RNA–Protein interactions for RNA: ENST00000476983.5

CLK2-205, Transcript of CDC like kinase 2, humanhuman

TSL 1 (best)

Gene CLK2, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-205ENST00000476983 ALMS1Q8TCU4 4167 aa13.1□□□□□ -0.31
CLK2-205ENST00000476983 PSCAO43653 123 aa13.1□□□□□ -0.31
CLK2-205ENST00000476983 HINT1P49773 126 aaPredicted RBP13.1□□□□□ -0.31
CLK2-205ENST00000476983 HERV-K104P63124 156 aa13.1□□□□□ -0.31
CLK2-205ENST00000476983 USP17L23D6RBM5 183 aa13.09□□□□□ -0.31
CLK2-205ENST00000476983 ZNF561-AS1K7EIQ3 104 aa13.09□□□□□ -0.31
CLK2-205ENST00000476983 HIST1H4GQ99525 98 aa13.09□□□□□ -0.31
CLK2-205ENST00000476983 DNAH10Q8IVF4 4471 aa13.08□□□□□ -0.31
CLK2-205ENST00000476983 CXCL5P42830 114 aa13.08□□□□□ -0.32
CLK2-205ENST00000476983 HSD52Q0P140 79 aa13.08□□□□□ -0.32
CLK2-205ENST00000476983 BATFQ16520 125 aa13.08□□□□□ -0.32
CLK2-205ENST00000476983 C10orf25Q5T742 122 aa13.08□□□□□ -0.32
CLK2-205ENST00000476983 UNQ6190/PRO20217Q6UXQ8 127 aa13.08□□□□□ -0.32
CLK2-205ENST00000476983 LITAFQ99732 161 aa13.08□□□□□ -0.32
CLK2-205ENST00000476983 KMT2AQ03164 3969 aa13.07□□□□□ -0.32
CLK2-205ENST00000476983 SMIM13P0DJ93 91 aa13.07□□□□□ -0.32
CLK2-205ENST00000476983 SRSF9Q13242 221 aaKnown RBP eCLIP13.07□□□□□ -0.32
CLK2-205ENST00000476983 ADAMTSL4-AS1Q5T5F5 129 aa13.07□□□□□ -0.32
CLK2-205ENST00000476983 DAND5Q8N907 189 aa13.07□□□□□ -0.32
CLK2-205ENST00000476983 NTN5Q8WTR8 489 aaPredicted RBP13.07□□□□□ -0.32
CLK2-205ENST00000476983 TMEM238C9JI98 176 aa13.06□□□□□ -0.32
CLK2-205ENST00000476983 GVQW2A0A096LPI5 108 aaPredicted RBP13.06□□□□□ -0.32
CLK2-205ENST00000476983 WFDC2Q14508 124 aa13.06□□□□□ -0.32
CLK2-205ENST00000476983 Q6ZR54 194 aa13.06□□□□□ -0.32
CLK2-205ENST00000476983 GCSHP23434 173 aa13.05□□□□□ -0.32
CLK2-205ENST00000476983 PFN2P35080 140 aa13.05□□□□□ -0.32
CLK2-205ENST00000476983 NPC2P61916 151 aa13.05□□□□□ -0.32
CLK2-205ENST00000476983 SFTA2Q6UW10 78 aa13.05□□□□□ -0.32
CLK2-205ENST00000476983 CAMK2N2Q96S95 79 aa13.05□□□□□ -0.32
CLK2-205ENST00000476983 SPANXB1Q9NS25 103 aaPredicted RBP13.05□□□□□ -0.32
CLK2-205ENST00000476983 EREGO14944 169 aa13.04□□□□□ -0.32
CLK2-205ENST00000476983 C9orf116Q5BN46 136 aaPredicted RBP13.04□□□□□ -0.32
CLK2-205ENST00000476983 CIRBPQ14011 172 aaKnown RBP13.04□□□□□ -0.32
CLK2-205ENST00000476983 ERG28Q9UKR5 140 aa13.04□□□□□ -0.32
CLK2-205ENST00000476983 TIMM17BO60830 172 aa13.03□□□□□ -0.32
CLK2-205ENST00000476983 BVES-AS1Q5T3Y7 98 aa13.03□□□□□ -0.32
CLK2-205ENST00000476983 Q6ZRN7 208 aaPredicted RBP13.03□□□□□ -0.32
CLK2-205ENST00000476983 SNHG12Q9BXW3 62 aa13.03□□□□□ -0.32
CLK2-205ENST00000476983 LINC00158P58513 81 aa13.02□□□□□ -0.32
CLK2-205ENST00000476983 CEND1Q8N111 149 aa13.02□□□□□ -0.32
CLK2-205ENST00000476983 M0R143 59 aa13.02□□□□□ -0.33
CLK2-205ENST00000476983 TAL2Q16559 108 aa13.02□□□□□ -0.33
CLK2-205ENST00000476983 Q6ZRU5 148 aa13.02□□□□□ -0.33
CLK2-205ENST00000476983 DNAH6Q9C0G6 4158 aa13.01□□□□□ -0.33
CLK2-205ENST00000476983 FXYD2P54710 66 aa13.01□□□□□ -0.33
CLK2-205ENST00000476983 C2orf48Q96LS8 159 aa13.01□□□□□ -0.33
CLK2-205ENST00000476983 SPANXDQ9BXN6 97 aa13.01□□□□□ -0.33
CLK2-205ENST00000476983 SPANXCQ9NY87 97 aa13.01□□□□□ -0.33
CLK2-205ENST00000476983 C6orf48Q9UBA6 75 aa13.01□□□□□ -0.33
CLK2-205ENST00000476983 MUSTN1Q8IVN3 82 aa12.99□□□□□ -0.33
CLK2-205ENST00000476983 MIR7-3HGQ8N6C7 128 aa12.99□□□□□ -0.33
CLK2-205ENST00000476983 EIF4EBP3O60516 100 aaPredicted RBP12.97□□□□□ -0.33
CLK2-205ENST00000476983 PTTG1IPP53801 180 aa12.97□□□□□ -0.33
CLK2-205ENST00000476983 SYCNQ0VAF6 134 aa12.97□□□□□ -0.33
CLK2-205ENST00000476983 SLPIP03973 132 aa12.97□□□□□ -0.33
CLK2-205ENST00000476983 C1orf134Q5TEV5 83 aa12.96□□□□□ -0.33
CLK2-205ENST00000476983 TRBV30A0A0K0K1B3 111 aa12.95□□□□□ -0.34
CLK2-205ENST00000476983 LRCOL1A6NCL2 159 aa12.95□□□□□ -0.34
CLK2-205ENST00000476983 LINC00308Q8TCZ7 52 aa12.95□□□□□ -0.34
CLK2-205ENST00000476983 CARD19Q96LW7 228 aa12.95□□□□□ -0.34
CLK2-205ENST00000476983 SOSTDC1Q6X4U4 206 aa12.95□□□□□ -0.34
CLK2-205ENST00000476983 Q6ZVH6 145 aa12.95□□□□□ -0.34
CLK2-205ENST00000476983 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.93□□□□□ -0.34
CLK2-205ENST00000476983 F8WDY8 70 aa12.93□□□□□ -0.34
CLK2-205ENST00000476983 HYDINQ4G0P3 5121 aa12.93□□□□□ -0.34
CLK2-205ENST00000476983 COX17Q14061 63 aa12.93□□□□□ -0.34
CLK2-205ENST00000476983 NHP2Q9NX24 153 aaKnown RBP12.92□□□□□ -0.34
CLK2-205ENST00000476983 DNAH2Q9P225 4427 aa12.92□□□□□ -0.34
CLK2-205ENST00000476983 A4D1N5 150 aa12.91□□□□□ -0.34
CLK2-205ENST00000476983 IFITM1P13164 125 aa12.91□□□□□ -0.34
CLK2-205ENST00000476983 RPL24P83731 157 aaKnown RBP12.91□□□□□ -0.34
CLK2-205ENST00000476983 C14orf177Q52M58 125 aa12.91□□□□□ -0.34
CLK2-205ENST00000476983 K7ERJ3 54 aa12.9□□□□□ -0.34
CLK2-205ENST00000476983 TMEM238LA0A1B0GVL6 79 aa12.89□□□□□ -0.35
CLK2-205ENST00000476983 A6NJY4 79 aa12.89□□□□□ -0.35
CLK2-205ENST00000476983 A0A087WTM6 91 aa12.88□□□□□ -0.35
CLK2-205ENST00000476983 A6NDN8 102 aa12.88□□□□□ -0.35
CLK2-205ENST00000476983 SND1-IT1Q9HBX3 110 aa12.88□□□□□ -0.35
CLK2-205ENST00000476983 LCE6AA0A183 80 aa12.87□□□□□ -0.35
CLK2-205ENST00000476983 COPS9Q8WXC6 57 aa12.87□□□□□ -0.35
CLK2-205ENST00000476983 NDUFC2-KCTD14E9PQ53 114 aa12.86□□□□□ -0.35
CLK2-205ENST00000476983 RPL18AQ02543 176 aaKnown RBP12.86□□□□□ -0.35
CLK2-205ENST00000476983 GAGE2EQ4V326 116 aa12.86□□□□□ -0.35
CLK2-205ENST00000476983 Q8N814 137 aa12.86□□□□□ -0.35
CLK2-205ENST00000476983 XAGE1AQ9HD64 81 aa12.86□□□□□ -0.35
CLK2-205ENST00000476983 GAGE2DQ9UEU5 116 aa12.86□□□□□ -0.35
CLK2-205ENST00000476983 RNF151Q2KHN1 245 aa12.85□□□□□ -0.35
CLK2-205ENST00000476983 COL5A1-AS1Q5SY13 56 aa12.85□□□□□ -0.35
CLK2-205ENST00000476983 Q6ZRP5 223 aa12.85□□□□□ -0.35
CLK2-205ENST00000476983 CFC1BP0CG36 223 aa12.85□□□□□ -0.35
CLK2-205ENST00000476983 CFC1P0CG37 223 aa12.85□□□□□ -0.35
CLK2-205ENST00000476983 CNBPP62633 177 aaKnown RBP12.85□□□□□ -0.35
CLK2-205ENST00000476983 RAB37Q96AX2 223 aa12.85□□□□□ -0.35
CLK2-205ENST00000476983 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.84□□□□□ -0.35
CLK2-205ENST00000476983 SACSQ9NZJ4 4579 aa12.84□□□□□ -0.35
CLK2-205ENST00000476983 RTL8CO15255 209 aa12.82□□□□□ -0.36
CLK2-205ENST00000476983 TNP2Q05952 138 aa12.82□□□□□ -0.36
CLK2-205ENST00000476983 FUSP35637 526 aaKnown RBP eCLIP12.82□□□□□ -0.36
CLK2-205ENST00000476983 FRAS1Q86XX4 4008 aa12.81□□□□□ -0.36
CLK2-205ENST00000476983 A0A1B0GWB2 263 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 207.5 ms