RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 C6orf48Q9UBA6 75 aa9.33□□□□□ -0.92
HLA-DQB1-208ENST00000484729 PYGO1Q9Y3Y4 419 aa9.33□□□□□ -0.92
HLA-DQB1-208ENST00000484729 IGLV4-3A0A075B6K6 122 aa9.32□□□□□ -0.92
HLA-DQB1-208ENST00000484729 LINC01549A6NIU2 74 aa9.32□□□□□ -0.92
HLA-DQB1-208ENST00000484729 GAGE2EQ4V326 116 aa9.32□□□□□ -0.92
HLA-DQB1-208ENST00000484729 GAGE2DQ9UEU5 116 aa9.32□□□□□ -0.92
HLA-DQB1-208ENST00000484729 IGLV7-43P04211 117 aa9.31□□□□□ -0.92
HLA-DQB1-208ENST00000484729 TLX1NBP0CAT3 122 aa9.31□□□□□ -0.92
HLA-DQB1-208ENST00000484729 TEX43Q6ZNM6 134 aa9.31□□□□□ -0.92
HLA-DQB1-208ENST00000484729 PRR26Q8N8Z3 221 aa9.31□□□□□ -0.92
HLA-DQB1-208ENST00000484729 DIRC1Q969H9 104 aa9.31□□□□□ -0.92
HLA-DQB1-208ENST00000484729 URB1-AS1Q96HZ7 61 aa9.31□□□□□ -0.92
HLA-DQB1-208ENST00000484729 SCGB3A1Q96QR1 104 aa9.31□□□□□ -0.92
HLA-DQB1-208ENST00000484729 C2orf88Q9BSF0 95 aa9.31□□□□□ -0.92
HLA-DQB1-208ENST00000484729 HBDP02042 147 aa9.3□□□□□ -0.92
HLA-DQB1-208ENST00000484729 PMCHL1Q16048 86 aa9.3□□□□□ -0.92
HLA-DQB1-208ENST00000484729 PAPPA-AS1Q5QFB9 102 aa9.3□□□□□ -0.92
HLA-DQB1-208ENST00000484729 CHCHD1Q96BP2 118 aaKnown RBP9.3□□□□□ -0.92
HLA-DQB1-208ENST00000484729 TIMM17AQ99595 171 aa9.3□□□□□ -0.92
HLA-DQB1-208ENST00000484729 IGIPA6NJ69 53 aa9.29□□□□□ -0.92
HLA-DQB1-208ENST00000484729 NPSP0C0P6 89 aa9.29□□□□□ -0.92
HLA-DQB1-208ENST00000484729 LINC00242Q5T6M2 205 aa9.29□□□□□ -0.92
HLA-DQB1-208ENST00000484729 ERASQ7Z444 233 aa9.29□□□□□ -0.92
HLA-DQB1-208ENST00000484729 KRTAP11-1Q8IUC1 163 aa9.29□□□□□ -0.92
HLA-DQB1-208ENST00000484729 A0A0U1RQV1 116 aa9.28□□□□□ -0.92
HLA-DQB1-208ENST00000484729 M0QXV9 152 aa9.28□□□□□ -0.92
HLA-DQB1-208ENST00000484729 KIAA0087Q14695 138 aa9.28□□□□□ -0.92
HLA-DQB1-208ENST00000484729 C2orf82Q6UX34 121 aa9.28□□□□□ -0.92
HLA-DQB1-208ENST00000484729 VCX2Q9H322 139 aa9.28□□□□□ -0.92
HLA-DQB1-208ENST00000484729 H0Y9J4 135 aa9.27□□□□□ -0.93
HLA-DQB1-208ENST00000484729 HSBP1O75506 76 aa9.27□□□□□ -0.93
HLA-DQB1-208ENST00000484729 UBE2BP63146 152 aa9.27□□□□□ -0.93
HLA-DQB1-208ENST00000484729 PACRGQ96M98 296 aaPredicted RBP9.27□□□□□ -0.93
HLA-DQB1-208ENST00000484729 A0A096LNJ9 63 aa9.26□□□□□ -0.93
HLA-DQB1-208ENST00000484729 TRBV30A0A0K0K1B3 111 aa9.26□□□□□ -0.93
HLA-DQB1-208ENST00000484729 SERF1AO75920 110 aa9.26□□□□□ -0.93
HLA-DQB1-208ENST00000484729 UBE2D1P51668 147 aa9.26□□□□□ -0.93
HLA-DQB1-208ENST00000484729 PRR4Q16378 134 aa9.26□□□□□ -0.93
HLA-DQB1-208ENST00000484729 ZC2HC1BQ5TFG8 222 aa9.26□□□□□ -0.93
HLA-DQB1-208ENST00000484729 LINC00173Q6ZV60 143 aa9.26□□□□□ -0.93
HLA-DQB1-208ENST00000484729 FAT4Q6V0I7 4981 aa9.25□□□□□ -0.93
HLA-DQB1-208ENST00000484729 NDUFC2-KCTD14E9PQ53 114 aa9.25□□□□□ -0.93
HLA-DQB1-208ENST00000484729 LCE2AQ5TA79 106 aaPredicted RBP9.25□□□□□ -0.93
HLA-DQB1-208ENST00000484729 KRTAP7-1Q8IUC3 87 aa9.25□□□□□ -0.93
HLA-DQB1-208ENST00000484729 AMELXQ99217 191 aa9.25□□□□□ -0.93
HLA-DQB1-208ENST00000484729 HIST1H2BKO60814 126 aa9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 ATP5LO75964 103 aa9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 HIST1H2BJP06899 126 aa9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 PRSS2P07478 247 aa9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 HIST1H2BOP23527 126 aa9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 HIST1H2BBP33778 126 aa9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 NDUFA6P56556 154 aa9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 HIST1H2BDP58876 126 aa9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 HIST1H2BCP62807 126 aa9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 HIST2H2BEQ16778 126 aa9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 PDZD11Q5EBL8 140 aa9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 C9orf129Q5T035 196 aaKnown RBP9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 FAM19A2Q8N3H0 131 aa9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 HIST1H2BHQ93079 126 aa9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 HIST1H2BNQ99877 126 aa9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 HIST1H2BMQ99879 126 aa9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 TOMM7Q9P0U1 55 aa9.23□□□□□ -0.93
HLA-DQB1-208ENST00000484729 PMVKQ15126 192 aa9.22□□□□□ -0.93
HLA-DQB1-208ENST00000484729 LINC01561Q8N1V8 128 aa9.22□□□□□ -0.93
HLA-DQB1-208ENST00000484729 IGLV1-50A0A075B6I6 118 aa9.21□□□□□ -0.94
HLA-DQB1-208ENST00000484729 LINC00310P59036 64 aa9.21□□□□□ -0.94
HLA-DQB1-208ENST00000484729 CKS1BP61024 79 aa9.21□□□□□ -0.94
HLA-DQB1-208ENST00000484729 SEC11AP67812 179 aa9.21□□□□□ -0.94
HLA-DQB1-208ENST00000484729 GEMIN7Q9H840 131 aaKnown RBP9.21□□□□□ -0.94
HLA-DQB1-208ENST00000484729 HERVK_113P63121 156 aa9.2□□□□□ -0.94
HLA-DQB1-208ENST00000484729 CST9LQ9H4G1 147 aa9.2□□□□□ -0.94
HLA-DQB1-208ENST00000484729 KRTAP1-4P0C5Y4 121 aa9.19□□□□□ -0.94
HLA-DQB1-208ENST00000484729 C6orf226Q5I0X4 101 aa9.19□□□□□ -0.94
HLA-DQB1-208ENST00000484729 LINC00469Q8N7U9 141 aa9.19□□□□□ -0.94
HLA-DQB1-208ENST00000484729 IFI27L1Q96BM0 104 aa9.19□□□□□ -0.94
HLA-DQB1-208ENST00000484729 NUPR1O60356 82 aa9.18□□□□□ -0.94
HLA-DQB1-208ENST00000484729 LEPROTL1O95214 131 aa9.18□□□□□ -0.94
HLA-DQB1-208ENST00000484729 FAM19A3Q7Z5A8 133 aa9.18□□□□□ -0.94
HLA-DQB1-208ENST00000484729 Q8IZM0 81 aa9.17□□□□□ -0.94
HLA-DQB1-208ENST00000484729 XAGE1AQ9HD64 81 aa9.17□□□□□ -0.94
HLA-DQB1-208ENST00000484729 HSPB8Q9UJY1 196 aa9.17□□□□□ -0.94
HLA-DQB1-208ENST00000484729 TINCRA0A1B0GVN0 87 aa9.16□□□□□ -0.94
HLA-DQB1-208ENST00000484729 H0Y8G0 127 aa9.16□□□□□ -0.94
HLA-DQB1-208ENST00000484729 FABP4P15090 132 aa9.16□□□□□ -0.94
HLA-DQB1-208ENST00000484729 RPL13AP40429 203 aaKnown RBP9.15□□□□□ -0.94
HLA-DQB1-208ENST00000484729 CDKN2A-AS1Q9UH64 79 aa9.15□□□□□ -0.94
HLA-DQB1-208ENST00000484729 C22orf24Q9Y442 160 aa9.15□□□□□ -0.94
HLA-DQB1-208ENST00000484729 LBHQ53QV2 105 aaPredicted RBP9.14□□□□□ -0.95
HLA-DQB1-208ENST00000484729 CHTOPQ9Y3Y2 248 aaKnown RBP9.14□□□□□ -0.95
HLA-DQB1-208ENST00000484729 TRAV12-1A0A0B4J245 112 aa9.13□□□□□ -0.95
HLA-DQB1-208ENST00000484729 F8VRH5 84 aa9.13□□□□□ -0.95
HLA-DQB1-208ENST00000484729 H3BRM9 83 aa9.13□□□□□ -0.95
HLA-DQB1-208ENST00000484729 ZNF861PO60384 105 aa9.13□□□□□ -0.95
HLA-DQB1-208ENST00000484729 IGLC3P0DOY3 106 aa9.13□□□□□ -0.95
HLA-DQB1-208ENST00000484729 IGLV5-45A0A087WSX0 123 aa9.11□□□□□ -0.95
HLA-DQB1-208ENST00000484729 CXCL5P42830 114 aa9.11□□□□□ -0.95
HLA-DQB1-208ENST00000484729 COA6Q5JTJ3 125 aaKnown RBP9.11□□□□□ -0.95
HLA-DQB1-208ENST00000484729 MAP1LC3CQ9BXW4 147 aa9.11□□□□□ -0.95
HLA-DQB1-208ENST00000484729 C11orf86A6NJI1 115 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms