RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 PRELID3AQ96N28 172 aa4.28□□□□□ -1.72
PRPF3-205ENST00000476970 SMIM2Q9BVW6 85 aa4.28□□□□□ -1.72
PRPF3-205ENST00000476970 CSDC2Q9Y534 153 aaKnown RBP4.28□□□□□ -1.72
PRPF3-205ENST00000476970 A0A087X002 238 aa4.27□□□□□ -1.73
PRPF3-205ENST00000476970 M0QXV9 152 aa4.27□□□□□ -1.73
PRPF3-205ENST00000476970 TSHBP01222 138 aa4.27□□□□□ -1.73
PRPF3-205ENST00000476970 SEC61BP60468 96 aaKnown RBP4.27□□□□□ -1.73
PRPF3-205ENST00000476970 CTAG1AP78358 180 aa4.27□□□□□ -1.73
PRPF3-205ENST00000476970 KRTAP11-1Q8IUC1 163 aa4.27□□□□□ -1.73
PRPF3-205ENST00000476970 LINC00337Q8N6G1 96 aa4.27□□□□□ -1.73
PRPF3-205ENST00000476970 LINC00304Q8N9R0 145 aa4.27□□□□□ -1.73
PRPF3-205ENST00000476970 TIMM21Q9BVV7 248 aa4.27□□□□□ -1.73
PRPF3-205ENST00000476970 PPDPFQ9H3Y8 114 aa4.27□□□□□ -1.73
PRPF3-205ENST00000476970 MAP1LC3AQ9H492 121 aa4.27□□□□□ -1.73
PRPF3-205ENST00000476970 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.26□□□□□ -1.73
PRPF3-205ENST00000476970 IGKV2-29A2NJV5 120 aaPredicted RBP4.26□□□□□ -1.73
PRPF3-205ENST00000476970 PRSS47A8MTI9 375 aa4.26□□□□□ -1.73
PRPF3-205ENST00000476970 SMKR1H3BMG3 65 aa4.26□□□□□ -1.73
PRPF3-205ENST00000476970 COX7A2LO14548 114 aa4.26□□□□□ -1.73
PRPF3-205ENST00000476970 APOC3P02656 99 aa4.26□□□□□ -1.73
PRPF3-205ENST00000476970 ORMDL2Q53FV1 153 aa4.26□□□□□ -1.73
PRPF3-205ENST00000476970 GNB1LQ9BYB4 327 aa4.26□□□□□ -1.73
PRPF3-205ENST00000476970 KRTAP9-8Q9BYQ0 159 aa4.26□□□□□ -1.73
PRPF3-205ENST00000476970 NXT2Q9NPJ8 142 aaKnown RBP4.26□□□□□ -1.73
PRPF3-205ENST00000476970 RPS10P5Q9NQ39 176 aa4.26□□□□□ -1.73
PRPF3-205ENST00000476970 SPANXA1Q9NS26 97 aa4.26□□□□□ -1.73
PRPF3-205ENST00000476970 FAM168BA1KXE4 195 aa4.25□□□□□ -1.73
PRPF3-205ENST00000476970 NUPR1O60356 82 aa4.25□□□□□ -1.73
PRPF3-205ENST00000476970 NPYP01303 97 aa4.25□□□□□ -1.73
PRPF3-205ENST00000476970 NPSP0C0P6 89 aa4.25□□□□□ -1.73
PRPF3-205ENST00000476970 PAPPA-AS1Q5QFB9 102 aa4.25□□□□□ -1.73
PRPF3-205ENST00000476970 OPRPNQ99935 248 aaPredicted RBP4.25□□□□□ -1.73
PRPF3-205ENST00000476970 C9orf118A6NHY6 69 aa4.24□□□□□ -1.73
PRPF3-205ENST00000476970 C1orf196B1AJZ1 125 aa4.24□□□□□ -1.73
PRPF3-205ENST00000476970 F8WDY8 70 aa4.24□□□□□ -1.73
PRPF3-205ENST00000476970 IFI27P40305 119 aaPredicted RBP4.24□□□□□ -1.73
PRPF3-205ENST00000476970 MRPS36P82909 103 aaKnown RBP4.24□□□□□ -1.73
PRPF3-205ENST00000476970 SPAG11BQ08648 103 aa4.24□□□□□ -1.73
PRPF3-205ENST00000476970 Q8N8P6 123 aa4.24□□□□□ -1.73
PRPF3-205ENST00000476970 CDC42SE2Q9NRR3 84 aa4.24□□□□□ -1.73
PRPF3-205ENST00000476970 MRPL35Q9NZE8 188 aaKnown RBP4.24□□□□□ -1.73
PRPF3-205ENST00000476970 CYSLTR1Q9Y271 337 aa4.24□□□□□ -1.73
PRPF3-205ENST00000476970 PYGO1Q9Y3Y4 419 aa4.24□□□□□ -1.73
PRPF3-205ENST00000476970 NDUFA1O15239 70 aa4.23□□□□□ -1.73
PRPF3-205ENST00000476970 TLX1NBP0CAT3 122 aa4.23□□□□□ -1.73
PRPF3-205ENST00000476970 RPL28P46779 137 aaKnown RBP4.23□□□□□ -1.73
PRPF3-205ENST00000476970 Q6ZN92 141 aa4.23□□□□□ -1.73
PRPF3-205ENST00000476970 FP248Q71RG6 208 aaPredicted RBP4.23□□□□□ -1.73
PRPF3-205ENST00000476970 OR10D4PQ8NGN7 298 aa4.23□□□□□ -1.73
PRPF3-205ENST00000476970 UBE2D4Q9Y2X8 147 aa4.23□□□□□ -1.73
PRPF3-205ENST00000476970 GAGE2EQ4V326 116 aa4.22□□□□□ -1.73
PRPF3-205ENST00000476970 C2orf88Q9BSF0 95 aa4.22□□□□□ -1.73
PRPF3-205ENST00000476970 GAGE2DQ9UEU5 116 aa4.22□□□□□ -1.73
PRPF3-205ENST00000476970 IFITM10A6NMD0 228 aa4.21□□□□□ -1.74
PRPF3-205ENST00000476970 RAB5BP61020 215 aa4.21□□□□□ -1.74
PRPF3-205ENST00000476970 SEC11AP67812 179 aa4.21□□□□□ -1.74
PRPF3-205ENST00000476970 MT1HP80294 61 aa4.21□□□□□ -1.74
PRPF3-205ENST00000476970 FABP9Q0Z7S8 132 aa4.21□□□□□ -1.74
PRPF3-205ENST00000476970 FAM229BQ4G0N7 80 aa4.21□□□□□ -1.74
PRPF3-205ENST00000476970 FA2HQ7L5A8 372 aa4.21□□□□□ -1.74
PRPF3-205ENST00000476970 TMEM141Q96I45 108 aa4.21□□□□□ -1.74
PRPF3-205ENST00000476970 TIMM17AQ99595 171 aa4.21□□□□□ -1.74
PRPF3-205ENST00000476970 KRTAP4-1Q9BYQ7 146 aa4.21□□□□□ -1.74
PRPF3-205ENST00000476970 SMCO4Q9NRQ5 59 aa4.21□□□□□ -1.74
PRPF3-205ENST00000476970 TGIF2-C20orf24A0A0A6YYL0 155 aa4.2□□□□□ -1.74
PRPF3-205ENST00000476970 LOC389332A0A1B0GUA5 103 aa4.2□□□□□ -1.74
PRPF3-205ENST00000476970 KRTAP13-2Q52LG2 175 aa4.2□□□□□ -1.74
PRPF3-205ENST00000476970 C2orf66Q6UXQ4 117 aa4.2□□□□□ -1.74
PRPF3-205ENST00000476970 TEX43Q6ZNM6 134 aa4.2□□□□□ -1.74
PRPF3-205ENST00000476970 Q6ZUT4 128 aa4.2□□□□□ -1.74
PRPF3-205ENST00000476970 ALKBH7Q9BT30 221 aaPredicted RBP4.2□□□□□ -1.74
PRPF3-205ENST00000476970 TRAPPC1Q9Y5R8 145 aa4.2□□□□□ -1.74
PRPF3-205ENST00000476970 IGKV2D-26A0A0A0MRZ7 120 aa4.19□□□□□ -1.74
PRPF3-205ENST00000476970 TRAV13-1A0A0B4J241 112 aa4.19□□□□□ -1.74
PRPF3-205ENST00000476970 LINC01546A6NGU7 62 aa4.19□□□□□ -1.74
PRPF3-205ENST00000476970 KRTAP10-6P60371 365 aaPredicted RBP4.19□□□□□ -1.74
PRPF3-205ENST00000476970 RPL39P62891 51 aaKnown RBP4.19□□□□□ -1.74
PRPF3-205ENST00000476970 KRTAP13-3Q3SY46 172 aa4.19□□□□□ -1.74
PRPF3-205ENST00000476970 LBHQ53QV2 105 aaPredicted RBP4.19□□□□□ -1.74
PRPF3-205ENST00000476970 C5orf38Q86SI9 138 aa4.19□□□□□ -1.74
PRPF3-205ENST00000476970 LINC01561Q8N1V8 128 aa4.19□□□□□ -1.74
PRPF3-205ENST00000476970 ORAOV1Q8WV07 137 aa4.19□□□□□ -1.74
PRPF3-205ENST00000476970 VCX2Q9H322 139 aa4.19□□□□□ -1.74
PRPF3-205ENST00000476970 BCE1O60756 84 aa4.18□□□□□ -1.74
PRPF3-205ENST00000476970 KIAA1644Q3SXP7 199 aa4.18□□□□□ -1.74
PRPF3-205ENST00000476970 ERASQ7Z444 233 aa4.18□□□□□ -1.74
PRPF3-205ENST00000476970 KRTAP7-1Q8IUC3 87 aa4.18□□□□□ -1.74
PRPF3-205ENST00000476970 TOMM6Q96B49 74 aa4.18□□□□□ -1.74
PRPF3-205ENST00000476970 C6orf48Q9UBA6 75 aa4.18□□□□□ -1.74
PRPF3-205ENST00000476970 SSPOA2VEC9 5147 aa4.17□□□□□ -1.74
PRPF3-205ENST00000476970 IGLV4-3A0A075B6K6 122 aa4.17□□□□□ -1.74
PRPF3-205ENST00000476970 NDUFC2-KCTD14E9PQ53 114 aa4.17□□□□□ -1.74
PRPF3-205ENST00000476970 HERVK_113P63121 156 aa4.17□□□□□ -1.74
PRPF3-205ENST00000476970 LINC00242Q5T6M2 205 aa4.17□□□□□ -1.74
PRPF3-205ENST00000476970 SCGB3A1Q96QR1 104 aa4.17□□□□□ -1.74
PRPF3-205ENST00000476970 IGHV3OR16-9A0A0B4J2B5 98 aa4.16□□□□□ -1.74
PRPF3-205ENST00000476970 TRBV30A0A0K0K1B3 111 aa4.16□□□□□ -1.74
PRPF3-205ENST00000476970 IGIPA6NJ69 53 aa4.16□□□□□ -1.74
PRPF3-205ENST00000476970 M0R2T5 61 aa4.16□□□□□ -1.74
PRPF3-205ENST00000476970 HBDP02042 147 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms