RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 PTPRDP23468 1912 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 ANK1P16157 1881 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 A0A087WTM6 91 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 K7ERU9 68 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 FXYD1O00168 92 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 COX4I1P13073 169 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 COX6B1P14854 86 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 ZNF137PP52743 207 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 ARPC4P59998 168 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 ELOF1P60002 83 aaKnown RBP0.23□□□□□ -2.37
CALD1-219ENST00000480638 RPL37P61927 97 aaKnown RBP0.23□□□□□ -2.37
CALD1-219ENST00000480638 KLKP1Q107X0 134 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 Q6ZUT4 128 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 SMIM5Q71RC9 77 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 TSKUQ8WUA8 353 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 FAM107BQ9H098 131 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 TPT1P8Q9HAU6 139 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 ERG28Q9UKR5 140 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 DDX60LQ5H9U9 1706 aaKnown RBP0.23□□□□□ -2.37
CALD1-219ENST00000480638 KIAA1551Q9HCM1 1747 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 CFAP74Q9C0B2 1584 aa0.23□□□□□ -2.37
CALD1-219ENST00000480638 TOP2AP11388 1531 aaKnown RBP0.23□□□□□ -2.37
CALD1-219ENST00000480638 PLXNA1Q9UIW2 1896 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 MYO5CQ9NQX4 1742 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 A0A096LNT2 108 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 TRAV2A0A0B4J234 112 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 TEX49A0A1B0GTD5 131 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 LOC730098B7Z3J9 87 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 J3QR89 54 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 YPEL1O60688 119 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 NCR2O95944 276 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 PIRTP0C851 137 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 PYYP10082 97 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 S100A12P80511 92 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 EMX2Q04743 252 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 VSTM2AQ8TAG5 236 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 SPRR2FQ96RM1 72 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 TMEM14BQ9NUH8 114 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 PLXNC1O60486 1568 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 HELZP42694 1942 aaKnown RBP0.22□□□□□ -2.37
CALD1-219ENST00000480638 TRPM2O94759 1503 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 ARHGAP5Q13017 1502 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 PHIPQ8WWQ0 1821 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 NCOA2Q15596 1464 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 KDM3BQ7LBC6 1761 aa0.22□□□□□ -2.37
CALD1-219ENST00000480638 DDX60Q8IY21 1712 aaKnown RBP0.21□□□□□ -2.38
CALD1-219ENST00000480638 TRAV12-3A0A0B4J271 114 aa0.21□□□□□ -2.38
CALD1-219ENST00000480638 TCRBV3S1A0A5B6 114 aa0.21□□□□□ -2.38
CALD1-219ENST00000480638 CLPSL1A2RUU4 121 aa0.21□□□□□ -2.38
CALD1-219ENST00000480638 HMGN1P05114 100 aa0.21□□□□□ -2.38
CALD1-219ENST00000480638 COPZ1P61923 177 aa0.21□□□□□ -2.38
CALD1-219ENST00000480638 RRAS2P62070 204 aaPredicted RBP0.21□□□□□ -2.38
CALD1-219ENST00000480638 C10orf82Q8WW14 230 aa0.21□□□□□ -2.38
CALD1-219ENST00000480638 TCEAL4Q96EI5 215 aa0.21□□□□□ -2.38
CALD1-219ENST00000480638 DPH3Q96FX2 82 aa0.21□□□□□ -2.38
CALD1-219ENST00000480638 TMEM141Q96I45 108 aa0.21□□□□□ -2.38
CALD1-219ENST00000480638 PFDN5Q99471 154 aa0.21□□□□□ -2.38
CALD1-219ENST00000480638 SAR1AQ9NR31 198 aa0.21□□□□□ -2.38
CALD1-219ENST00000480638 ABCA10Q8WWZ4 1543 aa0.21□□□□□ -2.38
CALD1-219ENST00000480638 ZNF518AQ6AHZ1 1483 aa0.21□□□□□ -2.38
CALD1-219ENST00000480638 C4AP0C0L4 1744 aa0.21□□□□□ -2.38
CALD1-219ENST00000480638 IFT172Q9UG01 1749 aa0.21□□□□□ -2.38
CALD1-219ENST00000480638 UBR3Q6ZT12 1888 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 DUOX1Q9NRD9 1551 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 CCDC179H3BU77 68 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 GNG7O60262 68 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 CCL3L1P16619 93 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 UBE2G1P62253 170 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 SPINK13Q1W4C9 94 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 CCDC58Q4VC31 144 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 SPANXN1Q5VSR9 72 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 SLC48A1Q6P1K1 146 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 CYP2G1PQ6ZSU1 146 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 NDUFA11Q86Y39 141 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 C20orf197Q8N268 126 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 Q96NJ1 140 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 VPS25Q9BRG1 176 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 LINC00470Q9BZP3 86 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 CDC42BPAQ5VT25 1732 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 MYH1P12882 1939 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 SPTBP11277 2137 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 CASKIN1Q8WXD9 1431 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 SBF2Q86WG5 1849 aa0.2□□□□□ -2.38
CALD1-219ENST00000480638 IBTKQ9P2D0 1353 aaPredicted RBP0.19□□□□□ -2.38
CALD1-219ENST00000480638 TMEM2Q9UHN6 1383 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 PRDM2Q13029 1718 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 FAM208AQ9UK61 1670 aaKnown RBP0.19□□□□□ -2.38
CALD1-219ENST00000480638 TRAV12-2A0A075B6T6 113 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 LOC100130705A0A1B0GUX0 176 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 K7EP13 123 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 APOC1P02654 83 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 IL5P05113 134 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 HIST1H1DP16402 221 aaKnown RBP0.19□□□□□ -2.38
CALD1-219ENST00000480638 UBE2D1P51668 147 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 SPINK7P58062 85 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 C9orf116Q5BN46 136 aaPredicted RBP0.19□□□□□ -2.38
CALD1-219ENST00000480638 S100A7L2Q5SY68 101 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 SCIMPQ6UWF3 145 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 LSM10Q969L4 123 aaKnown RBP0.19□□□□□ -2.38
CALD1-219ENST00000480638 PSMG3Q9BT73 122 aaPredicted RBP0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms