RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 LITAFQ99732 161 aa4.59□□□□□ -1.67
LDB3-206ENST00000477489 TRAV10A0A0B4J240 114 aa4.58□□□□□ -1.68
LDB3-206ENST00000477489 A0A1W2PPM0 123 aa4.58□□□□□ -1.68
LDB3-206ENST00000477489 LYPD5Q6UWN5 251 aa4.58□□□□□ -1.68
LDB3-206ENST00000477489 COX7B2Q8TF08 81 aa4.58□□□□□ -1.68
LDB3-206ENST00000477489 Q9H8V8 135 aa4.58□□□□□ -1.68
LDB3-206ENST00000477489 PRR34Q9NV39 138 aa4.58□□□□□ -1.68
LDB3-206ENST00000477489 IGHV3-64A0A075B6Q5 118 aa4.57□□□□□ -1.68
LDB3-206ENST00000477489 DEFB131BA0A096LNP1 70 aa4.57□□□□□ -1.68
LDB3-206ENST00000477489 A0A0J9YWU9 116 aa4.57□□□□□ -1.68
LDB3-206ENST00000477489 GAGE10A6NGK3 116 aa4.57□□□□□ -1.68
LDB3-206ENST00000477489 IBA57-AS1B1ANH7 110 aa4.57□□□□□ -1.68
LDB3-206ENST00000477489 IGLL5B9A064 214 aa4.57□□□□□ -1.68
LDB3-206ENST00000477489 H3BUT2 72 aa4.57□□□□□ -1.68
LDB3-206ENST00000477489 K7EIL1 84 aa4.57□□□□□ -1.68
LDB3-206ENST00000477489 K7EP34 96 aa4.57□□□□□ -1.68
LDB3-206ENST00000477489 APOMO95445 188 aa4.57□□□□□ -1.68
LDB3-206ENST00000477489 REG3AQ06141 175 aa4.57□□□□□ -1.68
LDB3-206ENST00000477489 Q6ZTC4 211 aa4.57□□□□□ -1.68
LDB3-206ENST00000477489 Q8IZM0 81 aa4.57□□□□□ -1.68
LDB3-206ENST00000477489 PRO1854Q9UHT4 67 aa4.57□□□□□ -1.68
LDB3-206ENST00000477489 TRBV20-1A0A075B6N2 111 aa4.56□□□□□ -1.68
LDB3-206ENST00000477489 F8WDY8 70 aa4.56□□□□□ -1.68
LDB3-206ENST00000477489 K7EP13 123 aa4.56□□□□□ -1.68
LDB3-206ENST00000477489 COX7A2LO14548 114 aa4.56□□□□□ -1.68
LDB3-206ENST00000477489 ANGP03950 147 aaKnown RBP4.56□□□□□ -1.68
LDB3-206ENST00000477489 HTN3P15516 51 aa4.56□□□□□ -1.68
LDB3-206ENST00000477489 COX17Q14061 63 aa4.56□□□□□ -1.68
LDB3-206ENST00000477489 MUSTN1Q8IVN3 82 aa4.56□□□□□ -1.68
LDB3-206ENST00000477489 RAB37Q96AX2 223 aa4.56□□□□□ -1.68
LDB3-206ENST00000477489 RETNQ9HD89 108 aa4.56□□□□□ -1.68
LDB3-206ENST00000477489 A4D1N5 150 aa4.55□□□□□ -1.68
LDB3-206ENST00000477489 CRPP02741 224 aa4.55□□□□□ -1.68
LDB3-206ENST00000477489 PRSS2P07478 247 aa4.55□□□□□ -1.68
LDB3-206ENST00000477489 CFC1BP0CG36 223 aa4.55□□□□□ -1.68
LDB3-206ENST00000477489 CFC1P0CG37 223 aa4.55□□□□□ -1.68
LDB3-206ENST00000477489 LINC01556Q5JQF7 62 aa4.55□□□□□ -1.68
LDB3-206ENST00000477489 MEIG1Q5JSS6 88 aa4.55□□□□□ -1.68
LDB3-206ENST00000477489 LINC00269Q8N2A0 174 aa4.55□□□□□ -1.68
LDB3-206ENST00000477489 CHCHD10Q8WYQ3 142 aaPredicted RBP4.55□□□□□ -1.68
LDB3-206ENST00000477489 KLK5Q9Y337 293 aaPredicted RBP4.55□□□□□ -1.68
LDB3-206ENST00000477489 SPCS1Q9Y6A9 102 aa4.55□□□□□ -1.68
LDB3-206ENST00000477489 K7ERJ3 54 aa4.54□□□□□ -1.68
LDB3-206ENST00000477489 NHLRC4P0CG21 123 aaPredicted RBP4.54□□□□□ -1.68
LDB3-206ENST00000477489 LINC00308Q8TCZ7 52 aa4.54□□□□□ -1.68
LDB3-206ENST00000477489 B9D2Q9BPU9 175 aa4.54□□□□□ -1.68
LDB3-206ENST00000477489 IGKV3OR2-268A0A0C4DH90 116 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 LOC107984156A0A0G2JMH3 177 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 TRBV30A0A0K0K1B3 111 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 TSPAN13O95857 204 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 IGHV3-33P01772 117 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 COX6CP09669 75 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 DNAH10OSP0CZ25 163 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 MALP21145 153 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 XCL1P47992 114 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 NANOS2P60321 138 aaKnown RBP4.53□□□□□ -1.68
LDB3-206ENST00000477489 FOXI1Q12951 378 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 C6orf226Q5I0X4 101 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 DEFB121Q5J5C9 76 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 ADAMTSL4-AS1Q5T5F5 129 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 CFAP161Q6P656 301 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 ARL17AQ8IVW1 177 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 UPK3BQ9BT76 320 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 KRTAP3-1Q9BYR8 98 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 ERG28Q9UKR5 140 aa4.53□□□□□ -1.68
LDB3-206ENST00000477489 DNAH3Q8TD57 4116 aa4.52□□□□□ -1.69
LDB3-206ENST00000477489 GVQW2A0A096LPI5 108 aaPredicted RBP4.52□□□□□ -1.69
LDB3-206ENST00000477489 F8W1H4 67 aa4.52□□□□□ -1.69
LDB3-206ENST00000477489 CKS1BP61024 79 aa4.52□□□□□ -1.69
LDB3-206ENST00000477489 C5orf38Q86SI9 138 aa4.52□□□□□ -1.69
LDB3-206ENST00000477489 TOMM7Q9P0U1 55 aa4.52□□□□□ -1.69
LDB3-206ENST00000477489 KLK12Q9UKR0 248 aa4.52□□□□□ -1.69
LDB3-206ENST00000477489 TRAV13-2A0A0B4J235 113 aa4.51□□□□□ -1.69
LDB3-206ENST00000477489 M0QXV9 152 aa4.51□□□□□ -1.69
LDB3-206ENST00000477489 CCL18P55774 89 aa4.51□□□□□ -1.69
LDB3-206ENST00000477489 KIAA0087Q14695 138 aa4.51□□□□□ -1.69
LDB3-206ENST00000477489 ESRGQ1W209 222 aa4.51□□□□□ -1.69
LDB3-206ENST00000477489 ENHOQ6UWT2 76 aa4.51□□□□□ -1.69
LDB3-206ENST00000477489 RMI2Q96E14 147 aa4.51□□□□□ -1.69
LDB3-206ENST00000477489 GAGE12HA6NDE8 117 aa4.5□□□□□ -1.69
LDB3-206ENST00000477489 NDUFC2O95298 119 aa4.5□□□□□ -1.69
LDB3-206ENST00000477489 MRAPQ8TCY5 172 aa4.5□□□□□ -1.69
LDB3-206ENST00000477489 UBE2WQ96B02 151 aa4.5□□□□□ -1.69
LDB3-206ENST00000477489 C2orf48Q96LS8 159 aa4.5□□□□□ -1.69
LDB3-206ENST00000477489 LINC01600Q96MT4 127 aa4.5□□□□□ -1.69
LDB3-206ENST00000477489 PSMB2P49721 201 aa4.49□□□□□ -1.69
LDB3-206ENST00000477489 LINC00158P58513 81 aa4.49□□□□□ -1.69
LDB3-206ENST00000477489 SPAG11BQ08648 103 aa4.49□□□□□ -1.69
LDB3-206ENST00000477489 ATXN8Q156A1 80 aa4.49□□□□□ -1.69
LDB3-206ENST00000477489 Q1RN00 199 aa4.49□□□□□ -1.69
LDB3-206ENST00000477489 CLPSL2Q6UWE3 100 aa4.49□□□□□ -1.69
LDB3-206ENST00000477489 WFDC10BQ8IUB3 73 aa4.49□□□□□ -1.69
LDB3-206ENST00000477489 MIR7-3HGQ8N6C7 128 aa4.49□□□□□ -1.69
LDB3-206ENST00000477489 C1orf43Q9BWL3 253 aa4.49□□□□□ -1.69
LDB3-206ENST00000477489 K7ERU9 68 aa4.48□□□□□ -1.69
LDB3-206ENST00000477489 SCGB1C2P0DMR2 95 aa4.48□□□□□ -1.69
LDB3-206ENST00000477489 KRTAP26-1Q6PEX3 210 aa4.48□□□□□ -1.69
LDB3-206ENST00000477489 SOSTDC1Q6X4U4 206 aa4.48□□□□□ -1.69
LDB3-206ENST00000477489 NTN5Q8WTR8 489 aaPredicted RBP4.48□□□□□ -1.69
LDB3-206ENST00000477489 CDIP1Q9H305 208 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms