RNA–Protein interactions for RNA: ENST00000479896.1

PTPRE-208, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 5,736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-208ENST00000479896 C10orf142B7Z368 130 aa8.77□□□□□ -1.01
PTPRE-208ENST00000479896 C22orf24Q9Y442 160 aa8.77□□□□□ -1.01
PTPRE-208ENST00000479896 ACACBO00763 2458 aa8.77□□□□□ -1.01
PTPRE-208ENST00000479896 SBSPONQ8IVN8 264 aa8.76□□□□□ -1.01
PTPRE-208ENST00000479896 SMCR5Q8TEV8 140 aa8.76□□□□□ -1.01
PTPRE-208ENST00000479896 CUL9Q8IWT3 2517 aa8.76□□□□□ -1.01
PTPRE-208ENST00000479896 Q6Q795 121 aa8.76□□□□□ -1.01
PTPRE-208ENST00000479896 KIAA1549Q9HCM3 1950 aa8.75□□□□□ -1.01
PTPRE-208ENST00000479896 HCG22E2RYF7 251 aa8.75□□□□□ -1.01
PTPRE-208ENST00000479896 COX8CQ7Z4L0 72 aa8.74□□□□□ -1.01
PTPRE-208ENST00000479896 TSPEAR-AS2P59090 65 aa8.74□□□□□ -1.01
PTPRE-208ENST00000479896 NOTCH2Q04721 2471 aa8.74□□□□□ -1.01
PTPRE-208ENST00000479896 SMIM26A0A096LP01 95 aa8.73□□□□□ -1.01
PTPRE-208ENST00000479896 DEFB116Q30KQ4 102 aa8.73□□□□□ -1.01
PTPRE-208ENST00000479896 ADAMTSL4-AS1Q5T5F5 129 aa8.73□□□□□ -1.01
PTPRE-208ENST00000479896 TRBV7-7A0A0K0K1E9 115 aa8.73□□□□□ -1.01
PTPRE-208ENST00000479896 XGP55808 180 aa8.72□□□□□ -1.01
PTPRE-208ENST00000479896 PCNX3Q9H6A9 2034 aa8.71□□□□□ -1.01
PTPRE-208ENST00000479896 CCDC179H3BU77 68 aa8.71□□□□□ -1.01
PTPRE-208ENST00000479896 Q8N3U1 123 aa8.71□□□□□ -1.02
PTPRE-208ENST00000479896 COL5A1P20908 1838 aaPredicted RBP8.71□□□□□ -1.02
PTPRE-208ENST00000479896 SPACA4Q8TDM5 124 aa8.71□□□□□ -1.02
PTPRE-208ENST00000479896 IGKV2D-30A0A075B6S6 120 aa8.7□□□□□ -1.02
PTPRE-208ENST00000479896 IGKV2-30P06310 120 aa8.7□□□□□ -1.02
PTPRE-208ENST00000479896 PCDH15Q96QU1 1955 aa8.7□□□□□ -1.02
PTPRE-208ENST00000479896 BDP1A6H8Y1 2624 aa8.7□□□□□ -1.02
PTPRE-208ENST00000479896 C7orf65Q6ZTY9 151 aa8.69□□□□□ -1.02
PTPRE-208ENST00000479896 LRP4O75096 1905 aa8.69□□□□□ -1.02
PTPRE-208ENST00000479896 CSPG4Q6UVK1 2322 aa8.68□□□□□ -1.02
PTPRE-208ENST00000479896 A0A087WVE0 104 aa8.68□□□□□ -1.02
PTPRE-208ENST00000479896 PTPN13Q12923 2485 aa8.68□□□□□ -1.02
PTPRE-208ENST00000479896 hDV103S1A0JD37 113 aa8.67□□□□□ -1.02
PTPRE-208ENST00000479896 URB1-AS1Q96HZ7 61 aa8.67□□□□□ -1.02
PTPRE-208ENST00000479896 PRRC2AP48634 2157 aaKnown RBP8.67□□□□□ -1.02
PTPRE-208ENST00000479896 PRR14LQ5THK1 2151 aa8.67□□□□□ -1.02
PTPRE-208ENST00000479896 H3BNG1 76 aa8.67□□□□□ -1.02
PTPRE-208ENST00000479896 MOBPQ13875 183 aa8.67□□□□□ -1.02
PTPRE-208ENST00000479896 RAI1Q7Z5J4 1906 aaPredicted RBP8.67□□□□□ -1.02
PTPRE-208ENST00000479896 KIF25-AS1Q9Y6Z4 181 aa8.66□□□□□ -1.02
PTPRE-208ENST00000479896 SPG11Q96JI7 2443 aa8.66□□□□□ -1.02
PTPRE-208ENST00000479896 C16orf90A8MZG2 172 aa8.66□□□□□ -1.02
PTPRE-208ENST00000479896 RTL8CO15255 209 aa8.66□□□□□ -1.02
PTPRE-208ENST00000479896 C11orf72Q8NBR9 251 aa8.66□□□□□ -1.02
PTPRE-208ENST00000479896 SORL1Q92673 2214 aa8.66□□□□□ -1.02
PTPRE-208ENST00000479896 A8MTW9 85 aa8.65□□□□□ -1.02
PTPRE-208ENST00000479896 SOSTDC1Q6X4U4 206 aa8.65□□□□□ -1.03
PTPRE-208ENST00000479896 C1orf195Q5TG92 126 aa8.65□□□□□ -1.03
PTPRE-208ENST00000479896 KRTAP24-1Q3LI83 254 aa8.64□□□□□ -1.03
PTPRE-208ENST00000479896 C1orf64Q8NEQ6 169 aa8.64□□□□□ -1.03
PTPRE-208ENST00000479896 KIAA0087Q14695 138 aa8.64□□□□□ -1.03
PTPRE-208ENST00000479896 LINC00167Q96N53 147 aa8.64□□□□□ -1.03
PTPRE-208ENST00000479896 WNK1Q9H4A3 2382 aa8.64□□□□□ -1.03
PTPRE-208ENST00000479896 HIVEP3Q5T1R4 2406 aa8.64□□□□□ -1.03
PTPRE-208ENST00000479896 CRYGAP11844 174 aa8.63□□□□□ -1.03
PTPRE-208ENST00000479896 TTC28Q96AY4 2481 aa8.63□□□□□ -1.03
PTPRE-208ENST00000479896 Q6ZRP5 223 aa8.63□□□□□ -1.03
PTPRE-208ENST00000479896 PLA2G1BP04054 148 aaKnown RBP8.63□□□□□ -1.03
PTPRE-208ENST00000479896 NBDYA0A0U1RRE5 68 aa8.63□□□□□ -1.03
PTPRE-208ENST00000479896 J3QL48 77 aa8.63□□□□□ -1.03
PTPRE-208ENST00000479896 TP53AIP1Q9HCN2 124 aa8.62□□□□□ -1.03
PTPRE-208ENST00000479896 LINC00315P59091 139 aa8.62□□□□□ -1.03
PTPRE-208ENST00000479896 WWC2-AS2Q96NR7 200 aa8.62□□□□□ -1.03
PTPRE-208ENST00000479896 NAV3Q8IVL0 2385 aa8.62□□□□□ -1.03
PTPRE-208ENST00000479896 ADAMTS20P59510 1910 aa8.62□□□□□ -1.03
PTPRE-208ENST00000479896 CXCL6P80162 114 aa8.62□□□□□ -1.03
PTPRE-208ENST00000479896 SONP18583 2426 aaKnown RBP8.62□□□□□ -1.03
PTPRE-208ENST00000479896 TYMSOSQ8TAI1 123 aa8.62□□□□□ -1.03
PTPRE-208ENST00000479896 PMAIP1Q13794 54 aa8.61□□□□□ -1.03
PTPRE-208ENST00000479896 NAV2Q8IVL1 2488 aa8.61□□□□□ -1.03
PTPRE-208ENST00000479896 Q8NBF4 154 aa8.61□□□□□ -1.03
PTPRE-208ENST00000479896 ATG2AQ2TAZ0 1938 aa8.6□□□□□ -1.03
PTPRE-208ENST00000479896 TMEM254Q8TBM7 123 aa8.6□□□□□ -1.03
PTPRE-208ENST00000479896 LINC00310P59036 64 aa8.59□□□□□ -1.03
PTPRE-208ENST00000479896 C6orf48Q9UBA6 75 aa8.59□□□□□ -1.03
PTPRE-208ENST00000479896 IGLV5-39A0A0G2JS06 123 aa8.59□□□□□ -1.03
PTPRE-208ENST00000479896 TANC2Q9HCD6 1990 aa8.58□□□□□ -1.04
PTPRE-208ENST00000479896 ATRXP46100 2492 aa8.58□□□□□ -1.04
PTPRE-208ENST00000479896 PHF5AQ7RTV0 110 aaKnown RBP8.58□□□□□ -1.04
PTPRE-208ENST00000479896 PSPHP1O15172 72 aa8.58□□□□□ -1.04
PTPRE-208ENST00000479896 ACYP2P14621 99 aa8.57□□□□□ -1.04
PTPRE-208ENST00000479896 IGHV3OR16-9A0A0B4J2B5 98 aa8.57□□□□□ -1.04
PTPRE-208ENST00000479896 A0A096LNJ9 63 aa8.56□□□□□ -1.04
PTPRE-208ENST00000479896 SMIM29Q86T20 159 aa8.56□□□□□ -1.04
PTPRE-208ENST00000479896 LINC00846Q9NV44 126 aa8.56□□□□□ -1.04
PTPRE-208ENST00000479896 LINC00313P59037 77 aa8.56□□□□□ -1.04
PTPRE-208ENST00000479896 A0A1B0GU69 56 aa8.56□□□□□ -1.04
PTPRE-208ENST00000479896 SPATA3Q8NHX4 192 aa8.55□□□□□ -1.04
PTPRE-208ENST00000479896 EXPH5Q8NEV8 1989 aa8.55□□□□□ -1.04
PTPRE-208ENST00000479896 A0A1B0GW54 56 aa8.55□□□□□ -1.04
PTPRE-208ENST00000479896 HCFC1P51610 2035 aa8.55□□□□□ -1.04
PTPRE-208ENST00000479896 ATP11AUNQ6ZP68 121 aa8.54□□□□□ -1.04
PTPRE-208ENST00000479896 FAM19A4Q96LR4 140 aa8.54□□□□□ -1.04
PTPRE-208ENST00000479896 RPL37AP61513 92 aaKnown RBP8.54□□□□□ -1.04
PTPRE-208ENST00000479896 ELOF1P60002 83 aaKnown RBP8.53□□□□□ -1.04
PTPRE-208ENST00000479896 EPM2AB3EWF7 344 aa8.53□□□□□ -1.04
PTPRE-208ENST00000479896 CHTF8P0CG12 524 aa8.53□□□□□ -1.04
PTPRE-208ENST00000479896 LINC00588Q9Y4M8 146 aa8.53□□□□□ -1.04
PTPRE-208ENST00000479896 PTPRSQ13332 1948 aa8.52□□□□□ -1.05
PTPRE-208ENST00000479896 LINC01546A6NGU7 62 aa8.51□□□□□ -1.05
PTPRE-208ENST00000479896 Q6ZRX8 168 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms