RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 TRBV30A0A0K0K1B3 111 aa9.82□□□□□ -0.84
GARNL3-215ENST00000478702 ODF1Q14990 250 aa9.82□□□□□ -0.84
GARNL3-215ENST00000478702 GEMIN7Q9H840 131 aaKnown RBP9.82□□□□□ -0.84
GARNL3-215ENST00000478702 A0A1W2PNN7 141 aa9.81□□□□□ -0.84
GARNL3-215ENST00000478702 C9orf116Q5BN46 136 aaPredicted RBP9.81□□□□□ -0.84
GARNL3-215ENST00000478702 C2orf82Q6UX34 121 aa9.81□□□□□ -0.84
GARNL3-215ENST00000478702 Q6ZRP5 223 aa9.81□□□□□ -0.84
GARNL3-215ENST00000478702 Q8IZM0 81 aa9.81□□□□□ -0.84
GARNL3-215ENST00000478702 IGLV5-45A0A087WSX0 123 aa9.8□□□□□ -0.84
GARNL3-215ENST00000478702 TINCRA0A1B0GVN0 87 aa9.8□□□□□ -0.84
GARNL3-215ENST00000478702 PACRGQ96M98 296 aaPredicted RBP9.8□□□□□ -0.84
GARNL3-215ENST00000478702 PRSS2P07478 247 aa9.79□□□□□ -0.84
GARNL3-215ENST00000478702 PMVKQ15126 192 aa9.79□□□□□ -0.84
GARNL3-215ENST00000478702 LINC00469Q8N7U9 141 aa9.79□□□□□ -0.84
GARNL3-215ENST00000478702 CST9LQ9H4G1 147 aa9.79□□□□□ -0.84
GARNL3-215ENST00000478702 TOMM7Q9P0U1 55 aa9.79□□□□□ -0.84
GARNL3-215ENST00000478702 SMIM1B2RUZ4 78 aa9.78□□□□□ -0.84
GARNL3-215ENST00000478702 HBDP02042 147 aa9.78□□□□□ -0.84
GARNL3-215ENST00000478702 LINC00614P0C842 121 aa9.78□□□□□ -0.84
GARNL3-215ENST00000478702 RAB5BP61020 215 aa9.78□□□□□ -0.84
GARNL3-215ENST00000478702 CBLN2Q8IUK8 224 aa9.78□□□□□ -0.84
GARNL3-215ENST00000478702 LINC01600Q96MT4 127 aa9.78□□□□□ -0.84
GARNL3-215ENST00000478702 NDUFC2-KCTD14E9PQ53 114 aa9.77□□□□□ -0.85
GARNL3-215ENST00000478702 CKS1BP61024 79 aa9.76□□□□□ -0.85
GARNL3-215ENST00000478702 GAGE2EQ4V326 116 aa9.76□□□□□ -0.85
GARNL3-215ENST00000478702 C6orf226Q5I0X4 101 aa9.76□□□□□ -0.85
GARNL3-215ENST00000478702 GAGE2DQ9UEU5 116 aa9.76□□□□□ -0.85
GARNL3-215ENST00000478702 FAM168BA1KXE4 195 aa9.75□□□□□ -0.85
GARNL3-215ENST00000478702 CXCL5P42830 114 aa9.75□□□□□ -0.85
GARNL3-215ENST00000478702 PMCHL1Q16048 86 aa9.75□□□□□ -0.85
GARNL3-215ENST00000478702 PDZD11Q5EBL8 140 aa9.75□□□□□ -0.85
GARNL3-215ENST00000478702 SLC7A5P1Q8MH63 180 aa9.75□□□□□ -0.85
GARNL3-215ENST00000478702 F8VRH5 84 aa9.74□□□□□ -0.85
GARNL3-215ENST00000478702 IGLC3P0DOY3 106 aa9.74□□□□□ -0.85
GARNL3-215ENST00000478702 PHF5AQ7RTV0 110 aaKnown RBP9.74□□□□□ -0.85
GARNL3-215ENST00000478702 FAM19A5Q7Z5A7 132 aaPredicted RBP9.73□□□□□ -0.85
GARNL3-215ENST00000478702 ATP5LO75964 103 aa9.72□□□□□ -0.85
GARNL3-215ENST00000478702 SPINK8P0C7L1 97 aa9.72□□□□□ -0.85
GARNL3-215ENST00000478702 NDUFA6P56556 154 aa9.72□□□□□ -0.85
GARNL3-215ENST00000478702 C9orf129Q5T035 196 aaKnown RBP9.72□□□□□ -0.85
GARNL3-215ENST00000478702 KRTAP7-1Q8IUC3 87 aa9.72□□□□□ -0.85
GARNL3-215ENST00000478702 COX7B2Q8TF08 81 aa9.72□□□□□ -0.85
GARNL3-215ENST00000478702 H3BRM9 83 aa9.71□□□□□ -0.86
GARNL3-215ENST00000478702 KRTAP10-8P60410 259 aa9.71□□□□□ -0.86
GARNL3-215ENST00000478702 CHCHD1Q96BP2 118 aaKnown RBP9.71□□□□□ -0.86
GARNL3-215ENST00000478702 PSORS1C2Q9UIG4 136 aa9.71□□□□□ -0.86
GARNL3-215ENST00000478702 M0QXV9 152 aa9.7□□□□□ -0.86
GARNL3-215ENST00000478702 LPAP08519 4548 aa9.69□□□□□ -0.86
GARNL3-215ENST00000478702 IGLV5-39A0A0G2JS06 123 aa9.69□□□□□ -0.86
GARNL3-215ENST00000478702 ZNF22P17026 224 aaPredicted RBP9.69□□□□□ -0.86
GARNL3-215ENST00000478702 SPINK6Q6UWN8 80 aa9.69□□□□□ -0.86
GARNL3-215ENST00000478702 SRSF9Q13242 221 aaKnown RBP eCLIP9.68□□□□□ -0.86
GARNL3-215ENST00000478702 C11orf86A6NJI1 115 aa9.67□□□□□ -0.86
GARNL3-215ENST00000478702 BAGE3Q86Y29 109 aa9.67□□□□□ -0.86
GARNL3-215ENST00000478702 KRTAP11-1Q8IUC1 163 aa9.67□□□□□ -0.86
GARNL3-215ENST00000478702 TRGC2P03986 189 aa9.66□□□□□ -0.86
GARNL3-215ENST00000478702 C1orf137Q5JT78 98 aa9.66□□□□□ -0.86
GARNL3-215ENST00000478702 XAGE1AQ9HD64 81 aa9.66□□□□□ -0.86
GARNL3-215ENST00000478702 HSBP1O75506 76 aa9.65□□□□□ -0.86
GARNL3-215ENST00000478702 TRAV12-1A0A0B4J245 112 aa9.64□□□□□ -0.87
GARNL3-215ENST00000478702 REG3GQ6UW15 175 aa9.64□□□□□ -0.87
GARNL3-215ENST00000478702 IFI27L1Q96BM0 104 aa9.64□□□□□ -0.87
GARNL3-215ENST00000478702 LINC00310P59036 64 aa9.63□□□□□ -0.87
GARNL3-215ENST00000478702 UBE2BP63146 152 aa9.63□□□□□ -0.87
GARNL3-215ENST00000478702 CHTOPQ9Y3Y2 248 aaKnown RBP9.63□□□□□ -0.87
GARNL3-215ENST00000478702 COLCA2A8K830 154 aa9.62□□□□□ -0.87
GARNL3-215ENST00000478702 IGLV7-43P04211 117 aa9.62□□□□□ -0.87
GARNL3-215ENST00000478702 TMEM170BQ5T4T1 132 aa9.62□□□□□ -0.87
GARNL3-215ENST00000478702 FAM19A2Q8N3H0 131 aa9.61□□□□□ -0.87
GARNL3-215ENST00000478702 SERF1AO75920 110 aa9.6□□□□□ -0.87
GARNL3-215ENST00000478702 TP73-AS1Q9UF72 201 aa9.6□□□□□ -0.87
GARNL3-215ENST00000478702 C22orf24Q9Y442 160 aa9.6□□□□□ -0.87
GARNL3-215ENST00000478702 SFTA2Q6UW10 78 aa9.58□□□□□ -0.88
GARNL3-215ENST00000478702 ERG28Q9UKR5 140 aa9.58□□□□□ -0.88
GARNL3-215ENST00000478702 IGLV5-37A0A075B6J1 123 aa9.57□□□□□ -0.88
GARNL3-215ENST00000478702 TMEM223A0PJW6 202 aa9.57□□□□□ -0.88
GARNL3-215ENST00000478702 LBHQ53QV2 105 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-215ENST00000478702 MRPL55Q7Z7F7 128 aaKnown RBP9.57□□□□□ -0.88
GARNL3-215ENST00000478702 DIRC1Q969H9 104 aa9.57□□□□□ -0.88
GARNL3-215ENST00000478702 ZNF625Q96I27 306 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-215ENST00000478702 LEPROTL1O95214 131 aa9.56□□□□□ -0.88
GARNL3-215ENST00000478702 PFN2P35080 140 aa9.56□□□□□ -0.88
GARNL3-215ENST00000478702 H0Y9J4 135 aa9.55□□□□□ -0.88
GARNL3-215ENST00000478702 COX17Q14061 63 aa9.55□□□□□ -0.88
GARNL3-215ENST00000478702 KRTAP3-3Q9BYR6 98 aa9.55□□□□□ -0.88
GARNL3-215ENST00000478702 KRTAP3-2Q9BYR7 98 aa9.55□□□□□ -0.88
GARNL3-215ENST00000478702 H0Y8G0 127 aa9.54□□□□□ -0.88
GARNL3-215ENST00000478702 NUPR1O60356 82 aa9.54□□□□□ -0.88
GARNL3-215ENST00000478702 SCO1O75880 301 aa9.54□□□□□ -0.88
GARNL3-215ENST00000478702 SND1-IT1Q9HBX3 110 aa9.53□□□□□ -0.88
GARNL3-215ENST00000478702 HSPB8Q9UJY1 196 aa9.53□□□□□ -0.88
GARNL3-215ENST00000478702 NKAPP1Q8N9T2 125 aa9.52□□□□□ -0.89
GARNL3-215ENST00000478702 LINC00167Q96N53 147 aa9.52□□□□□ -0.89
GARNL3-215ENST00000478702 FABP4P15090 132 aa9.51□□□□□ -0.89
GARNL3-215ENST00000478702 GAGE10A6NGK3 116 aa9.5□□□□□ -0.89
GARNL3-215ENST00000478702 VPREB1P12018 145 aa9.5□□□□□ -0.89
GARNL3-215ENST00000478702 RPL37AP8A6NKH3 93 aa9.49□□□□□ -0.89
GARNL3-215ENST00000478702 ZNF861PO60384 105 aa9.49□□□□□ -0.89
GARNL3-215ENST00000478702 HIST1H2BKO60814 126 aa9.49□□□□□ -0.89
GARNL3-215ENST00000478702 HIST1H2BJP06899 126 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms