RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 URB1-AS1Q96HZ7 61 aa11.46□□□□□ -0.57
COL1A1-206ENST00000485870 CKS1BP61024 79 aa11.45□□□□□ -0.58
COL1A1-206ENST00000485870 C6orf226Q5I0X4 101 aa11.45□□□□□ -0.58
COL1A1-206ENST00000485870 Q8IZM0 81 aa11.45□□□□□ -0.58
COL1A1-206ENST00000485870 CST9LQ9H4G1 147 aa11.45□□□□□ -0.58
COL1A1-206ENST00000485870 TINCRA0A1B0GVN0 87 aa11.44□□□□□ -0.58
COL1A1-206ENST00000485870 FAM168BA1KXE4 195 aa11.44□□□□□ -0.58
COL1A1-206ENST00000485870 LINC00614P0C842 121 aa11.44□□□□□ -0.58
COL1A1-206ENST00000485870 PMVKQ15126 192 aa11.44□□□□□ -0.58
COL1A1-206ENST00000485870 PHF5AQ7RTV0 110 aaKnown RBP11.44□□□□□ -0.58
COL1A1-206ENST00000485870 YPEL4Q96NS1 127 aa11.44□□□□□ -0.58
COL1A1-206ENST00000485870 A0A096LNJ9 63 aa11.43□□□□□ -0.58
COL1A1-206ENST00000485870 PMCHL1Q16048 86 aa11.43□□□□□ -0.58
COL1A1-206ENST00000485870 NDUFC2-KCTD14E9PQ53 114 aa11.42□□□□□ -0.58
COL1A1-206ENST00000485870 FAM19A5Q7Z5A7 132 aaPredicted RBP11.42□□□□□ -0.58
COL1A1-206ENST00000485870 CBLN2Q8IUK8 224 aa11.42□□□□□ -0.58
COL1A1-206ENST00000485870 SMIM1B2RUZ4 78 aa11.41□□□□□ -0.58
COL1A1-206ENST00000485870 HBDP02042 147 aa11.41□□□□□ -0.58
COL1A1-206ENST00000485870 NDUFA6P56556 154 aa11.41□□□□□ -0.58
COL1A1-206ENST00000485870 IGLV5-45A0A087WSX0 123 aa11.4□□□□□ -0.58
COL1A1-206ENST00000485870 RAB5BP61020 215 aa11.4□□□□□ -0.58
COL1A1-206ENST00000485870 SPINK8P0C7L1 97 aa11.39□□□□□ -0.59
COL1A1-206ENST00000485870 PDZD11Q5EBL8 140 aa11.39□□□□□ -0.59
COL1A1-206ENST00000485870 PSORS1C2Q9UIG4 136 aa11.39□□□□□ -0.59
COL1A1-206ENST00000485870 F8VRH5 84 aa11.38□□□□□ -0.59
COL1A1-206ENST00000485870 SLC7A5P1Q8MH63 180 aa11.38□□□□□ -0.59
COL1A1-206ENST00000485870 COX7B2Q8TF08 81 aa11.38□□□□□ -0.59
COL1A1-206ENST00000485870 CXCL5P42830 114 aa11.37□□□□□ -0.59
COL1A1-206ENST00000485870 C9orf129Q5T035 196 aaKnown RBP11.37□□□□□ -0.59
COL1A1-206ENST00000485870 SPINK6Q6UWN8 80 aa11.36□□□□□ -0.59
COL1A1-206ENST00000485870 KRTAP7-1Q8IUC3 87 aa11.36□□□□□ -0.59
COL1A1-206ENST00000485870 H3BRM9 83 aa11.35□□□□□ -0.59
COL1A1-206ENST00000485870 M0QXV9 152 aa11.35□□□□□ -0.59
COL1A1-206ENST00000485870 MT1HL1P0DM35 61 aa11.35□□□□□ -0.59
COL1A1-206ENST00000485870 IGLC3P0DOY3 106 aa11.35□□□□□ -0.59
COL1A1-206ENST00000485870 ATP5LO75964 103 aa11.34□□□□□ -0.59
COL1A1-206ENST00000485870 SRSF9Q13242 221 aaKnown RBP eCLIP11.34□□□□□ -0.59
COL1A1-206ENST00000485870 C1orf137Q5JT78 98 aa11.34□□□□□ -0.59
COL1A1-206ENST00000485870 KRTAP11-1Q8IUC1 163 aa11.33□□□□□ -0.6
COL1A1-206ENST00000485870 XAGE1AQ9HD64 81 aa11.33□□□□□ -0.6
COL1A1-206ENST00000485870 ZNF22P17026 224 aaPredicted RBP11.32□□□□□ -0.6
COL1A1-206ENST00000485870 UBE2BP63146 152 aa11.32□□□□□ -0.6
COL1A1-206ENST00000485870 BAGE3Q86Y29 109 aa11.32□□□□□ -0.6
COL1A1-206ENST00000485870 CHCHD1Q96BP2 118 aaKnown RBP11.32□□□□□ -0.6
COL1A1-206ENST00000485870 SERTAD4-AS1Q5TG53 156 aa11.31□□□□□ -0.6
COL1A1-206ENST00000485870 REG3GQ6UW15 175 aa11.3□□□□□ -0.6
COL1A1-206ENST00000485870 C11orf86A6NJI1 115 aa11.29□□□□□ -0.6
COL1A1-206ENST00000485870 TRGC2P03986 189 aa11.29□□□□□ -0.6
COL1A1-206ENST00000485870 LINC01600Q96MT4 127 aa11.29□□□□□ -0.6
COL1A1-206ENST00000485870 HMCN2Q8NDA2 5059 aa11.29□□□□□ -0.6
COL1A1-206ENST00000485870 TNXBP22105 4242 aa11.29□□□□□ -0.6
COL1A1-206ENST00000485870 IGLV5-39A0A0G2JS06 123 aa11.28□□□□□ -0.6
COL1A1-206ENST00000485870 IGLV7-43P04211 117 aa11.27□□□□□ -0.61
COL1A1-206ENST00000485870 TMEM170BQ5T4T1 132 aa11.27□□□□□ -0.61
COL1A1-206ENST00000485870 IFI27L1Q96BM0 104 aa11.27□□□□□ -0.61
COL1A1-206ENST00000485870 CHTOPQ9Y3Y2 248 aaKnown RBP11.27□□□□□ -0.61
COL1A1-206ENST00000485870 HSBP1O75506 76 aa11.26□□□□□ -0.61
COL1A1-206ENST00000485870 FAM19A2Q8N3H0 131 aa11.26□□□□□ -0.61
COL1A1-206ENST00000485870 C22orf24Q9Y442 160 aa11.26□□□□□ -0.61
COL1A1-206ENST00000485870 TRAV12-1A0A0B4J245 112 aa11.23□□□□□ -0.61
COL1A1-206ENST00000485870 PFN2P35080 140 aa11.22□□□□□ -0.61
COL1A1-206ENST00000485870 LBHQ53QV2 105 aaPredicted RBP11.22□□□□□ -0.61
COL1A1-206ENST00000485870 COLCA2A8K830 154 aa11.21□□□□□ -0.61
COL1A1-206ENST00000485870 SERF1AO75920 110 aa11.21□□□□□ -0.61
COL1A1-206ENST00000485870 MRPL55Q7Z7F7 128 aaKnown RBP11.21□□□□□ -0.61
COL1A1-206ENST00000485870 DIRC1Q969H9 104 aa11.21□□□□□ -0.61
COL1A1-206ENST00000485870 ZNF625Q96I27 306 aaPredicted RBP11.21□□□□□ -0.61
COL1A1-206ENST00000485870 LINC00310P59036 64 aa11.2□□□□□ -0.62
COL1A1-206ENST00000485870 TP73-AS1Q9UF72 201 aa11.2□□□□□ -0.62
COL1A1-206ENST00000485870 PLA2G2DQ9UNK4 145 aa11.2□□□□□ -0.62
COL1A1-206ENST00000485870 H0Y8G0 127 aa11.19□□□□□ -0.62
COL1A1-206ENST00000485870 ERG28Q9UKR5 140 aa11.19□□□□□ -0.62
COL1A1-206ENST00000485870 TMEM223A0PJW6 202 aa11.18□□□□□ -0.62
COL1A1-206ENST00000485870 H0Y9J4 135 aa11.18□□□□□ -0.62
COL1A1-206ENST00000485870 KRTAP10-8P60410 259 aa11.18□□□□□ -0.62
COL1A1-206ENST00000485870 ODF1Q14990 250 aa11.18□□□□□ -0.62
COL1A1-206ENST00000485870 GAGE10A6NGK3 116 aa11.17□□□□□ -0.62
COL1A1-206ENST00000485870 LINC00167Q96N53 147 aa11.17□□□□□ -0.62
COL1A1-206ENST00000485870 RPL37AP8A6NKH3 93 aa11.16□□□□□ -0.62
COL1A1-206ENST00000485870 NUPR1O60356 82 aa11.16□□□□□ -0.62
COL1A1-206ENST00000485870 LEPROTL1O95214 131 aa11.16□□□□□ -0.62
COL1A1-206ENST00000485870 NKAPP1Q8N9T2 125 aa11.16□□□□□ -0.62
COL1A1-206ENST00000485870 SCO1O75880 301 aa11.15□□□□□ -0.62
COL1A1-206ENST00000485870 SFTA2Q6UW10 78 aa11.15□□□□□ -0.62
COL1A1-206ENST00000485870 SND1-IT1Q9HBX3 110 aa11.15□□□□□ -0.62
COL1A1-206ENST00000485870 IGLV5-37A0A075B6J1 123 aa11.14□□□□□ -0.63
COL1A1-206ENST00000485870 COX17Q14061 63 aa11.14□□□□□ -0.63
COL1A1-206ENST00000485870 FABP4P15090 132 aa11.13□□□□□ -0.63
COL1A1-206ENST00000485870 ZNF861PO60384 105 aa11.11□□□□□ -0.63
COL1A1-206ENST00000485870 LINC00158P58513 81 aa11.11□□□□□ -0.63
COL1A1-206ENST00000485870 HSPB8Q9UJY1 196 aa11.11□□□□□ -0.63
COL1A1-206ENST00000485870 A0A0U1RRA0 63 aa11.1□□□□□ -0.63
COL1A1-206ENST00000485870 BCE1O60756 84 aa11.1□□□□□ -0.63
COL1A1-206ENST00000485870 VPREB1P12018 145 aa11.1□□□□□ -0.63
COL1A1-206ENST00000485870 PRR26Q8N8Z3 221 aa11.1□□□□□ -0.63
COL1A1-206ENST00000485870 IGKV2-28A0A075B6P5 120 aa11.09□□□□□ -0.63
COL1A1-206ENST00000485870 IGKV2D-28P01615 120 aa11.09□□□□□ -0.63
COL1A1-206ENST00000485870 KRTAP1-4P0C5Y4 121 aa11.08□□□□□ -0.64
COL1A1-206ENST00000485870 RPL24P83731 157 aaKnown RBP11.08□□□□□ -0.64
COL1A1-206ENST00000485870 PMCHL2Q9BQD1 86 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms