211ENST00000486042 RNASE3P12724 160 aaKnown RBP1.7□□□□□ -2.14
PHC3-211ENST00000486042 SPATA8Q6RVD6 105 aa1.7□□□□□ -2.14
PHC3-211ENST00000486042 DEFB107AQ8IZN7 70 aa1.7□□□□□ -2.14
PHC3-211ENST00000486042 PPP1R1CQ8WVI7 109 aa1.7□□□□□ -2.14
PHC3-211ENST00000486042 ZCCHC13Q8WW36 166 aaKnown RBP1.7□□□□□ -2.14
PHC3-211ENST00000486042 R4GMQ9 66 aa1.7□□□□□ -2.14
PHC3-211ENST00000486042 TNRC6CQ9HCJ0 1690 aaKnown RBP1.7□□□□□ -2.14
PHC3-211ENST00000486042 COL5A1P20908 1838 aaPredicted RBP1.69□□□□□ -2.14
PHC3-211ENST00000486042 NBDYA0A0U1RRE5 68 aa1.69□□□□□ -2.14
PHC3-211ENST00000486042 TFF1P04155 84 aa1.69□□□□□ -2.14
PHC3-211ENST00000486042 NCBP2-AS2Q69YL0 99 aa1.69□□□□□ -2.14
PHC3-211ENST00000486042 SFTA2Q6UW10 78 aa1.69□□□□□ -2.14
PHC3-211ENST00000486042 SPACA4Q8TDM5 124 aa1.69□□□□□ -2.14
PHC3-211ENST00000486042 WFDC6Q9BQY6 131 aa1.69□□□□□ -2.14
PHC3-211ENST00000486042 TXNDC17Q9BRA2 123 aa1.69□□□□□ -2.14
PHC3-211ENST00000486042 FAM103A1Q9BTL3 118 aaKnown RBP1.69□□□□□ -2.14
PHC3-211ENST00000486042 PRR15LQ9BU68 103 aa1.69□□□□□ -2.14
PHC3-211ENST00000486042 TULP4Q9NRJ4 1543 aa1.69□□□□□ -2.14
PHC3-211ENST00000486042 IGKV2-40A0A087WW87 121 aaPredicted RBP1.68□□□□□ -2.14
PHC3-211ENST00000486042 LOC110117498A0A087WWA1 95 aa1.68□□□□□ -2.14
PHC3-211ENST00000486042 A0A1B0GUT8 65 aa1.68□□□□□ -2.14
PHC3-211ENST00000486042 LINC01549A6NIU2 74 aa1.68□□□□□ -2.14
PHC3-211ENST00000486042 JMJD7-PLA2G4BH0Y9G9 81 aa1.68□□□□□ -2.14
PHC3-211ENST00000486042 H3BVH4 76 aa1.68□□□□□ -2.14
PHC3-211ENST00000486042 M0R2N4 97 aa1.68□□□□□ -2.14
PHC3-211ENST00000486042 INE1O15225 51 aa1.68□□□□□ -2.14
PHC3-211ENST00000486042 IGKV2D-40P01614 121 aaPredicted RBP1.68□□□□□ -2.14
PHC3-211ENST00000486042 MGPP08493 103 aa1.68□□□□□ -2.14
PHC3-211ENST00000486042 LINC00322Q6ZN03 302 aaPredicted RBP1.68□□□□□ -2.14
PHC3-211ENST00000486042 GNG13Q9P2W3 67 aa1.68□□□□□ -2.14
PHC3-211ENST00000486042 DDX60Q8IY21 1712 aaKnown RBP1.68□□□□□ -2.14
PHC3-211ENST00000486042 DOCK10Q96BY6 2186 aa1.68□□□□□ -2.14
PHC3-211ENST00000486042 HCRTO43612 131 aa1.67□□□□□ -2.14
PHC3-211ENST00000486042 S100A3P33764 101 aa1.67□□□□□ -2.14
PHC3-211ENST00000486042 C10orf55Q5SWW7 151 aa1.67□□□□□ -2.14
PHC3-211ENST00000486042 DUOX1Q9NRD9 1551 aa1.67□□□□□ -2.14
PHC3-211ENST00000486042 OTOGLQ3ZCN5 2332 aa1.67□□□□□ -2.14
PHC3-211ENST00000486042 LRRC37A2A6NM11 1700 aa1.66□□□□□ -2.14
PHC3-211ENST00000486042 A0A0G2JQZ4 141 aa1.66□□□□□ -2.14
PHC3-211ENST00000486042 SPINT3P49223 89 aa1.66□□□□□ -2.14
PHC3-211ENST00000486042 LINC00472Q9H8W2 130 aa1.66□□□□□ -2.14
PHC3-211ENST00000486042 SNURFQ9Y675 71 aa1.66□□□□□ -2.14
PHC3-211ENST00000486042 RTTNQ86VV8 2226 aa1.66□□□□□ -2.14
PHC3-211ENST00000486042 C4BP0C0L5 1744 aa1.66□□□□□ -2.14
PHC3-211ENST00000486042 ANKRD17O75179 2603 aaKnown RBP1.65□□□□□ -2.15
PHC3-211ENST00000486042 A0A087WVE0 104 aa1.65□□□□□ -2.15
PHC3-211ENST00000486042 H0Y9P7 68 aa1.65□□□□□ -2.15
PHC3-211ENST00000486042 COX17Q14061 63 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms