RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 TRBV10-3A0A0K0K1G6 114 aa8.24□□□□□ -1.09
VTI1A-205ENST00000483122 LOC100131303A0A0U1RQF7 123 aa8.24□□□□□ -1.09
VTI1A-205ENST00000483122 J3QLI3 93 aa8.24□□□□□ -1.09
VTI1A-205ENST00000483122 NANOS2P60321 138 aaKnown RBP8.24□□□□□ -1.09
VTI1A-205ENST00000483122 PRR3P79522 188 aaKnown RBP8.24□□□□□ -1.09
VTI1A-205ENST00000483122 C16orf95Q9H693 158 aa8.24□□□□□ -1.09
VTI1A-205ENST00000483122 SNURFQ9Y675 71 aa8.24□□□□□ -1.09
VTI1A-205ENST00000483122 CENPEQ02224 2701 aa8.24□□□□□ -1.09
VTI1A-205ENST00000483122 HECTD1Q9ULT8 2610 aa8.24□□□□□ -1.09
VTI1A-205ENST00000483122 CSPG4Q6UVK1 2322 aa8.24□□□□□ -1.09
VTI1A-205ENST00000483122 APCP25054 2843 aa8.24□□□□□ -1.09
VTI1A-205ENST00000483122 IGLV4-60A0A075B6I1 120 aa8.24□□□□□ -1.09
VTI1A-205ENST00000483122 TRAV7A0A075B6U4 112 aa8.24□□□□□ -1.09
VTI1A-205ENST00000483122 IGHV3OR16-9A0A0B4J2B5 98 aa8.24□□□□□ -1.09
VTI1A-205ENST00000483122 DSCR9P59020 149 aa8.24□□□□□ -1.09
VTI1A-205ENST00000483122 RMI2Q96E14 147 aa8.24□□□□□ -1.09
VTI1A-205ENST00000483122 UNC79Q9P2D8 2635 aa8.24□□□□□ -1.09
VTI1A-205ENST00000483122 CSMD2Q7Z408 3487 aa8.24□□□□□ -1.09
VTI1A-205ENST00000483122 TRAV10A0A0B4J240 114 aa8.23□□□□□ -1.09
VTI1A-205ENST00000483122 FP248Q71RG6 208 aaPredicted RBP8.23□□□□□ -1.09
VTI1A-205ENST00000483122 IL17DQ8TAD2 202 aa8.23□□□□□ -1.09
VTI1A-205ENST00000483122 BAHCC1Q9P281 2608 aa8.23□□□□□ -1.09
VTI1A-205ENST00000483122 TMEM256-PLSCR3K7ERE1 68 aa8.23□□□□□ -1.09
VTI1A-205ENST00000483122 C1orf158Q8N1D5 194 aa8.23□□□□□ -1.09
VTI1A-205ENST00000483122 C1orf43Q9BWL3 253 aa8.23□□□□□ -1.09
VTI1A-205ENST00000483122 ANKRD17O75179 2603 aaKnown RBP8.23□□□□□ -1.09
VTI1A-205ENST00000483122 M0R2N4 97 aa8.22□□□□□ -1.09
VTI1A-205ENST00000483122 DEFB112Q30KQ8 113 aa8.22□□□□□ -1.09
VTI1A-205ENST00000483122 WFDC11Q8NEX6 87 aa8.21□□□□□ -1.09
VTI1A-205ENST00000483122 ABCA12Q86UK0 2595 aa8.21□□□□□ -1.1
VTI1A-205ENST00000483122 A0A087WZ39 114 aa8.21□□□□□ -1.1
VTI1A-205ENST00000483122 F8WEM9 126 aa8.21□□□□□ -1.1
VTI1A-205ENST00000483122 KLKP1Q107X0 134 aa8.21□□□□□ -1.1
VTI1A-205ENST00000483122 PKIGQ9Y2B9 76 aa8.21□□□□□ -1.1
VTI1A-205ENST00000483122 RPL35AP18077 110 aaKnown RBP8.2□□□□□ -1.1
VTI1A-205ENST00000483122 IGHV4-30-2A0A087WSY4 118 aa8.2□□□□□ -1.1
VTI1A-205ENST00000483122 MSMBP08118 114 aa8.2□□□□□ -1.1
VTI1A-205ENST00000483122 LINC00474Q9P2X8 69 aa8.2□□□□□ -1.1
VTI1A-205ENST00000483122 MAP1AP78559 2803 aaPredicted RBP8.2□□□□□ -1.1
VTI1A-205ENST00000483122 SPG11Q96JI7 2443 aa8.19□□□□□ -1.1
VTI1A-205ENST00000483122 C6orf226Q5I0X4 101 aa8.19□□□□□ -1.1
VTI1A-205ENST00000483122 LINC00482Q8N8I6 264 aa8.19□□□□□ -1.1
VTI1A-205ENST00000483122 SMIM26A0A096LP01 95 aa8.19□□□□□ -1.1
VTI1A-205ENST00000483122 LINC01547P58512 204 aaPredicted RBP8.19□□□□□ -1.1
VTI1A-205ENST00000483122 Q6ZQT0 140 aa8.19□□□□□ -1.1
VTI1A-205ENST00000483122 PDZD2O15018 2839 aa8.18□□□□□ -1.1
VTI1A-205ENST00000483122 HAMPP81172 84 aa8.18□□□□□ -1.1
VTI1A-205ENST00000483122 KRTAP1-3Q8IUG1 177 aa8.18□□□□□ -1.1
VTI1A-205ENST00000483122 NOP10Q9NPE3 64 aaKnown RBP8.18□□□□□ -1.1
VTI1A-205ENST00000483122 BCE1O60756 84 aa8.18□□□□□ -1.1
VTI1A-205ENST00000483122 POLQO75417 2590 aa8.17□□□□□ -1.1
VTI1A-205ENST00000483122 TMEM86BQ8N661 226 aa8.17□□□□□ -1.1
VTI1A-205ENST00000483122 ITPR2Q14571 2701 aa8.17□□□□□ -1.1
VTI1A-205ENST00000483122 NAV2Q8IVL1 2488 aa8.17□□□□□ -1.1
VTI1A-205ENST00000483122 KHDC1LQ5JSQ8 128 aa8.17□□□□□ -1.1
VTI1A-205ENST00000483122 DYNLRB2Q8TF09 96 aa8.17□□□□□ -1.1
VTI1A-205ENST00000483122 Q6ZVQ6 151 aa8.16□□□□□ -1.1
VTI1A-205ENST00000483122 NOTCH3Q9UM47 2321 aa8.16□□□□□ -1.1
VTI1A-205ENST00000483122 TRBV7-6A0A0J9YX20 115 aa8.15□□□□□ -1.1
VTI1A-205ENST00000483122 RBM3P98179 157 aaKnown RBP8.15□□□□□ -1.1
VTI1A-205ENST00000483122 ODF3L2Q3SX64 289 aa8.15□□□□□ -1.1
VTI1A-205ENST00000483122 ZNF702PQ9H963 129 aa8.15□□□□□ -1.1
VTI1A-205ENST00000483122 CUBNO60494 3623 aa8.15□□□□□ -1.1
VTI1A-205ENST00000483122 LINC00959A0A1B0GUT2 108 aa8.15□□□□□ -1.1
VTI1A-205ENST00000483122 C6orf99Q4VX62 202 aa8.15□□□□□ -1.1
VTI1A-205ENST00000483122 DEFB114Q30KQ6 69 aa8.14□□□□□ -1.11
VTI1A-205ENST00000483122 STHQ8IWL8 128 aa8.14□□□□□ -1.11
VTI1A-205ENST00000483122 SPATA3Q8NHX4 192 aa8.14□□□□□ -1.11
VTI1A-205ENST00000483122 TM2D3Q9BRN9 247 aa8.14□□□□□ -1.11
VTI1A-205ENST00000483122 TRBV6-8A0A0A6YYG3 113 aa8.14□□□□□ -1.11
VTI1A-205ENST00000483122 Q8NDZ9 215 aa8.13□□□□□ -1.11
VTI1A-205ENST00000483122 LAMTOR3Q9UHA4 124 aa8.13□□□□□ -1.11
VTI1A-205ENST00000483122 TRGV2A0A075B6R0 118 aa8.13□□□□□ -1.11
VTI1A-205ENST00000483122 LOC110117498A0A087WWA1 95 aa8.13□□□□□ -1.11
VTI1A-205ENST00000483122 LINC00575Q6W349 94 aa8.13□□□□□ -1.11
VTI1A-205ENST00000483122 SCXQ7RTU7 201 aa8.12□□□□□ -1.11
VTI1A-205ENST00000483122 ZNF561-AS1K7EIQ3 104 aa8.12□□□□□ -1.11
VTI1A-205ENST00000483122 Q8N3U1 123 aa8.12□□□□□ -1.11
VTI1A-205ENST00000483122 CR1P17927 2039 aa8.12□□□□□ -1.11
VTI1A-205ENST00000483122 AKAP9Q99996 3911 aa8.11□□□□□ -1.11
VTI1A-205ENST00000483122 CLPSL2Q6UWE3 100 aa8.11□□□□□ -1.11
VTI1A-205ENST00000483122 C6orf223Q8N319 242 aa8.11□□□□□ -1.11
VTI1A-205ENST00000483122 BRK1Q8WUW1 75 aa8.11□□□□□ -1.11
VTI1A-205ENST00000483122 FLNBO75369 2602 aaKnown RBP8.11□□□□□ -1.11
VTI1A-205ENST00000483122 TRGV4A0A0C4DH28 118 aa8.11□□□□□ -1.11
VTI1A-205ENST00000483122 A0A0U1RQV1 116 aa8.11□□□□□ -1.11
VTI1A-205ENST00000483122 PLAC8L1A1L4L8 177 aa8.11□□□□□ -1.11
VTI1A-205ENST00000483122 Q8IZM0 81 aa8.11□□□□□ -1.11
VTI1A-205ENST00000483122 TRBV7-4A0A0J9YYF1 115 aa8.1□□□□□ -1.11
VTI1A-205ENST00000483122 B4DSR2 109 aa8.1□□□□□ -1.11
VTI1A-205ENST00000483122 FAM229BQ4G0N7 80 aa8.1□□□□□ -1.11
VTI1A-205ENST00000483122 C9orf116Q5BN46 136 aaPredicted RBP8.1□□□□□ -1.11
VTI1A-205ENST00000483122 LINC01356Q8N9X3 169 aa8.1□□□□□ -1.11
VTI1A-205ENST00000483122 F8WDY8 70 aa8.09□□□□□ -1.11
VTI1A-205ENST00000483122 MIFP14174 115 aa8.09□□□□□ -1.11
VTI1A-205ENST00000483122 CXCL6P80162 114 aa8.09□□□□□ -1.11
VTI1A-205ENST00000483122 MAPK1IP1LQ8NDC0 245 aa8.09□□□□□ -1.11
VTI1A-205ENST00000483122 IGHV4-31P0DP07 118 aa8.08□□□□□ -1.12
VTI1A-205ENST00000483122 C11orf44Q8N8P7 122 aa8.08□□□□□ -1.12
VTI1A-205ENST00000483122 A0A1W2PRX2 142 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms