RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 ALKBH7Q9BT30 221 aaPredicted RBP10.08□□□□□ -0.8
VIM-204ENST00000478746 CDIP1Q9H305 208 aa10.08□□□□□ -0.8
VIM-204ENST00000478746 LOC389332A0A1B0GUA5 103 aa10.07□□□□□ -0.8
VIM-204ENST00000478746 CRYGAP11844 174 aa10.07□□□□□ -0.8
VIM-204ENST00000478746 C9orf129Q5T035 196 aaKnown RBP10.07□□□□□ -0.8
VIM-204ENST00000478746 FAM104AQ969W3 186 aa10.07□□□□□ -0.8
VIM-204ENST00000478746 SPANXA1Q9NS26 97 aa10.07□□□□□ -0.8
VIM-204ENST00000478746 IFITM10A6NMD0 228 aa10.06□□□□□ -0.8
VIM-204ENST00000478746 PRSS47A8MTI9 375 aa10.06□□□□□ -0.8
VIM-204ENST00000478746 NDUFC2-KCTD14E9PQ53 114 aa10.06□□□□□ -0.8
VIM-204ENST00000478746 NUPR1O60356 82 aa10.06□□□□□ -0.8
VIM-204ENST00000478746 MRPS36P82909 103 aaKnown RBP10.06□□□□□ -0.8
VIM-204ENST00000478746 KIAA0087Q14695 138 aa10.06□□□□□ -0.8
VIM-204ENST00000478746 TRBV30A0A0K0K1B3 111 aa10.05□□□□□ -0.8
VIM-204ENST00000478746 TRGC2P03986 189 aa10.05□□□□□ -0.8
VIM-204ENST00000478746 RETNLBQ9BQ08 111 aa10.05□□□□□ -0.8
VIM-204ENST00000478746 NXT2Q9NPJ8 142 aaKnown RBP10.05□□□□□ -0.8
VIM-204ENST00000478746 C2orf82Q6UX34 121 aa10.04□□□□□ -0.8
VIM-204ENST00000478746 Q8N8P6 123 aa10.04□□□□□ -0.8
VIM-204ENST00000478746 PACRGQ96M98 296 aaPredicted RBP10.04□□□□□ -0.8
VIM-204ENST00000478746 C22orf24Q9Y442 160 aa10.03□□□□□ -0.8
VIM-204ENST00000478746 IFI27P40305 119 aaPredicted RBP10.02□□□□□ -0.81
VIM-204ENST00000478746 RPL28P46779 137 aaKnown RBP10.02□□□□□ -0.81
VIM-204ENST00000478746 LBHQ53QV2 105 aaPredicted RBP10.02□□□□□ -0.81
VIM-204ENST00000478746 C18orf32Q8TCD1 76 aa10.02□□□□□ -0.81
VIM-204ENST00000478746 TPRXLQ17RH7 258 aa10.01□□□□□ -0.81
VIM-204ENST00000478746 FA2HQ7L5A8 372 aa10.01□□□□□ -0.81
VIM-204ENST00000478746 K7EMI3 77 aa10□□□□□ -0.81
VIM-204ENST00000478746 ORMDL2Q53FV1 153 aa10□□□□□ -0.81
VIM-204ENST00000478746 IGLV7-46A0A075B6I9 117 aa9.99□□□□□ -0.81
VIM-204ENST00000478746 LCE2DQ5TA82 110 aaPredicted RBP9.99□□□□□ -0.81
VIM-204ENST00000478746 ANAPC11Q9NYG5 84 aa9.99□□□□□ -0.81
VIM-204ENST00000478746 FSIP2Q5CZC0 6907 aa9.98□□□□□ -0.81
VIM-204ENST00000478746 BCE1O60756 84 aa9.98□□□□□ -0.81
VIM-204ENST00000478746 RAB5BP61020 215 aa9.98□□□□□ -0.81
VIM-204ENST00000478746 LINC00242Q5T6M2 205 aa9.98□□□□□ -0.81
VIM-204ENST00000478746 LINC00469Q8N7U9 141 aa9.98□□□□□ -0.81
VIM-204ENST00000478746 LINC00173Q6ZV60 143 aa9.97□□□□□ -0.81
VIM-204ENST00000478746 CRCT1Q9UGL9 99 aa9.97□□□□□ -0.81
VIM-204ENST00000478746 LINC00614P0C842 121 aa9.96□□□□□ -0.82
VIM-204ENST00000478746 G0S2P27469 103 aa9.96□□□□□ -0.82
VIM-204ENST00000478746 KRTAP13-2Q52LG2 175 aa9.96□□□□□ -0.82
VIM-204ENST00000478746 BAGE3Q86Y29 109 aa9.96□□□□□ -0.82
VIM-204ENST00000478746 LINC00304Q8N9R0 145 aa9.96□□□□□ -0.82
VIM-204ENST00000478746 LINC01546A6NGU7 62 aa9.95□□□□□ -0.82
VIM-204ENST00000478746 TMEM141Q96I45 108 aa9.95□□□□□ -0.82
VIM-204ENST00000478746 XAGE1AQ9HD64 81 aa9.95□□□□□ -0.82
VIM-204ENST00000478746 CYSLTR1Q9Y271 337 aa9.95□□□□□ -0.82
VIM-204ENST00000478746 PYGO1Q9Y3Y4 419 aa9.95□□□□□ -0.82
VIM-204ENST00000478746 IGLV4-3A0A075B6K6 122 aa9.94□□□□□ -0.82
VIM-204ENST00000478746 C2orf66Q6UXQ4 117 aa9.94□□□□□ -0.82
VIM-204ENST00000478746 MRPL55Q7Z7F7 128 aaKnown RBP9.94□□□□□ -0.82
VIM-204ENST00000478746 LINC01561Q8N1V8 128 aa9.94□□□□□ -0.82
VIM-204ENST00000478746 TP73-AS1Q9UF72 201 aa9.94□□□□□ -0.82
VIM-204ENST00000478746 PRSS2P07478 247 aa9.93□□□□□ -0.82
VIM-204ENST00000478746 CKS1BP61024 79 aa9.93□□□□□ -0.82
VIM-204ENST00000478746 CHCHD1Q96BP2 118 aaKnown RBP9.93□□□□□ -0.82
VIM-204ENST00000478746 URB1-AS1Q96HZ7 61 aa9.93□□□□□ -0.82
VIM-204ENST00000478746 HIST1H2BKO60814 126 aa9.92□□□□□ -0.82
VIM-204ENST00000478746 HIST1H2BJP06899 126 aa9.92□□□□□ -0.82
VIM-204ENST00000478746 HIST1H2BOP23527 126 aa9.92□□□□□ -0.82
VIM-204ENST00000478746 HIST1H2BBP33778 126 aa9.92□□□□□ -0.82
VIM-204ENST00000478746 LINC01547P58512 204 aaPredicted RBP9.92□□□□□ -0.82
VIM-204ENST00000478746 HIST1H2BDP58876 126 aa9.92□□□□□ -0.82
VIM-204ENST00000478746 HIST1H2BCP62807 126 aa9.92□□□□□ -0.82
VIM-204ENST00000478746 HIST2H2BEQ16778 126 aa9.92□□□□□ -0.82
VIM-204ENST00000478746 C6orf226Q5I0X4 101 aa9.92□□□□□ -0.82
VIM-204ENST00000478746 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.92□□□□□ -0.82
VIM-204ENST00000478746 TEX43Q6ZNM6 134 aa9.92□□□□□ -0.82
VIM-204ENST00000478746 HIST1H2BHQ93079 126 aa9.92□□□□□ -0.82
VIM-204ENST00000478746 HIST1H2BNQ99877 126 aa9.92□□□□□ -0.82
VIM-204ENST00000478746 HIST1H2BMQ99879 126 aa9.92□□□□□ -0.82
VIM-204ENST00000478746 LINC01549A6NIU2 74 aa9.91□□□□□ -0.82
VIM-204ENST00000478746 Q6ZN92 141 aa9.91□□□□□ -0.82
VIM-204ENST00000478746 TOMM6Q96B49 74 aa9.91□□□□□ -0.82
VIM-204ENST00000478746 C2orf88Q9BSF0 95 aa9.91□□□□□ -0.82
VIM-204ENST00000478746 PPDPFQ9H3Y8 114 aa9.91□□□□□ -0.82
VIM-204ENST00000478746 TOMM7Q9P0U1 55 aa9.91□□□□□ -0.82
VIM-204ENST00000478746 RPL37AP8A6NKH3 93 aa9.9□□□□□ -0.82
VIM-204ENST00000478746 HSBP1O75506 76 aa9.9□□□□□ -0.82
VIM-204ENST00000478746 HBDP02042 147 aa9.9□□□□□ -0.82
VIM-204ENST00000478746 FAM229BQ4G0N7 80 aa9.9□□□□□ -0.82
VIM-204ENST00000478746 IGKV2D-26A0A0A0MRZ7 120 aa9.89□□□□□ -0.83
VIM-204ENST00000478746 SERF1AO75920 110 aa9.89□□□□□ -0.83
VIM-204ENST00000478746 CTAG1AP78358 180 aa9.89□□□□□ -0.83
VIM-204ENST00000478746 LINC00167Q96N53 147 aa9.89□□□□□ -0.83
VIM-204ENST00000478746 SCGB3A1Q96QR1 104 aa9.89□□□□□ -0.83
VIM-204ENST00000478746 PMCHL1Q16048 86 aa9.88□□□□□ -0.83
VIM-204ENST00000478746 UBE2AP49459 152 aa9.87□□□□□ -0.83
VIM-204ENST00000478746 ZC2HC1BQ5TFG8 222 aa9.87□□□□□ -0.83
VIM-204ENST00000478746 ERASQ7Z444 233 aa9.87□□□□□ -0.83
VIM-204ENST00000478746 Q8IZM0 81 aa9.87□□□□□ -0.83
VIM-204ENST00000478746 A0A096LNJ9 63 aa9.86□□□□□ -0.83
VIM-204ENST00000478746 IGIPA6NJ69 53 aa9.86□□□□□ -0.83
VIM-204ENST00000478746 NPSP0C0P6 89 aa9.86□□□□□ -0.83
VIM-204ENST00000478746 PAPPA-AS1Q5QFB9 102 aa9.86□□□□□ -0.83
VIM-204ENST00000478746 TIMM17AQ99595 171 aa9.86□□□□□ -0.83
VIM-204ENST00000478746 VCX2Q9H322 139 aa9.86□□□□□ -0.83
VIM-204ENST00000478746 NDUFA6P56556 154 aa9.85□□□□□ -0.83
VIM-204ENST00000478746 LINC00310P59036 64 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms