RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 WFDC10AQ9H1F0 79 aa13.75□□□□□ -0.21
RPUSD3-216ENST00000484134 TRAV25A0A0B4J276 109 aa13.75□□□□□ -0.21
RPUSD3-216ENST00000484134 ORMDL1Q9P0S3 153 aa13.74□□□□□ -0.21
RPUSD3-216ENST00000484134 TRGV4A0A0C4DH28 118 aa13.74□□□□□ -0.21
RPUSD3-216ENST00000484134 RPS28P62857 69 aaKnown RBP13.74□□□□□ -0.21
RPUSD3-216ENST00000484134 PRR3P79522 188 aaKnown RBP13.74□□□□□ -0.21
RPUSD3-216ENST00000484134 CCKP06307 115 aa13.73□□□□□ -0.21
RPUSD3-216ENST00000484134 ZNF469Q96JG9 3925 aaPredicted RBP13.73□□□□□ -0.21
RPUSD3-216ENST00000484134 LINC00959A0A1B0GUT2 108 aa13.72□□□□□ -0.21
RPUSD3-216ENST00000484134 HILS1P60008 231 aa13.72□□□□□ -0.21
RPUSD3-216ENST00000484134 NANOS2P60321 138 aaKnown RBP13.72□□□□□ -0.21
RPUSD3-216ENST00000484134 C6orf226Q5I0X4 101 aa13.72□□□□□ -0.21
RPUSD3-216ENST00000484134 FHL2Q14192 279 aa13.72□□□□□ -0.21
RPUSD3-216ENST00000484134 WFDC9Q8NEX5 89 aa13.71□□□□□ -0.21
RPUSD3-216ENST00000484134 DPH3Q96FX2 82 aa13.71□□□□□ -0.21
RPUSD3-216ENST00000484134 C16orf74Q96GX8 76 aa13.71□□□□□ -0.21
RPUSD3-216ENST00000484134 RPL35AP18077 110 aaKnown RBP13.7□□□□□ -0.22
RPUSD3-216ENST00000484134 SMIM9A6NGZ8 99 aa13.69□□□□□ -0.22
RPUSD3-216ENST00000484134 OXTP01178 125 aa13.69□□□□□ -0.22
RPUSD3-216ENST00000484134 LINC00167Q96N53 147 aa13.69□□□□□ -0.22
RPUSD3-216ENST00000484134 XCL1P47992 114 aa13.69□□□□□ -0.22
RPUSD3-216ENST00000484134 FN1P02751 2386 aaKnown RBP13.68□□□□□ -0.22
RPUSD3-216ENST00000484134 CCL24O00175 119 aa13.68□□□□□ -0.22
RPUSD3-216ENST00000484134 TMEM258P61165 79 aa13.68□□□□□ -0.22
RPUSD3-216ENST00000484134 DSCR8Q96T75 97 aa13.68□□□□□ -0.22
RPUSD3-216ENST00000484134 Q8N814 137 aa13.67□□□□□ -0.22
RPUSD3-216ENST00000484134 CSNK1G2-AS1Q8NCQ2 148 aa13.67□□□□□ -0.22
RPUSD3-216ENST00000484134 FAM19A1Q7Z5A9 133 aa13.66□□□□□ -0.22
RPUSD3-216ENST00000484134 CLPSL2Q6UWE3 100 aa13.64□□□□□ -0.23
RPUSD3-216ENST00000484134 C5orf47Q569G3 176 aa13.64□□□□□ -0.23
RPUSD3-216ENST00000484134 TMEM86BQ8N661 226 aa13.63□□□□□ -0.23
RPUSD3-216ENST00000484134 ZFYVE26Q68DK2 2539 aa13.63□□□□□ -0.23
RPUSD3-216ENST00000484134 TRAV23DV6A0A075B6W5 121 aa13.63□□□□□ -0.23
RPUSD3-216ENST00000484134 KRTAP10-9P60411 292 aa13.63□□□□□ -0.23
RPUSD3-216ENST00000484134 C19orf73Q9NVV2 129 aa13.63□□□□□ -0.23
RPUSD3-216ENST00000484134 JMJD7-PLA2G4BH0Y9G9 81 aa13.62□□□□□ -0.23
RPUSD3-216ENST00000484134 ENHOQ6UWT2 76 aa13.62□□□□□ -0.23
RPUSD3-216ENST00000484134 Q8IZM0 81 aa13.62□□□□□ -0.23
RPUSD3-216ENST00000484134 USP24Q9UPU5 2620 aa13.61□□□□□ -0.23
RPUSD3-216ENST00000484134 GHRHP01286 108 aa13.61□□□□□ -0.23
RPUSD3-216ENST00000484134 LYPD5Q6UWN5 251 aa13.61□□□□□ -0.23
RPUSD3-216ENST00000484134 NBEAL2Q6ZNJ1 2754 aa13.6□□□□□ -0.23
RPUSD3-216ENST00000484134 TMEM256-PLSCR3K7ERE1 68 aa13.6□□□□□ -0.23
RPUSD3-216ENST00000484134 Q8NDZ9 215 aa13.6□□□□□ -0.23
RPUSD3-216ENST00000484134 DEFB130BP0DP73 79 aa13.59□□□□□ -0.23
RPUSD3-216ENST00000484134 DEFB130AP0DP74 79 aa13.59□□□□□ -0.23
RPUSD3-216ENST00000484134 RNASE1P07998 156 aaKnown RBP13.58□□□□□ -0.24
RPUSD3-216ENST00000484134 S100A7L2Q5SY68 101 aa13.58□□□□□ -0.24
RPUSD3-216ENST00000484134 APCP25054 2843 aa13.58□□□□□ -0.24
RPUSD3-216ENST00000484134 KIAA0087Q14695 138 aa13.57□□□□□ -0.24
RPUSD3-216ENST00000484134 C9orf116Q5BN46 136 aaPredicted RBP13.57□□□□□ -0.24
RPUSD3-216ENST00000484134 CCDC168Q8NDH2 2452 aa13.57□□□□□ -0.24
RPUSD3-216ENST00000484134 GCN1Q92616 2671 aaKnown RBP13.57□□□□□ -0.24
RPUSD3-216ENST00000484134 GYPEP15421 78 aa13.56□□□□□ -0.24
RPUSD3-216ENST00000484134 ATP5EP2Q5VTU8 51 aa13.56□□□□□ -0.24
RPUSD3-216ENST00000484134 ITPR3Q14573 2671 aa13.55□□□□□ -0.24
RPUSD3-216ENST00000484134 A0A096LPF7 62 aa13.55□□□□□ -0.24
RPUSD3-216ENST00000484134 C6orf99Q4VX62 202 aa13.55□□□□□ -0.24
RPUSD3-216ENST00000484134 ZNF462Q96JM2 2506 aa13.54□□□□□ -0.24
RPUSD3-216ENST00000484134 A0A1B0GUV1 79 aa13.54□□□□□ -0.24
RPUSD3-216ENST00000484134 DNAJC9-AS1A6NH13 148 aa13.54□□□□□ -0.24
RPUSD3-216ENST00000484134 NDUFC2O95298 119 aa13.54□□□□□ -0.24
RPUSD3-216ENST00000484134 ESM1Q9NQ30 184 aa13.53□□□□□ -0.24
RPUSD3-216ENST00000484134 C4orf26Q17RF5 130 aa13.53□□□□□ -0.24
RPUSD3-216ENST00000484134 M0R2N4 97 aa13.52□□□□□ -0.24
RPUSD3-216ENST00000484134 IGLV1-51P01701 117 aa13.52□□□□□ -0.25
RPUSD3-216ENST00000484134 CMC4P56277 68 aaPredicted RBP13.52□□□□□ -0.25
RPUSD3-216ENST00000484134 Q8N3U1 123 aa13.52□□□□□ -0.25
RPUSD3-216ENST00000484134 UBL5Q9BZL1 73 aa13.52□□□□□ -0.25
RPUSD3-216ENST00000484134 Q5XG85 94 aa13.51□□□□□ -0.25
RPUSD3-216ENST00000484134 C20orf197Q8N268 126 aa13.51□□□□□ -0.25
RPUSD3-216ENST00000484134 LINC00575Q6W349 94 aa13.5□□□□□ -0.25
RPUSD3-216ENST00000484134 LINC00269Q8N2A0 174 aa13.5□□□□□ -0.25
RPUSD3-216ENST00000484134 IGLV10-54A0A075B6I4 117 aa13.5□□□□□ -0.25
RPUSD3-216ENST00000484134 Q6ZQT0 140 aa13.5□□□□□ -0.25
RPUSD3-216ENST00000484134 TRBV10-3A0A0K0K1G6 114 aa13.49□□□□□ -0.25
RPUSD3-216ENST00000484134 SPATA3Q8NHX4 192 aa13.49□□□□□ -0.25
RPUSD3-216ENST00000484134 COX17Q14061 63 aa13.48□□□□□ -0.25
RPUSD3-216ENST00000484134 DEFB113Q30KQ7 82 aa13.48□□□□□ -0.25
RPUSD3-216ENST00000484134 BBC3Q96PG8 261 aaPredicted RBP13.48□□□□□ -0.25
RPUSD3-216ENST00000484134 RBM3P98179 157 aaKnown RBP13.47□□□□□ -0.25
RPUSD3-216ENST00000484134 CD164L2Q6UWJ8 174 aa13.47□□□□□ -0.25
RPUSD3-216ENST00000484134 LINC00612Q8N6U2 182 aa13.47□□□□□ -0.25
RPUSD3-216ENST00000484134 CHCHD10Q8WYQ3 142 aaPredicted RBP13.47□□□□□ -0.25
RPUSD3-216ENST00000484134 FLNAP21333 2647 aaKnown RBP13.46□□□□□ -0.25
RPUSD3-216ENST00000484134 IGHV4-28A0A0C4DH34 117 aa13.46□□□□□ -0.25
RPUSD3-216ENST00000484134 MTORP42345 2549 aa13.45□□□□□ -0.26
RPUSD3-216ENST00000484134 KRTAP1-3Q8IUG1 177 aa13.45□□□□□ -0.26
RPUSD3-216ENST00000484134 NDUFC2-KCTD14E9PQ53 114 aa13.44□□□□□ -0.26
RPUSD3-216ENST00000484134 C10orf25Q5T742 122 aa13.44□□□□□ -0.26
RPUSD3-216ENST00000484134 HRCT1Q6UXD1 115 aa13.44□□□□□ -0.26
RPUSD3-216ENST00000484134 LINC01547P58512 204 aaPredicted RBP13.43□□□□□ -0.26
RPUSD3-216ENST00000484134 LINC01006Q8NI28 216 aa13.43□□□□□ -0.26
RPUSD3-216ENST00000484134 LOC110117498A0A087WWA1 95 aa13.42□□□□□ -0.26
RPUSD3-216ENST00000484134 C6orf223Q8N319 242 aa13.42□□□□□ -0.26
RPUSD3-216ENST00000484134 LAMTOR3Q9UHA4 124 aa13.42□□□□□ -0.26
RPUSD3-216ENST00000484134 ZNF561-AS1K7EIQ3 104 aa13.42□□□□□ -0.26
RPUSD3-216ENST00000484134 UBR5O95071 2799 aaPredicted RBP13.42□□□□□ -0.26
RPUSD3-216ENST00000484134 PRB1P04280 392 aa13.41□□□□□ -0.26
RPUSD3-216ENST00000484134 PRO0255Q9UI72 69 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms