RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 LINC01547P58512 204 aaPredicted RBP13.38□□□□□ -0.27
VARS2-209ENST00000477288 Q8N814 137 aa13.38□□□□□ -0.27
VARS2-209ENST00000477288 XGP55808 180 aa13.37□□□□□ -0.27
VARS2-209ENST00000477288 COX6A2Q02221 97 aa13.37□□□□□ -0.27
VARS2-209ENST00000477288 IGLV1-51P01701 117 aa13.36□□□□□ -0.27
VARS2-209ENST00000477288 MUC7Q8TAX7 377 aa13.36□□□□□ -0.27
VARS2-209ENST00000477288 Q9BRP9 147 aa13.36□□□□□ -0.27
VARS2-209ENST00000477288 DEFB116Q30KQ4 102 aa13.35□□□□□ -0.27
VARS2-209ENST00000477288 A0A087WYN8 130 aa13.35□□□□□ -0.27
VARS2-209ENST00000477288 PTPRSQ13332 1948 aa13.35□□□□□ -0.27
VARS2-209ENST00000477288 LINC00694P0DN24 101 aa13.35□□□□□ -0.27
VARS2-209ENST00000477288 C1orf134Q5TEV5 83 aa13.35□□□□□ -0.27
VARS2-209ENST00000477288 IGLV4-60A0A075B6I1 120 aa13.34□□□□□ -0.27
VARS2-209ENST00000477288 A0A087WVE0 104 aa13.34□□□□□ -0.27
VARS2-209ENST00000477288 ANKRD11Q6UB99 2663 aaPredicted RBP13.33□□□□□ -0.27
VARS2-209ENST00000477288 IGIPA6NJ69 53 aa13.33□□□□□ -0.28
VARS2-209ENST00000477288 TRAV7A0A075B6U4 112 aa13.32□□□□□ -0.28
VARS2-209ENST00000477288 SMIM1B2RUZ4 78 aa13.32□□□□□ -0.28
VARS2-209ENST00000477288 CHCHD7Q9BUK0 85 aa13.32□□□□□ -0.28
VARS2-209ENST00000477288 BEAN1Q3B7T3 259 aa13.31□□□□□ -0.28
VARS2-209ENST00000477288 SMIM26A0A096LP01 95 aa13.31□□□□□ -0.28
VARS2-209ENST00000477288 FHL2Q14192 279 aa13.3□□□□□ -0.28
VARS2-209ENST00000477288 LRP4O75096 1905 aa13.3□□□□□ -0.28
VARS2-209ENST00000477288 PMAIP1Q13794 54 aa13.3□□□□□ -0.28
VARS2-209ENST00000477288 PRRC2AP48634 2157 aaKnown RBP13.29□□□□□ -0.28
VARS2-209ENST00000477288 YPEL4Q96NS1 127 aa13.29□□□□□ -0.28
VARS2-209ENST00000477288 TLN2Q9Y4G6 2542 aa13.29□□□□□ -0.28
VARS2-209ENST00000477288 JMJD1CQ15652 2540 aa13.29□□□□□ -0.28
VARS2-209ENST00000477288 SBSPONQ8IVN8 264 aa13.29□□□□□ -0.28
VARS2-209ENST00000477288 USP9XQ93008 2570 aaPredicted RBP13.29□□□□□ -0.28
VARS2-209ENST00000477288 CENPFP49454 3210 aa13.28□□□□□ -0.28
VARS2-209ENST00000477288 A0A087WSZ3 146 aa13.28□□□□□ -0.28
VARS2-209ENST00000477288 C16orf95Q9H693 158 aa13.28□□□□□ -0.28
VARS2-209ENST00000477288 LINC00575Q6W349 94 aa13.28□□□□□ -0.28
VARS2-209ENST00000477288 H0Y9P7 68 aa13.26□□□□□ -0.29
VARS2-209ENST00000477288 PSPHP1O15172 72 aa13.26□□□□□ -0.29
VARS2-209ENST00000477288 ARHGAP32A7KAX9 2087 aa13.25□□□□□ -0.29
VARS2-209ENST00000477288 TRBV7-7A0A0K0K1E9 115 aa13.25□□□□□ -0.29
VARS2-209ENST00000477288 ZFYVE26Q68DK2 2539 aa13.25□□□□□ -0.29
VARS2-209ENST00000477288 C2orf48Q96LS8 159 aa13.24□□□□□ -0.29
VARS2-209ENST00000477288 ABCA12Q86UK0 2595 aa13.24□□□□□ -0.29
VARS2-209ENST00000477288 TSPEAR-AS2P59090 65 aa13.23□□□□□ -0.29
VARS2-209ENST00000477288 CNFNQ9BYD5 112 aa13.23□□□□□ -0.29
VARS2-209ENST00000477288 HCFC1P51610 2035 aa13.23□□□□□ -0.29
VARS2-209ENST00000477288 Q8N3U1 123 aa13.23□□□□□ -0.29
VARS2-209ENST00000477288 DOPEY1Q5JWR5 2465 aa13.22□□□□□ -0.29
VARS2-209ENST00000477288 USP9YO00507 2555 aaPredicted RBP13.22□□□□□ -0.29
VARS2-209ENST00000477288 ADAMTSL4-AS1Q5T5F5 129 aa13.21□□□□□ -0.29
VARS2-209ENST00000477288 LYPD5Q6UWN5 251 aa13.21□□□□□ -0.29
VARS2-209ENST00000477288 ZNF580Q9UK33 172 aa13.21□□□□□ -0.29
VARS2-209ENST00000477288 CRYGAP11844 174 aa13.21□□□□□ -0.29
VARS2-209ENST00000477288 HCG22E2RYF7 251 aa13.21□□□□□ -0.3
VARS2-209ENST00000477288 PRLHP81277 87 aa13.2□□□□□ -0.3
VARS2-209ENST00000477288 A8MTW9 85 aa13.19□□□□□ -0.3
VARS2-209ENST00000477288 SPTBN4Q9H254 2564 aa13.19□□□□□ -0.3
VARS2-209ENST00000477288 A0A1W2PPR1 153 aa13.18□□□□□ -0.3
VARS2-209ENST00000477288 Q6ZSN1 163 aa13.17□□□□□ -0.3
VARS2-209ENST00000477288 CHD8Q9HCK8 2581 aa13.17□□□□□ -0.3
VARS2-209ENST00000477288 IGKV2D-30A0A075B6S6 120 aa13.16□□□□□ -0.3
VARS2-209ENST00000477288 IGKV2-30P06310 120 aa13.16□□□□□ -0.3
VARS2-209ENST00000477288 LIMD2Q9BT23 127 aa13.15□□□□□ -0.3
VARS2-209ENST00000477288 SETD2Q9BYW2 2564 aaPredicted RBP13.15□□□□□ -0.3
VARS2-209ENST00000477288 LINC00337Q8N6G1 96 aa13.15□□□□□ -0.3
VARS2-209ENST00000477288 GOLGB1Q14789 3259 aaKnown RBP13.15□□□□□ -0.3
VARS2-209ENST00000477288 Q6ZRU5 148 aa13.14□□□□□ -0.31
VARS2-209ENST00000477288 NHLRC4P0CG21 123 aaPredicted RBP13.14□□□□□ -0.31
VARS2-209ENST00000477288 F8WDY8 70 aa13.13□□□□□ -0.31
VARS2-209ENST00000477288 URB1-AS1Q96HZ7 61 aa13.13□□□□□ -0.31
VARS2-209ENST00000477288 C7orf65Q6ZTY9 151 aa13.12□□□□□ -0.31
VARS2-209ENST00000477288 Q9UF83 564 aa13.11□□□□□ -0.31
VARS2-209ENST00000477288 CSDC2Q9Y534 153 aaKnown RBP13.11□□□□□ -0.31
VARS2-209ENST00000477288 COL5A1P20908 1838 aaPredicted RBP13.11□□□□□ -0.31
VARS2-209ENST00000477288 FHL3Q13643 280 aa13.11□□□□□ -0.31
VARS2-209ENST00000477288 AMELXQ99217 191 aa13.11□□□□□ -0.31
VARS2-209ENST00000477288 RAI1Q7Z5J4 1906 aaPredicted RBP13.11□□□□□ -0.31
VARS2-209ENST00000477288 SMCR5Q8TEV8 140 aa13.11□□□□□ -0.31
VARS2-209ENST00000477288 A0A1B0GUV1 79 aa13.09□□□□□ -0.31
VARS2-209ENST00000477288 FN1P02751 2386 aaKnown RBP13.08□□□□□ -0.31
VARS2-209ENST00000477288 C22orf24Q9Y442 160 aa13.08□□□□□ -0.31
VARS2-209ENST00000477288 EXPH5Q8NEV8 1989 aa13.07□□□□□ -0.32
VARS2-209ENST00000477288 SPACA4Q8TDM5 124 aa13.07□□□□□ -0.32
VARS2-209ENST00000477288 MDFIQ99750 246 aa13.07□□□□□ -0.32
VARS2-209ENST00000477288 ATG2AQ2TAZ0 1938 aa13.07□□□□□ -0.32
VARS2-209ENST00000477288 C1orf64Q8NEQ6 169 aa13.07□□□□□ -0.32
VARS2-209ENST00000477288 LINC00310P59036 64 aa13.06□□□□□ -0.32
VARS2-209ENST00000477288 TMEM254Q8TBM7 123 aa13.06□□□□□ -0.32
VARS2-209ENST00000477288 PLA2G1BP04054 148 aaKnown RBP13.04□□□□□ -0.32
VARS2-209ENST00000477288 LINC00846Q9NV44 126 aa13.02□□□□□ -0.32
VARS2-209ENST00000477288 Q8N2B8 174 aa13.02□□□□□ -0.32
VARS2-209ENST00000477288 hDV103S1A0JD37 113 aa13.01□□□□□ -0.33
VARS2-209ENST00000477288 LRRK2Q5S007 2527 aa13.01□□□□□ -0.33
VARS2-209ENST00000477288 KIAA0087Q14695 138 aa13.01□□□□□ -0.33
VARS2-209ENST00000477288 SMIM29Q86T20 159 aa13□□□□□ -0.33
VARS2-209ENST00000477288 MOBPQ13875 183 aa12.99□□□□□ -0.33
VARS2-209ENST00000477288 LINC01561Q8N1V8 128 aa12.98□□□□□ -0.33
VARS2-209ENST00000477288 A0A1B0GU69 56 aa12.97□□□□□ -0.33
VARS2-209ENST00000477288 ZNF462Q96JM2 2506 aa12.97□□□□□ -0.33
VARS2-209ENST00000477288 FASNP49327 2511 aaKnown RBP12.95□□□□□ -0.34
VARS2-209ENST00000477288 COX8CQ7Z4L0 72 aa12.93□□□□□ -0.34
VARS2-209ENST00000477288 A0A096LNJ9 63 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms