RNA–Protein interactions for RNA: ENST00000478736.1

PDE1C-208, Transcript of phosphodiesterase 1C, humanhuman

TSL 3

Gene PDE1C, Length 495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-208ENST00000478736 USP34Q70CQ2 3546 aa0.17□□□□□ -2.38
PDE1C-208ENST00000478736 MYOZ3Q8TDC0 251 aa0.17□□□□□ -2.38
PDE1C-208ENST00000478736 LRP1BQ9NZR2 4599 aa0.17□□□□□ -2.38
PDE1C-208ENST00000478736 LINC00474Q9P2X8 69 aa0.17□□□□□ -2.38
PDE1C-208ENST00000478736 GNG8Q9UK08 70 aa0.17□□□□□ -2.38
PDE1C-208ENST00000478736 IER3IP1Q9Y5U9 82 aa0.17□□□□□ -2.38
PDE1C-208ENST00000478736 SETBP1Q9Y6X0 1596 aa0.17□□□□□ -2.38
PDE1C-208ENST00000478736 MYCBP2O75592 4640 aa0.17□□□□□ -2.38
PDE1C-208ENST00000478736 PSME4Q14997 1843 aa0.17□□□□□ -2.38
PDE1C-208ENST00000478736 WNK3Q9BYP7 1800 aa0.17□□□□□ -2.38
PDE1C-208ENST00000478736 MAPKBP1O60336 1514 aa0.17□□□□□ -2.38
PDE1C-208ENST00000478736 ASPMQ8IZT6 3477 aa0.17□□□□□ -2.38
PDE1C-208ENST00000478736 LRP6O75581 1613 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 PZPP20742 1482 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 HECTD4Q9Y4D8 3996 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 ARHGEF5Q12774 1597 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 C10orf71Q711Q0 1435 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 SBF2Q86WG5 1849 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 FAM24AA6NFZ4 105 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 F8VRH5 84 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 HMGN4O00479 90 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 SPINK8P0C7L1 97 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 S100A1P23297 94 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 MRPS10P82664 201 aaKnown RBP0.16□□□□□ -2.38
PDE1C-208ENST00000478736 Q5BKY6 102 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 BAGE2Q86Y30 109 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 FAM213BQ8TBF2 198 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 CNFNQ9BYD5 112 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 WDFY3Q8IZQ1 3526 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 SVEP1Q4LDE5 3571 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 BIVM-ERCC5R4GMW8 1640 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 VPS13CQ709C8 3753 aa0.16□□□□□ -2.38
PDE1C-208ENST00000478736 LAMA5O15230 3695 aa0.15□□□□□ -2.38
PDE1C-208ENST00000478736 TCHHQ07283 1943 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 SCAPERQ9BY12 1400 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 CSMD2Q7Z408 3487 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 A0A0D9SFI3 127 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 LOC285095A0A1B0GVY8 99 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 IGLC7A0M8Q6 106 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 UQCR11O14957 56 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 SPINK1P00995 79 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 APOC3P02656 99 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 HAMPP81172 84 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 TMEM170BQ5T4T1 132 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 SVBPQ8N300 66 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 DPH3P1Q9H4G8 78 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 LINC00472Q9H8W2 130 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 PRO0255Q9UI72 69 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 ALMS1Q8TCU4 4167 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 LAMC1P11047 1609 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 CC2D2AQ9P2K1 1620 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 SPHKAPQ2M3C7 1700 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 PLXNB2O15031 1838 aa0.15□□□□□ -2.39
PDE1C-208ENST00000478736 KDM5AP29375 1690 aaKnown RBP0.14□□□□□ -2.39
PDE1C-208ENST00000478736 STARD9Q9P2P6 4700 aa0.14□□□□□ -2.39
PDE1C-208ENST00000478736 HMGXB3Q12766 1538 aa0.14□□□□□ -2.39
PDE1C-208ENST00000478736 ARHGAP5Q13017 1502 aa0.14□□□□□ -2.39
PDE1C-208ENST00000478736 TOP2BQ02880 1626 aa0.14□□□□□ -2.39
PDE1C-208ENST00000478736 UQCR10Q9UDW1 63 aa0.14□□□□□ -2.39
PDE1C-208ENST00000478736 LINC01558Q9Y6Z2 57 aa0.14□□□□□ -2.39
PDE1C-208ENST00000478736 PKD1P98161 4303 aa0.14□□□□□ -2.39
PDE1C-208ENST00000478736 DNAH1Q9P2D7 4330 aa0.14□□□□□ -2.39
PDE1C-208ENST00000478736 PKHD1P08F94 4074 aa0.14□□□□□ -2.39
PDE1C-208ENST00000478736 DIP2CQ9Y2E4 1556 aa0.14□□□□□ -2.39
PDE1C-208ENST00000478736 TOPAZ1Q8N9V7 1692 aa0.14□□□□□ -2.39
PDE1C-208ENST00000478736 LYSTQ99698 3801 aa0.14□□□□□ -2.39
PDE1C-208ENST00000478736 EHBP1L1Q8N3D4 1523 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 RAPGEF6Q8TEU7 1601 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 CDH23Q9H251 3354 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 TRAV22A0A0B4J277 110 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 CHKB-CPT1BH3BT56 60 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 BCE1O60756 84 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 SFT2D2O95562 160 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 IFITM1P13164 125 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 GNG11P61952 73 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 DCDP81605 110 aaKnown RBP0.13□□□□□ -2.39
PDE1C-208ENST00000478736 WHAMMP3Q1A5X7 153 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 Q6JHZ5 121 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 FAM167A-AS1Q96KT0 104 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 CDC42SE2Q9NRR3 84 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 LINC00846Q9NV44 126 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 SPCS1Q9Y6A9 102 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 SHANK2Q9UPX8 1470 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 UTRNP46939 3433 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 CHD1O14646 1710 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 NHSL1Q5SYE7 1610 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 ZFYVE16Q7Z3T8 1539 aa0.13□□□□□ -2.39
PDE1C-208ENST00000478736 DYNC1H1Q14204 4646 aaKnown RBP0.12□□□□□ -2.39
PDE1C-208ENST00000478736 CSMD3Q7Z407 3707 aa0.12□□□□□ -2.39
PDE1C-208ENST00000478736 DNAH14Q0VDD8 3507 aa0.12□□□□□ -2.39
PDE1C-208ENST00000478736 PLECQ15149 4684 aaKnown RBP0.12□□□□□ -2.39
PDE1C-208ENST00000478736 SCN7AQ01118 1682 aa0.12□□□□□ -2.39
PDE1C-208ENST00000478736 NAP1L6A6NFF2 107 aa0.12□□□□□ -2.39
PDE1C-208ENST00000478736 S100A3P33764 101 aa0.12□□□□□ -2.39
PDE1C-208ENST00000478736 Q0VG73 95 aa0.12□□□□□ -2.39
PDE1C-208ENST00000478736 GTF2H5Q6ZYL4 71 aa0.12□□□□□ -2.39
PDE1C-208ENST00000478736 FAM223AQ8IWN6 122 aa0.12□□□□□ -2.39
PDE1C-208ENST00000478736 BTAF1O14981 1849 aa0.12□□□□□ -2.39
PDE1C-208ENST00000478736 SMG1Q96Q15 3661 aaKnown RBP0.11□□□□□ -2.39
PDE1C-208ENST00000478736 ABCA3Q99758 1704 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms