RNA–Protein interactions for RNA: ENST00000475627.1

HLA-DMA-207, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 984 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-207ENST00000475627 UQCR10Q9UDW1 63 aa5.49□□□□□ -1.53
HLA-DMA-207ENST00000475627 TINCRA0A1B0GVN0 87 aa5.48□□□□□ -1.53
HLA-DMA-207ENST00000475627 F8VRH5 84 aa5.48□□□□□ -1.53
HLA-DMA-207ENST00000475627 COX7A2LO14548 114 aa5.48□□□□□ -1.53
HLA-DMA-207ENST00000475627 XCL1P47992 114 aa5.48□□□□□ -1.53
HLA-DMA-207ENST00000475627 UBE2D1P51668 147 aa5.48□□□□□ -1.53
HLA-DMA-207ENST00000475627 KRTDAPP60985 99 aa5.48□□□□□ -1.53
HLA-DMA-207ENST00000475627 VAMP3Q15836 100 aa5.48□□□□□ -1.53
HLA-DMA-207ENST00000475627 ENHOQ6UWT2 76 aa5.48□□□□□ -1.53
HLA-DMA-207ENST00000475627 STPG4Q8N801 248 aa5.48□□□□□ -1.53
HLA-DMA-207ENST00000475627 MPLKIPQ8TAP9 179 aa5.48□□□□□ -1.53
HLA-DMA-207ENST00000475627 IGLV10-54A0A075B6I4 117 aa5.47□□□□□ -1.53
HLA-DMA-207ENST00000475627 IGLV5-52A0A0A0MRZ9 124 aa5.47□□□□□ -1.53
HLA-DMA-207ENST00000475627 SYS1-DBNDD2H3BUS1 97 aa5.47□□□□□ -1.53
HLA-DMA-207ENST00000475627 HERVK_113P61574 105 aa5.47□□□□□ -1.53
HLA-DMA-207ENST00000475627 RNASE13Q5GAN3 156 aaKnown RBP5.47□□□□□ -1.53
HLA-DMA-207ENST00000475627 LINC00336Q6ZUF6 198 aa5.47□□□□□ -1.53
HLA-DMA-207ENST00000475627 FAM19A3Q7Z5A8 133 aa5.47□□□□□ -1.53
HLA-DMA-207ENST00000475627 SPATA12Q7Z6I5 190 aa5.47□□□□□ -1.53
HLA-DMA-207ENST00000475627 LINC01561Q8N1V8 128 aa5.47□□□□□ -1.53
HLA-DMA-207ENST00000475627 ORAOV1Q8WV07 137 aa5.47□□□□□ -1.53
HLA-DMA-207ENST00000475627 CHAC1Q9BUX1 264 aa5.47□□□□□ -1.53
HLA-DMA-207ENST00000475627 PLECQ15149 4684 aaKnown RBP5.46□□□□□ -1.53
HLA-DMA-207ENST00000475627 IGLV9-49A0A0B4J1Y8 123 aa5.46□□□□□ -1.54
HLA-DMA-207ENST00000475627 DPM2O94777 84 aa5.46□□□□□ -1.54
HLA-DMA-207ENST00000475627 OPRPNQ99935 248 aaPredicted RBP5.46□□□□□ -1.54
HLA-DMA-207ENST00000475627 PKIGQ9Y2B9 76 aa5.46□□□□□ -1.54
HLA-DMA-207ENST00000475627 IGHV1-58A0A0C4DH39 117 aa5.45□□□□□ -1.54
HLA-DMA-207ENST00000475627 PRSS2P07478 247 aa5.45□□□□□ -1.54
HLA-DMA-207ENST00000475627 HNRNPA3P51991 378 aaKnown RBP5.45□□□□□ -1.54
HLA-DMA-207ENST00000475627 BATFQ16520 125 aa5.45□□□□□ -1.54
HLA-DMA-207ENST00000475627 LINC00242Q5T6M2 205 aa5.45□□□□□ -1.54
HLA-DMA-207ENST00000475627 SFTA2Q6UW10 78 aa5.45□□□□□ -1.54
HLA-DMA-207ENST00000475627 LINC00173Q6ZV60 143 aa5.45□□□□□ -1.54
HLA-DMA-207ENST00000475627 KRTAP1-5Q9BYS1 174 aa5.45□□□□□ -1.54
HLA-DMA-207ENST00000475627 ALMS1Q8TCU4 4167 aa5.45□□□□□ -1.54
HLA-DMA-207ENST00000475627 A0A0J9YXV3 536 aa5.44□□□□□ -1.54
HLA-DMA-207ENST00000475627 IGKCP01834 107 aa5.44□□□□□ -1.54
HLA-DMA-207ENST00000475627 TMEM170BQ5T4T1 132 aa5.44□□□□□ -1.54
HLA-DMA-207ENST00000475627 C10orf25Q5T742 122 aa5.44□□□□□ -1.54
HLA-DMA-207ENST00000475627 MRPL35Q9NZE8 188 aaKnown RBP5.44□□□□□ -1.54
HLA-DMA-207ENST00000475627 IGLV5-45A0A087WSX0 123 aa5.43□□□□□ -1.54
HLA-DMA-207ENST00000475627 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.43□□□□□ -1.54
HLA-DMA-207ENST00000475627 IGHV3OR16-9A0A0B4J2B5 98 aa5.43□□□□□ -1.54
HLA-DMA-207ENST00000475627 C11orf86A6NJI1 115 aa5.43□□□□□ -1.54
HLA-DMA-207ENST00000475627 TSPAN13O95857 204 aa5.43□□□□□ -1.54
HLA-DMA-207ENST00000475627 CXCL5P42830 114 aa5.43□□□□□ -1.54
HLA-DMA-207ENST00000475627 LINC01545Q5VT33 79 aa5.43□□□□□ -1.54
HLA-DMA-207ENST00000475627 FAM104AQ969W3 186 aa5.43□□□□□ -1.54
HLA-DMA-207ENST00000475627 IGLV4-69A0A075B6H9 119 aa5.42□□□□□ -1.54
HLA-DMA-207ENST00000475627 C5orf38Q86SI9 138 aa5.42□□□□□ -1.54
HLA-DMA-207ENST00000475627 IGLV5-37A0A075B6J1 123 aa5.41□□□□□ -1.54
HLA-DMA-207ENST00000475627 IGHV3-64A0A075B6Q5 118 aa5.41□□□□□ -1.54
HLA-DMA-207ENST00000475627 GVQW2A0A096LPI5 108 aaPredicted RBP5.41□□□□□ -1.54
HLA-DMA-207ENST00000475627 ZNF22P17026 224 aaPredicted RBP5.41□□□□□ -1.54
HLA-DMA-207ENST00000475627 HINT1P49773 126 aaPredicted RBP5.41□□□□□ -1.54
HLA-DMA-207ENST00000475627 CKS1BP61024 79 aa5.41□□□□□ -1.54
HLA-DMA-207ENST00000475627 SPAG11BQ08648 103 aa5.41□□□□□ -1.54
HLA-DMA-207ENST00000475627 ZC2HC1BQ5TFG8 222 aa5.41□□□□□ -1.54
HLA-DMA-207ENST00000475627 Q6ZRN7 208 aaPredicted RBP5.41□□□□□ -1.54
HLA-DMA-207ENST00000475627 ATOH7Q8N100 152 aa5.41□□□□□ -1.54
HLA-DMA-207ENST00000475627 NTN5Q8WTR8 489 aaPredicted RBP5.41□□□□□ -1.54
HLA-DMA-207ENST00000475627 CDKN2A-AS1Q9UH64 79 aa5.41□□□□□ -1.54
HLA-DMA-207ENST00000475627 IGLV5-39A0A0G2JS06 123 aa5.4□□□□□ -1.54
HLA-DMA-207ENST00000475627 Q6ZVH6 145 aa5.4□□□□□ -1.54
HLA-DMA-207ENST00000475627 Q8IZM0 81 aa5.4□□□□□ -1.54
HLA-DMA-207ENST00000475627 PLEKHB2Q96CS7 222 aa5.4□□□□□ -1.54
HLA-DMA-207ENST00000475627 C2orf48Q96LS8 159 aa5.4□□□□□ -1.54
HLA-DMA-207ENST00000475627 LYSTQ99698 3801 aa5.4□□□□□ -1.54
HLA-DMA-207ENST00000475627 VPS13DQ5THJ4 4388 aa5.39□□□□□ -1.55
HLA-DMA-207ENST00000475627 A0A087WTM6 91 aa5.39□□□□□ -1.55
HLA-DMA-207ENST00000475627 SMIM1B2RUZ4 78 aa5.39□□□□□ -1.55
HLA-DMA-207ENST00000475627 TAX1BP3O14907 124 aa5.39□□□□□ -1.55
HLA-DMA-207ENST00000475627 NDUFA1O15239 70 aa5.39□□□□□ -1.55
HLA-DMA-207ENST00000475627 C5orf47Q569G3 176 aa5.39□□□□□ -1.55
HLA-DMA-207ENST00000475627 KRTAP26-1Q6PEX3 210 aa5.39□□□□□ -1.55
HLA-DMA-207ENST00000475627 Q8N814 137 aa5.39□□□□□ -1.55
HLA-DMA-207ENST00000475627 TOMM7Q9P0U1 55 aa5.39□□□□□ -1.55
HLA-DMA-207ENST00000475627 TMEM223A0PJW6 202 aa5.38□□□□□ -1.55
HLA-DMA-207ENST00000475627 RTL8CO15255 209 aa5.38□□□□□ -1.55
HLA-DMA-207ENST00000475627 SPINK8P0C7L1 97 aa5.38□□□□□ -1.55
HLA-DMA-207ENST00000475627 LGALS3P17931 250 aaKnown RBP5.38□□□□□ -1.55
HLA-DMA-207ENST00000475627 NMUP48645 174 aa5.38□□□□□ -1.55
HLA-DMA-207ENST00000475627 XGP55808 180 aa5.38□□□□□ -1.55
HLA-DMA-207ENST00000475627 COX6A2Q02221 97 aa5.38□□□□□ -1.55
HLA-DMA-207ENST00000475627 BVES-AS1Q5T3Y7 98 aa5.38□□□□□ -1.55
HLA-DMA-207ENST00000475627 COX7B2Q8TF08 81 aa5.38□□□□□ -1.55
HLA-DMA-207ENST00000475627 CAMK2N2Q96S95 79 aa5.38□□□□□ -1.55
HLA-DMA-207ENST00000475627 PMCHL2Q9BQD1 86 aa5.38□□□□□ -1.55
HLA-DMA-207ENST00000475627 KRTAP3-1Q9BYR8 98 aa5.38□□□□□ -1.55
HLA-DMA-207ENST00000475627 LRCOL1A6NCL2 159 aa5.37□□□□□ -1.55
HLA-DMA-207ENST00000475627 E9PLD3 99 aa5.37□□□□□ -1.55
HLA-DMA-207ENST00000475627 LECT2O14960 151 aa5.37□□□□□ -1.55
HLA-DMA-207ENST00000475627 CNBPP62633 177 aaKnown RBP5.37□□□□□ -1.55
HLA-DMA-207ENST00000475627 HIGD2BQ4VC39 106 aa5.37□□□□□ -1.55
HLA-DMA-207ENST00000475627 C15orf56Q8N910 161 aa5.37□□□□□ -1.55
HLA-DMA-207ENST00000475627 CARD19Q96LW7 228 aa5.37□□□□□ -1.55
HLA-DMA-207ENST00000475627 DNAH1Q9P2D7 4330 aa5.37□□□□□ -1.55
HLA-DMA-207ENST00000475627 TRBV30A0A0K0K1B3 111 aa5.36□□□□□ -1.55
HLA-DMA-207ENST00000475627 MYMXA0A1B0GTQ4 84 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms