RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 DSCR8Q96T75 97 aa10.14□□□□□ -0.79
COL9A2-207ENST00000482722 IGKV2-28A0A075B6P5 120 aa10.13□□□□□ -0.79
COL9A2-207ENST00000482722 IGKV2D-28P01615 120 aa10.13□□□□□ -0.79
COL9A2-207ENST00000482722 LINC01561Q8N1V8 128 aa10.13□□□□□ -0.79
COL9A2-207ENST00000482722 IGKV3OR2-268A0A0C4DH90 116 aa10.13□□□□□ -0.79
COL9A2-207ENST00000482722 TMEM258P61165 79 aa10.13□□□□□ -0.79
COL9A2-207ENST00000482722 C4orf3Q8WVX3 66 aa10.13□□□□□ -0.79
COL9A2-207ENST00000482722 SMIM11BQ8TCY0 68 aa10.12□□□□□ -0.79
COL9A2-207ENST00000482722 FAM19A3Q7Z5A8 133 aa10.12□□□□□ -0.79
COL9A2-207ENST00000482722 STHQ8IWL8 128 aa10.12□□□□□ -0.79
COL9A2-207ENST00000482722 PF4P02776 101 aa10.12□□□□□ -0.79
COL9A2-207ENST00000482722 NTM-AS1Q6ZSK4 140 aa10.12□□□□□ -0.79
COL9A2-207ENST00000482722 MIR7-3HGQ8N6C7 128 aa10.12□□□□□ -0.79
COL9A2-207ENST00000482722 USP17L23D6RBM5 183 aa10.11□□□□□ -0.79
COL9A2-207ENST00000482722 ODF3L2Q3SX64 289 aa10.11□□□□□ -0.79
COL9A2-207ENST00000482722 SND1-IT1Q9HBX3 110 aa10.11□□□□□ -0.79
COL9A2-207ENST00000482722 NCR3O14931 201 aa10.11□□□□□ -0.79
COL9A2-207ENST00000482722 TOMM7Q9P0U1 55 aa10.11□□□□□ -0.79
COL9A2-207ENST00000482722 OBSCN-AS1Q96MR7 158 aa10.1□□□□□ -0.79
COL9A2-207ENST00000482722 F8P00451 2351 aa10.1□□□□□ -0.79
COL9A2-207ENST00000482722 A8MTW9 85 aa10.09□□□□□ -0.79
COL9A2-207ENST00000482722 Q6ZTI0 123 aa10.09□□□□□ -0.79
COL9A2-207ENST00000482722 OVOL2Q9BRP0 275 aa10.09□□□□□ -0.79
COL9A2-207ENST00000482722 LECT2O14960 151 aa10.08□□□□□ -0.8
COL9A2-207ENST00000482722 CDC42SE2Q9NRR3 84 aa10.08□□□□□ -0.8
COL9A2-207ENST00000482722 SLPIP03973 132 aa10.08□□□□□ -0.8
COL9A2-207ENST00000482722 C1orf158Q8N1D5 194 aa10.08□□□□□ -0.8
COL9A2-207ENST00000482722 C4orf26Q17RF5 130 aa10.08□□□□□ -0.8
COL9A2-207ENST00000482722 WFDC10AQ9H1F0 79 aa10.07□□□□□ -0.8
COL9A2-207ENST00000482722 RPL36AP83881 106 aaKnown RBP10.06□□□□□ -0.8
COL9A2-207ENST00000482722 RPL36ALQ969Q0 106 aaKnown RBP10.06□□□□□ -0.8
COL9A2-207ENST00000482722 LINC00158P58513 81 aa10.06□□□□□ -0.8
COL9A2-207ENST00000482722 NOP10Q9NPE3 64 aaKnown RBP10.06□□□□□ -0.8
COL9A2-207ENST00000482722 H0YGX0 51 aa10.05□□□□□ -0.8
COL9A2-207ENST00000482722 WIPF1O43516 503 aa10.05□□□□□ -0.8
COL9A2-207ENST00000482722 LINC01006Q8NI28 216 aa10.05□□□□□ -0.8
COL9A2-207ENST00000482722 CCL18P55774 89 aa10.05□□□□□ -0.8
COL9A2-207ENST00000482722 HILS1P60008 231 aa10.05□□□□□ -0.8
COL9A2-207ENST00000482722 COX7B2Q8TF08 81 aa10.05□□□□□ -0.8
COL9A2-207ENST00000482722 LOC100131303A0A0U1RQF7 123 aa10.04□□□□□ -0.8
COL9A2-207ENST00000482722 CCL24O00175 119 aa10.04□□□□□ -0.8
COL9A2-207ENST00000482722 RPL35AP18077 110 aaKnown RBP10.04□□□□□ -0.8
COL9A2-207ENST00000482722 FHL2Q14192 279 aa10.04□□□□□ -0.8
COL9A2-207ENST00000482722 K7EQD1 137 aa10.04□□□□□ -0.8
COL9A2-207ENST00000482722 UBE2L6O14933 153 aa10.04□□□□□ -0.8
COL9A2-207ENST00000482722 Q5XG85 94 aa10.04□□□□□ -0.8
COL9A2-207ENST00000482722 PFN2P35080 140 aa10.03□□□□□ -0.8
COL9A2-207ENST00000482722 HRCT1Q6UXD1 115 aa10.03□□□□□ -0.8
COL9A2-207ENST00000482722 WFDC9Q8NEX5 89 aa10.03□□□□□ -0.8
COL9A2-207ENST00000482722 TRAV25A0A0B4J276 109 aa10.03□□□□□ -0.8
COL9A2-207ENST00000482722 SS18Q15532 418 aa10.03□□□□□ -0.8
COL9A2-207ENST00000482722 C11orf68Q9H3H3 251 aaKnown RBP10.02□□□□□ -0.8
COL9A2-207ENST00000482722 TRGV2A0A075B6R0 118 aa10.02□□□□□ -0.81
COL9A2-207ENST00000482722 STAB1Q9NY15 2570 aa10.01□□□□□ -0.81
COL9A2-207ENST00000482722 PAX4O43316 350 aa10□□□□□ -0.81
COL9A2-207ENST00000482722 LY6G6DO95868 133 aa10□□□□□ -0.81
COL9A2-207ENST00000482722 GHRHP01286 108 aa10□□□□□ -0.81
COL9A2-207ENST00000482722 CCKP06307 115 aa10□□□□□ -0.81
COL9A2-207ENST00000482722 TRAV23DV6A0A075B6W5 121 aa10□□□□□ -0.81
COL9A2-207ENST00000482722 TMEM243Q9BU79 118 aa10□□□□□ -0.81
COL9A2-207ENST00000482722 ORMDL1Q9P0S3 153 aa10□□□□□ -0.81
COL9A2-207ENST00000482722 PKD1L1Q8TDX9 2849 aa9.99□□□□□ -0.81
COL9A2-207ENST00000482722 INAFM1C9JVW0 142 aa9.98□□□□□ -0.81
COL9A2-207ENST00000482722 FAM19A1Q7Z5A9 133 aa9.98□□□□□ -0.81
COL9A2-207ENST00000482722 IGLV4-60A0A075B6I1 120 aa9.98□□□□□ -0.81
COL9A2-207ENST00000482722 TRBV10-1A0A0K0K1A3 114 aa9.98□□□□□ -0.81
COL9A2-207ENST00000482722 SPATA3Q8NHX4 192 aa9.97□□□□□ -0.81
COL9A2-207ENST00000482722 ENHOQ6UWT2 76 aa9.96□□□□□ -0.81
COL9A2-207ENST00000482722 IL17DQ8TAD2 202 aa9.96□□□□□ -0.81
COL9A2-207ENST00000482722 TRGV4A0A0C4DH28 118 aa9.96□□□□□ -0.82
COL9A2-207ENST00000482722 IBA57-AS1B1ANH7 110 aa9.96□□□□□ -0.82
COL9A2-207ENST00000482722 KRTAP10-3P60369 221 aa9.96□□□□□ -0.82
COL9A2-207ENST00000482722 TRBV6-4A0A1B0GX49 114 aa9.95□□□□□ -0.82
COL9A2-207ENST00000482722 C20orf197Q8N268 126 aa9.95□□□□□ -0.82
COL9A2-207ENST00000482722 TMEM86BQ8N661 226 aa9.95□□□□□ -0.82
COL9A2-207ENST00000482722 MAST4O15021 2626 aa9.95□□□□□ -0.82
COL9A2-207ENST00000482722 GIG44P09565 113 aaPredicted RBP9.94□□□□□ -0.82
COL9A2-207ENST00000482722 NDUFC2O95298 119 aa9.94□□□□□ -0.82
COL9A2-207ENST00000482722 S100A7L2Q5SY68 101 aa9.94□□□□□ -0.82
COL9A2-207ENST00000482722 IGHV3OR16-9A0A0B4J2B5 98 aa9.93□□□□□ -0.82
COL9A2-207ENST00000482722 RNASE1P07998 156 aaKnown RBP9.93□□□□□ -0.82
COL9A2-207ENST00000482722 FBN1P35555 2871 aaKnown RBP9.93□□□□□ -0.82
COL9A2-207ENST00000482722 PRR3P79522 188 aaKnown RBP9.93□□□□□ -0.82
COL9A2-207ENST00000482722 NDUFC2-KCTD14E9PQ53 114 aa9.92□□□□□ -0.82
COL9A2-207ENST00000482722 ATP5EP2Q5VTU8 51 aa9.92□□□□□ -0.82
COL9A2-207ENST00000482722 DEFB130BP0DP73 79 aa9.92□□□□□ -0.82
COL9A2-207ENST00000482722 DEFB130AP0DP74 79 aa9.92□□□□□ -0.82
COL9A2-207ENST00000482722 JMJD7-PLA2G4BH0Y9G9 81 aa9.91□□□□□ -0.82
COL9A2-207ENST00000482722 PLAC8L1A1L4L8 177 aa9.91□□□□□ -0.82
COL9A2-207ENST00000482722 XCL1P47992 114 aa9.91□□□□□ -0.82
COL9A2-207ENST00000482722 CLPSL2Q6UWE3 100 aa9.91□□□□□ -0.82
COL9A2-207ENST00000482722 C16orf74Q96GX8 76 aa9.91□□□□□ -0.82
COL9A2-207ENST00000482722 LINC00167Q96N53 147 aa9.91□□□□□ -0.82
COL9A2-207ENST00000482722 LYPD5Q6UWN5 251 aa9.9□□□□□ -0.82
COL9A2-207ENST00000482722 A0A087WZ39 114 aa9.9□□□□□ -0.82
COL9A2-207ENST00000482722 FAM236DA0A1B0GTK5 79 aa9.9□□□□□ -0.82
COL9A2-207ENST00000482722 FAM236CP0DP71 79 aa9.9□□□□□ -0.82
COL9A2-207ENST00000482722 Q8N814 137 aa9.9□□□□□ -0.82
COL9A2-207ENST00000482722 NOTCH1P46531 2555 aa9.89□□□□□ -0.83
COL9A2-207ENST00000482722 C6orf226Q5I0X4 101 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms