RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 LINC00336Q6ZUF6 198 aa9.32□□□□□ -0.92
SMAD9-204ENST00000483941 ORAOV1Q8WV07 137 aa9.32□□□□□ -0.92
SMAD9-204ENST00000483941 NDUFA12Q9UI09 145 aa9.32□□□□□ -0.92
SMAD9-204ENST00000483941 ZNF561-AS1K7EIQ3 104 aa9.31□□□□□ -0.92
SMAD9-204ENST00000483941 CKS1BP61024 79 aa9.31□□□□□ -0.92
SMAD9-204ENST00000483941 KRTAP26-1Q6PEX3 210 aa9.31□□□□□ -0.92
SMAD9-204ENST00000483941 TOMM7Q9P0U1 55 aa9.31□□□□□ -0.92
SMAD9-204ENST00000483941 A0A1B0GVY2 172 aa9.3□□□□□ -0.92
SMAD9-204ENST00000483941 NDUFA1O15239 70 aa9.3□□□□□ -0.92
SMAD9-204ENST00000483941 CIRBPQ14011 172 aaKnown RBP9.3□□□□□ -0.92
SMAD9-204ENST00000483941 C14orf177Q52M58 125 aa9.3□□□□□ -0.92
SMAD9-204ENST00000483941 SCGB1D4Q6XE38 83 aa9.3□□□□□ -0.92
SMAD9-204ENST00000483941 PCP2Q8IVA1 136 aa9.3□□□□□ -0.92
SMAD9-204ENST00000483941 PRO1933Q9H354 126 aa9.3□□□□□ -0.92
SMAD9-204ENST00000483941 GCSHP23434 173 aa9.29□□□□□ -0.92
SMAD9-204ENST00000483941 SPAG11BQ08648 103 aa9.29□□□□□ -0.92
SMAD9-204ENST00000483941 KRTAP1-5Q9BYS1 174 aa9.28□□□□□ -0.92
SMAD9-204ENST00000483941 HIGD1BQ9P298 99 aa9.28□□□□□ -0.92
SMAD9-204ENST00000483941 HNRNPA3P51991 378 aaKnown RBP9.27□□□□□ -0.93
SMAD9-204ENST00000483941 TSPEAR-AS2P59090 65 aa9.27□□□□□ -0.93
SMAD9-204ENST00000483941 Q6ZR54 194 aa9.27□□□□□ -0.93
SMAD9-204ENST00000483941 C6orf223Q8N319 242 aa9.27□□□□□ -0.93
SMAD9-204ENST00000483941 C2orf48Q96LS8 159 aa9.27□□□□□ -0.93
SMAD9-204ENST00000483941 KRTAP4-5Q9BYR2 181 aa9.27□□□□□ -0.93
SMAD9-204ENST00000483941 HERC1Q15751 4861 aa9.27□□□□□ -0.93
SMAD9-204ENST00000483941 GVQW2A0A096LPI5 108 aaPredicted RBP9.26□□□□□ -0.93
SMAD9-204ENST00000483941 C1orf134Q5TEV5 83 aa9.26□□□□□ -0.93
SMAD9-204ENST00000483941 MAPKAPK5-AS1Q8N8E1 139 aa9.26□□□□□ -0.93
SMAD9-204ENST00000483941 ZNF625Q96I27 306 aaPredicted RBP9.26□□□□□ -0.93
SMAD9-204ENST00000483941 TMEM238C9JI98 176 aa9.25□□□□□ -0.93
SMAD9-204ENST00000483941 M0R2N4 97 aa9.25□□□□□ -0.93
SMAD9-204ENST00000483941 TIMM17BO60830 172 aa9.25□□□□□ -0.93
SMAD9-204ENST00000483941 DDTP30046 118 aa9.25□□□□□ -0.93
SMAD9-204ENST00000483941 KIAA0087Q14695 138 aa9.25□□□□□ -0.93
SMAD9-204ENST00000483941 Q6ZVH6 145 aa9.25□□□□□ -0.93
SMAD9-204ENST00000483941 COPS9Q8WXC6 57 aa9.25□□□□□ -0.93
SMAD9-204ENST00000483941 USP17L23D6RBM5 183 aa9.24□□□□□ -0.93
SMAD9-204ENST00000483941 COX17Q14061 63 aa9.24□□□□□ -0.93
SMAD9-204ENST00000483941 NTN5Q8WTR8 489 aaPredicted RBP9.24□□□□□ -0.93
SMAD9-204ENST00000483941 TTTY13Q9BZ97 58 aa9.24□□□□□ -0.93
SMAD9-204ENST00000483941 LRP1BQ9NZR2 4599 aa9.23□□□□□ -0.93
SMAD9-204ENST00000483941 A0A0J9YXY3 114 aa9.23□□□□□ -0.93
SMAD9-204ENST00000483941 TAL2Q16559 108 aa9.23□□□□□ -0.93
SMAD9-204ENST00000483941 MEIG1Q5JSS6 88 aa9.23□□□□□ -0.93
SMAD9-204ENST00000483941 C15orf56Q8N910 161 aa9.23□□□□□ -0.93
SMAD9-204ENST00000483941 CAMK2N2Q96S95 79 aa9.23□□□□□ -0.93
SMAD9-204ENST00000483941 TRBV30A0A0K0K1B3 111 aa9.22□□□□□ -0.93
SMAD9-204ENST00000483941 SRSF9Q13242 221 aaKnown RBP eCLIP9.22□□□□□ -0.93
SMAD9-204ENST00000483941 HIGD2BQ4VC39 106 aa9.21□□□□□ -0.94
SMAD9-204ENST00000483941 SPANXB1Q9NS25 103 aaPredicted RBP9.21□□□□□ -0.94
SMAD9-204ENST00000483941 PKIGQ9Y2B9 76 aa9.21□□□□□ -0.94
SMAD9-204ENST00000483941 APOBP04114 4563 aaKnown RBP9.21□□□□□ -0.94
SMAD9-204ENST00000483941 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.2□□□□□ -0.94
SMAD9-204ENST00000483941 PCP4L1A6NKN8 68 aa9.2□□□□□ -0.94
SMAD9-204ENST00000483941 EREGO14944 169 aa9.2□□□□□ -0.94
SMAD9-204ENST00000483941 HSD52Q0P140 79 aa9.2□□□□□ -0.94
SMAD9-204ENST00000483941 SYCNQ0VAF6 134 aa9.2□□□□□ -0.94
SMAD9-204ENST00000483941 RNF151Q2KHN1 245 aa9.2□□□□□ -0.94
SMAD9-204ENST00000483941 HIST1H4GQ99525 98 aa9.2□□□□□ -0.94
SMAD9-204ENST00000483941 M0R143 59 aa9.19□□□□□ -0.94
SMAD9-204ENST00000483941 RTL8CO15255 209 aa9.19□□□□□ -0.94
SMAD9-204ENST00000483941 LINC00158P58513 81 aa9.19□□□□□ -0.94
SMAD9-204ENST00000483941 Q6ZRN7 208 aaPredicted RBP9.19□□□□□ -0.94
SMAD9-204ENST00000483941 C2orf91Q6ZV80 131 aa9.19□□□□□ -0.94
SMAD9-204ENST00000483941 ERG28Q9UKR5 140 aa9.19□□□□□ -0.94
SMAD9-204ENST00000483941 IFITM1P13164 125 aa9.18□□□□□ -0.94
SMAD9-204ENST00000483941 C2orf82Q6UX34 121 aa9.18□□□□□ -0.94
SMAD9-204ENST00000483941 SPANXDQ9BXN6 97 aa9.18□□□□□ -0.94
SMAD9-204ENST00000483941 SPANXCQ9NY87 97 aa9.18□□□□□ -0.94
SMAD9-204ENST00000483941 CTAG1AP78358 180 aa9.17□□□□□ -0.94
SMAD9-204ENST00000483941 UNQ6190/PRO20217Q6UXQ8 127 aa9.17□□□□□ -0.94
SMAD9-204ENST00000483941 CARD19Q96LW7 228 aa9.17□□□□□ -0.94
SMAD9-204ENST00000483941 TP73-AS1Q9UF72 201 aa9.17□□□□□ -0.94
SMAD9-204ENST00000483941 TMEM238LA0A1B0GVL6 79 aa9.16□□□□□ -0.94
SMAD9-204ENST00000483941 A6NJY4 79 aa9.16□□□□□ -0.94
SMAD9-204ENST00000483941 SMIM13P0DJ93 91 aa9.16□□□□□ -0.94
SMAD9-204ENST00000483941 CNBPP62633 177 aaKnown RBP9.16□□□□□ -0.94
SMAD9-204ENST00000483941 PPDPFQ9H3Y8 114 aa9.16□□□□□ -0.94
SMAD9-204ENST00000483941 LRCOL1A6NCL2 159 aa9.15□□□□□ -0.94
SMAD9-204ENST00000483941 LECT2O14960 151 aa9.15□□□□□ -0.94
SMAD9-204ENST00000483941 PFN2P35080 140 aa9.15□□□□□ -0.94
SMAD9-204ENST00000483941 PTTG1IPP53801 180 aa9.15□□□□□ -0.94
SMAD9-204ENST00000483941 RPL24P83731 157 aaKnown RBP9.15□□□□□ -0.94
SMAD9-204ENST00000483941 LINC00526Q96FQ7 95 aa9.15□□□□□ -0.94
SMAD9-204ENST00000483941 Q6ZRU5 148 aa9.14□□□□□ -0.95
SMAD9-204ENST00000483941 CEND1Q8N111 149 aa9.14□□□□□ -0.95
SMAD9-204ENST00000483941 A0A087WTM6 91 aa9.13□□□□□ -0.95
SMAD9-204ENST00000483941 LITAFQ99732 161 aa9.13□□□□□ -0.95
SMAD9-204ENST00000483941 C6orf48Q9UBA6 75 aa9.13□□□□□ -0.95
SMAD9-204ENST00000483941 NDUFC2-KCTD14E9PQ53 114 aa9.12□□□□□ -0.95
SMAD9-204ENST00000483941 TLX1NBP0CAT3 122 aa9.12□□□□□ -0.95
SMAD9-204ENST00000483941 C10orf25Q5T742 122 aa9.12□□□□□ -0.95
SMAD9-204ENST00000483941 MIR7-3HGQ8N6C7 128 aa9.12□□□□□ -0.95
SMAD9-204ENST00000483941 Q8N814 137 aa9.12□□□□□ -0.95
SMAD9-204ENST00000483941 DNAH5Q8TE73 4624 aa9.11□□□□□ -0.95
SMAD9-204ENST00000483941 A0A0U1RRA0 63 aa9.11□□□□□ -0.95
SMAD9-204ENST00000483941 ADAMTSL4-AS1Q5T5F5 129 aa9.11□□□□□ -0.95
SMAD9-204ENST00000483941 LOC107984640A0A0U1RRK4 108 aa9.1□□□□□ -0.95
SMAD9-204ENST00000483941 A6NDN8 102 aa9.1□□□□□ -0.95
SMAD9-204ENST00000483941 MUSTN1Q8IVN3 82 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms