RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 VMO1Q7Z5L0 202 aa4.34□□□□□ -1.71
LSM5-210ENST00000480956 DMXL2Q8TDJ6 3036 aa4.33□□□□□ -1.72
LSM5-210ENST00000480956 IGF2RP11717 2491 aa4.33□□□□□ -1.72
LSM5-210ENST00000480956 EXPH5Q8NEV8 1989 aa4.33□□□□□ -1.72
LSM5-210ENST00000480956 PMCHL1Q16048 86 aa4.33□□□□□ -1.72
LSM5-210ENST00000480956 TVP23CQ96ET8 276 aa4.33□□□□□ -1.72
LSM5-210ENST00000480956 TRGV4A0A0C4DH28 118 aa4.32□□□□□ -1.72
LSM5-210ENST00000480956 HIGD1CA8MV81 97 aa4.32□□□□□ -1.72
LSM5-210ENST00000480956 HMGN4O00479 90 aa4.32□□□□□ -1.72
LSM5-210ENST00000480956 IGLV3-1P01715 115 aa4.32□□□□□ -1.72
LSM5-210ENST00000480956 COX6CP09669 75 aa4.32□□□□□ -1.72
LSM5-210ENST00000480956 SMIM11AP58511 58 aa4.32□□□□□ -1.72
LSM5-210ENST00000480956 BPESC1Q9GZL8 116 aa4.32□□□□□ -1.72
LSM5-210ENST00000480956 MGAQ8IWI9 3026 aa4.32□□□□□ -1.72
LSM5-210ENST00000480956 CHD8Q9HCK8 2581 aa4.32□□□□□ -1.72
LSM5-210ENST00000480956 SFTA2Q6UW10 78 aa4.32□□□□□ -1.72
LSM5-210ENST00000480956 DOCK10Q96BY6 2186 aa4.32□□□□□ -1.72
LSM5-210ENST00000480956 ATMQ13315 3056 aa4.32□□□□□ -1.72
LSM5-210ENST00000480956 CNTRLQ7Z7A1 2325 aa4.31□□□□□ -1.72
LSM5-210ENST00000480956 NCOR2Q9Y618 2525 aa4.31□□□□□ -1.72
LSM5-210ENST00000480956 RNASE3P12724 160 aaKnown RBP4.31□□□□□ -1.72
LSM5-210ENST00000480956 KLKP1Q107X0 134 aa4.31□□□□□ -1.72
LSM5-210ENST00000480956 LCE1FQ5T754 118 aa4.31□□□□□ -1.72
LSM5-210ENST00000480956 C20orf197Q8N268 126 aa4.31□□□□□ -1.72
LSM5-210ENST00000480956 WFDC6Q9BQY6 131 aa4.31□□□□□ -1.72
LSM5-210ENST00000480956 H3BUT2 72 aa4.3□□□□□ -1.72
LSM5-210ENST00000480956 ZZEF1O43149 2961 aa4.3□□□□□ -1.72
LSM5-210ENST00000480956 BCE1O60756 84 aa4.3□□□□□ -1.72
LSM5-210ENST00000480956 ZNF56Q15929 161 aa4.3□□□□□ -1.72
LSM5-210ENST00000480956 WFDC10AQ9H1F0 79 aa4.3□□□□□ -1.72
LSM5-210ENST00000480956 DYNLRB1Q9NP97 96 aa4.3□□□□□ -1.72
LSM5-210ENST00000480956 ANKRD11Q6UB99 2663 aaPredicted RBP4.3□□□□□ -1.72
LSM5-210ENST00000480956 PRRC2CQ9Y520 2896 aaKnown RBP4.3□□□□□ -1.72
LSM5-210ENST00000480956 APC2O95996 2303 aa4.3□□□□□ -1.72
LSM5-210ENST00000480956 PIEZO1Q92508 2521 aa4.3□□□□□ -1.72
LSM5-210ENST00000480956 SNRPGP62308 76 aaKnown RBP4.29□□□□□ -1.72
LSM5-210ENST00000480956 SSBP1Q04837 148 aaKnown RBP4.29□□□□□ -1.72
LSM5-210ENST00000480956 TTTY12Q9BZ98 90 aa4.29□□□□□ -1.72
LSM5-210ENST00000480956 MED12Q93074 2177 aa4.29□□□□□ -1.72
LSM5-210ENST00000480956 DSPP15924 2871 aaKnown RBP4.29□□□□□ -1.72
LSM5-210ENST00000480956 CLPSL1A2RUU4 121 aa4.29□□□□□ -1.72
LSM5-210ENST00000480956 CPSF4LA6NMK7 179 aaKnown RBP4.29□□□□□ -1.72
LSM5-210ENST00000480956 ELOF1P60002 83 aaKnown RBP4.29□□□□□ -1.72
LSM5-210ENST00000480956 PRO0461Q9UI25 63 aa4.29□□□□□ -1.72
LSM5-210ENST00000480956 ACACAQ13085 2346 aa4.28□□□□□ -1.72
LSM5-210ENST00000480956 BSNQ9UPA5 3926 aa4.28□□□□□ -1.72
LSM5-210ENST00000480956 F2Z2F3 143 aa4.28□□□□□ -1.72
LSM5-210ENST00000480956 PIEZO2Q9H5I5 2752 aa4.28□□□□□ -1.72
LSM5-210ENST00000480956 ESPL1Q14674 2120 aa4.28□□□□□ -1.73
LSM5-210ENST00000480956 DEFB109BQ30KR1 87 aa4.27□□□□□ -1.73
LSM5-210ENST00000480956 IGFL1Q6UW32 110 aa4.27□□□□□ -1.73
LSM5-210ENST00000480956 FAM223AQ8IWN6 122 aa4.27□□□□□ -1.73
LSM5-210ENST00000480956 NBEAQ8NFP9 2946 aa4.27□□□□□ -1.73
LSM5-210ENST00000480956 CDC42SE2Q9NRR3 84 aa4.27□□□□□ -1.73
LSM5-210ENST00000480956 URB1O60287 2271 aaKnown RBP4.27□□□□□ -1.73
LSM5-210ENST00000480956 CACNA1GO43497 2377 aa4.27□□□□□ -1.73
LSM5-210ENST00000480956 TRBV6-7A0A0A0MS04 114 aa4.26□□□□□ -1.73
LSM5-210ENST00000480956 TMEM14DPA8MWL7 114 aa4.26□□□□□ -1.73
LSM5-210ENST00000480956 NDUFA4L2Q9NRX3 87 aa4.26□□□□□ -1.73
LSM5-210ENST00000480956 SMG1Q96Q15 3661 aaKnown RBP4.26□□□□□ -1.73
LSM5-210ENST00000480956 PRRC2AP48634 2157 aaKnown RBP4.26□□□□□ -1.73
LSM5-210ENST00000480956 TRBV25-1A0A075B6N4 114 aa4.26□□□□□ -1.73
LSM5-210ENST00000480956 DNAL4O96015 105 aa4.26□□□□□ -1.73
LSM5-210ENST00000480956 ACYP1P07311 99 aa4.26□□□□□ -1.73
LSM5-210ENST00000480956 SPATA45Q537H7 98 aa4.26□□□□□ -1.73
LSM5-210ENST00000480956 CYYR1Q96J86 154 aa4.26□□□□□ -1.73
LSM5-210ENST00000480956 LINC01600Q96MT4 127 aa4.26□□□□□ -1.73
LSM5-210ENST00000480956 LENEPQ9Y5L5 61 aa4.26□□□□□ -1.73
LSM5-210ENST00000480956 ITPR1Q14643 2758 aa4.26□□□□□ -1.73
LSM5-210ENST00000480956 ZNF563Q8TA94 476 aa4.25□□□□□ -1.73
LSM5-210ENST00000480956 TXNDC17Q9BRA2 123 aa4.25□□□□□ -1.73
LSM5-210ENST00000480956 CR1P17927 2039 aa4.25□□□□□ -1.73
LSM5-210ENST00000480956 CACNA1AO00555 2505 aa4.25□□□□□ -1.73
LSM5-210ENST00000480956 FDCSPQ8NFU4 85 aa4.24□□□□□ -1.73
LSM5-210ENST00000480956 TMEM14CQ9P0S9 112 aa4.24□□□□□ -1.73
LSM5-210ENST00000480956 PTPRQQ9UMZ3 2332 aa4.24□□□□□ -1.73
LSM5-210ENST00000480956 RTTNQ86VV8 2226 aa4.24□□□□□ -1.73
LSM5-210ENST00000480956 MAP1BP46821 2468 aaKnown RBP4.24□□□□□ -1.73
LSM5-210ENST00000480956 IGLV3-32A0A0A0MS00 114 aa4.24□□□□□ -1.73
LSM5-210ENST00000480956 LOC101927531A0A1B0GV80 90 aa4.24□□□□□ -1.73
LSM5-210ENST00000480956 A0A1B0GWA3 101 aa4.24□□□□□ -1.73
LSM5-210ENST00000480956 PPP1R17O96001 155 aa4.24□□□□□ -1.73
LSM5-210ENST00000480956 EFNA4P52798 201 aa4.24□□□□□ -1.73
LSM5-210ENST00000480956 CAV3P56539 151 aa4.24□□□□□ -1.73
LSM5-210ENST00000480956 C18orf32Q8TCD1 76 aa4.24□□□□□ -1.73
LSM5-210ENST00000480956 ARFGEF3Q5TH69 2177 aa4.23□□□□□ -1.73
LSM5-210ENST00000480956 RELNP78509 3460 aa4.23□□□□□ -1.73
LSM5-210ENST00000480956 HMGN3Q15651 99 aa4.23□□□□□ -1.73
LSM5-210ENST00000480956 COA5Q86WW8 74 aa4.23□□□□□ -1.73
LSM5-210ENST00000480956 IFI6P09912 130 aa4.22□□□□□ -1.73
LSM5-210ENST00000480956 CCL3L1P16619 93 aa4.22□□□□□ -1.73
LSM5-210ENST00000480956 KRTAP10-6P60371 365 aaPredicted RBP4.22□□□□□ -1.73
LSM5-210ENST00000480956 HEPN1Q6WQI6 88 aa4.22□□□□□ -1.73
LSM5-210ENST00000480956 LINC00643Q86TS7 51 aa4.22□□□□□ -1.73
LSM5-210ENST00000480956 COX7B2Q8TF08 81 aa4.22□□□□□ -1.73
LSM5-210ENST00000480956 PROK2Q9HC23 129 aa4.22□□□□□ -1.73
LSM5-210ENST00000480956 DNAJC13O75165 2243 aa4.22□□□□□ -1.73
LSM5-210ENST00000480956 SPAG11BQ08648 103 aa4.21□□□□□ -1.73
LSM5-210ENST00000480956 CFAP126Q5VTH2 177 aa4.21□□□□□ -1.73
LSM5-210ENST00000480956 SPAG11AQ6PDA7 123 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms