RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 PRSS47A8MTI9 375 aa6.62□□□□□ -1.35
TTC28-206ENST00000480563 CRYGAP11844 174 aa6.62□□□□□ -1.35
TTC28-206ENST00000480563 IFI27P40305 119 aaPredicted RBP6.62□□□□□ -1.35
TTC28-206ENST00000480563 KIAA1644Q3SXP7 199 aa6.62□□□□□ -1.35
TTC28-206ENST00000480563 C9orf129Q5T035 196 aaKnown RBP6.62□□□□□ -1.35
TTC28-206ENST00000480563 RETNLBQ9BQ08 111 aa6.62□□□□□ -1.35
TTC28-206ENST00000480563 NDUFC2-KCTD14E9PQ53 114 aa6.61□□□□□ -1.35
TTC28-206ENST00000480563 KIAA0087Q14695 138 aa6.61□□□□□ -1.35
TTC28-206ENST00000480563 FAM104AQ969W3 186 aa6.61□□□□□ -1.35
TTC28-206ENST00000480563 CYSLTR1Q9Y271 337 aa6.61□□□□□ -1.35
TTC28-206ENST00000480563 TRBV30A0A0K0K1B3 111 aa6.6□□□□□ -1.35
TTC28-206ENST00000480563 NUPR1O60356 82 aa6.6□□□□□ -1.35
TTC28-206ENST00000480563 RPL39P62891 51 aaKnown RBP6.6□□□□□ -1.35
TTC28-206ENST00000480563 Q6ZN92 141 aa6.6□□□□□ -1.35
TTC28-206ENST00000480563 FA2HQ7L5A8 372 aa6.6□□□□□ -1.35
TTC28-206ENST00000480563 CBLN2Q8IUK8 224 aa6.6□□□□□ -1.35
TTC28-206ENST00000480563 ALKBH7Q9BT30 221 aaPredicted RBP6.6□□□□□ -1.35
TTC28-206ENST00000480563 MUC17Q685J3 4493 aa6.59□□□□□ -1.35
TTC28-206ENST00000480563 LINC01549A6NIU2 74 aa6.59□□□□□ -1.35
TTC28-206ENST00000480563 TPRXLQ17RH7 258 aa6.59□□□□□ -1.35
TTC28-206ENST00000480563 LCE2DQ5TA82 110 aaPredicted RBP6.59□□□□□ -1.35
TTC28-206ENST00000480563 C2orf82Q6UX34 121 aa6.59□□□□□ -1.35
TTC28-206ENST00000480563 PACRGQ96M98 296 aaPredicted RBP6.59□□□□□ -1.35
TTC28-206ENST00000480563 C22orf24Q9Y442 160 aa6.59□□□□□ -1.35
TTC28-206ENST00000480563 IFITM10A6NMD0 228 aa6.58□□□□□ -1.36
TTC28-206ENST00000480563 RPL28P46779 137 aaKnown RBP6.58□□□□□ -1.36
TTC28-206ENST00000480563 RAB5BP61020 215 aa6.58□□□□□ -1.36
TTC28-206ENST00000480563 LBHQ53QV2 105 aaPredicted RBP6.58□□□□□ -1.36
TTC28-206ENST00000480563 PAPPA-AS1Q5QFB9 102 aa6.58□□□□□ -1.36
TTC28-206ENST00000480563 C2orf66Q6UXQ4 117 aa6.58□□□□□ -1.36
TTC28-206ENST00000480563 C2orf88Q9BSF0 95 aa6.58□□□□□ -1.36
TTC28-206ENST00000480563 IGLV7-46A0A075B6I9 117 aa6.57□□□□□ -1.36
TTC28-206ENST00000480563 NPSP0C0P6 89 aa6.57□□□□□ -1.36
TTC28-206ENST00000480563 MRPS36P82909 103 aaKnown RBP6.57□□□□□ -1.36
TTC28-206ENST00000480563 ANAPC11Q9NYG5 84 aa6.57□□□□□ -1.36
TTC28-206ENST00000480563 CRCT1Q9UGL9 99 aa6.57□□□□□ -1.36
TTC28-206ENST00000480563 PYGO1Q9Y3Y4 419 aa6.57□□□□□ -1.36
TTC28-206ENST00000480563 BCE1O60756 84 aa6.56□□□□□ -1.36
TTC28-206ENST00000480563 KRTAP13-2Q52LG2 175 aa6.56□□□□□ -1.36
TTC28-206ENST00000480563 TEX43Q6ZNM6 134 aa6.56□□□□□ -1.36
TTC28-206ENST00000480563 LINC00469Q8N7U9 141 aa6.56□□□□□ -1.36
TTC28-206ENST00000480563 TMEM141Q96I45 108 aa6.56□□□□□ -1.36
TTC28-206ENST00000480563 YPEL4Q96NS1 127 aa6.56□□□□□ -1.36
TTC28-206ENST00000480563 LINC00242Q5T6M2 205 aa6.55□□□□□ -1.36
TTC28-206ENST00000480563 LINC00173Q6ZV60 143 aa6.55□□□□□ -1.36
TTC28-206ENST00000480563 LINC00304Q8N9R0 145 aa6.55□□□□□ -1.36
TTC28-206ENST00000480563 IGLV4-3A0A075B6K6 122 aa6.54□□□□□ -1.36
TTC28-206ENST00000480563 C18orf32Q8TCD1 76 aa6.54□□□□□ -1.36
TTC28-206ENST00000480563 TOMM6Q96B49 74 aa6.54□□□□□ -1.36
TTC28-206ENST00000480563 TIMM17AQ99595 171 aa6.54□□□□□ -1.36
TTC28-206ENST00000480563 VCX2Q9H322 139 aa6.54□□□□□ -1.36
TTC28-206ENST00000480563 XAGE1AQ9HD64 81 aa6.54□□□□□ -1.36
TTC28-206ENST00000480563 LINC01546A6NGU7 62 aa6.53□□□□□ -1.36
TTC28-206ENST00000480563 LINC01547P58512 204 aaPredicted RBP6.53□□□□□ -1.36
TTC28-206ENST00000480563 MRPL55Q7Z7F7 128 aaKnown RBP6.53□□□□□ -1.36
TTC28-206ENST00000480563 SCGB3A1Q96QR1 104 aa6.53□□□□□ -1.36
TTC28-206ENST00000480563 HBDP02042 147 aa6.52□□□□□ -1.37
TTC28-206ENST00000480563 PRSS2P07478 247 aa6.52□□□□□ -1.37
TTC28-206ENST00000480563 LINC00614P0C842 121 aa6.52□□□□□ -1.37
TTC28-206ENST00000480563 S100A1P23297 94 aa6.52□□□□□ -1.37
TTC28-206ENST00000480563 SEC11AP67812 179 aa6.52□□□□□ -1.37
TTC28-206ENST00000480563 ERASQ7Z444 233 aa6.52□□□□□ -1.37
TTC28-206ENST00000480563 BAGE3Q86Y29 109 aa6.52□□□□□ -1.37
TTC28-206ENST00000480563 LINC01561Q8N1V8 128 aa6.52□□□□□ -1.37
TTC28-206ENST00000480563 PPDPFQ9H3Y8 114 aa6.52□□□□□ -1.37
TTC28-206ENST00000480563 TP73-AS1Q9UF72 201 aa6.52□□□□□ -1.37
TTC28-206ENST00000480563 TRGC2P03986 189 aa6.51□□□□□ -1.37
TTC28-206ENST00000480563 CKS1BP61024 79 aa6.51□□□□□ -1.37
TTC28-206ENST00000480563 FAM229BQ4G0N7 80 aa6.51□□□□□ -1.37
TTC28-206ENST00000480563 CHCHD1Q96BP2 118 aaKnown RBP6.51□□□□□ -1.37
TTC28-206ENST00000480563 TOMM7Q9P0U1 55 aa6.51□□□□□ -1.37
TTC28-206ENST00000480563 IGIPA6NJ69 53 aa6.5□□□□□ -1.37
TTC28-206ENST00000480563 RPL37AP8A6NKH3 93 aa6.5□□□□□ -1.37
TTC28-206ENST00000480563 HSBP1O75506 76 aa6.5□□□□□ -1.37
TTC28-206ENST00000480563 C6orf226Q5I0X4 101 aa6.5□□□□□ -1.37
TTC28-206ENST00000480563 LINC00167Q96N53 147 aa6.5□□□□□ -1.37
TTC28-206ENST00000480563 IGKV2D-26A0A0A0MRZ7 120 aa6.49□□□□□ -1.37
TTC28-206ENST00000480563 COLCA2A8K830 154 aa6.49□□□□□ -1.37
TTC28-206ENST00000480563 ATP5LO75964 103 aa6.49□□□□□ -1.37
TTC28-206ENST00000480563 CTAG1AP78358 180 aa6.49□□□□□ -1.37
TTC28-206ENST00000480563 AMELXQ99217 191 aa6.49□□□□□ -1.37
TTC28-206ENST00000480563 GEMIN7Q9H840 131 aaKnown RBP6.49□□□□□ -1.37
TTC28-206ENST00000480563 GAGE10A6NGK3 116 aa6.48□□□□□ -1.37
TTC28-206ENST00000480563 SCO1O75880 301 aa6.48□□□□□ -1.37
TTC28-206ENST00000480563 UBE2AP49459 152 aa6.48□□□□□ -1.37
TTC28-206ENST00000480563 HERVK_113P63121 156 aa6.48□□□□□ -1.37
TTC28-206ENST00000480563 KRTAP13-1Q8IUC0 172 aa6.48□□□□□ -1.37
TTC28-206ENST00000480563 ATP6V1G1O75348 118 aa6.47□□□□□ -1.37
TTC28-206ENST00000480563 PMVKQ15126 192 aa6.47□□□□□ -1.37
TTC28-206ENST00000480563 Q8IZM0 81 aa6.47□□□□□ -1.37
TTC28-206ENST00000480563 NDUFA6P56556 154 aa6.46□□□□□ -1.38
TTC28-206ENST00000480563 PMCHL1Q16048 86 aa6.46□□□□□ -1.38
TTC28-206ENST00000480563 ZC2HC1BQ5TFG8 222 aa6.46□□□□□ -1.38
TTC28-206ENST00000480563 LINC00337Q8N6G1 96 aa6.46□□□□□ -1.38
TTC28-206ENST00000480563 URB1-AS1Q96HZ7 61 aa6.46□□□□□ -1.38
TTC28-206ENST00000480563 F8VRH5 84 aa6.45□□□□□ -1.38
TTC28-206ENST00000480563 H3BRM9 83 aa6.45□□□□□ -1.38
TTC28-206ENST00000480563 ASB16-AS1Q495Z4 193 aa6.45□□□□□ -1.38
TTC28-206ENST00000480563 PDZD11Q5EBL8 140 aa6.45□□□□□ -1.38
TTC28-206ENST00000480563 FAM19A3Q7Z5A8 133 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms