RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 NUPR2A6NF83 97 aa7.9□□□□□ -1.14
VAPB-204ENST00000475243 IGLV5-52A0A0A0MRZ9 124 aa7.9□□□□□ -1.15
VAPB-204ENST00000475243 ESRGQ1W209 222 aa7.89□□□□□ -1.15
VAPB-204ENST00000475243 X6R8D5 127 aa7.89□□□□□ -1.15
VAPB-204ENST00000475243 TRBV10-3A0A0K0K1G6 114 aa7.89□□□□□ -1.15
VAPB-204ENST00000475243 REG3GQ6UW15 175 aa7.89□□□□□ -1.15
VAPB-204ENST00000475243 COL27A1Q8IZC6 1860 aaPredicted RBP7.89□□□□□ -1.15
VAPB-204ENST00000475243 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.89□□□□□ -1.15
VAPB-204ENST00000475243 DNAH12Q6ZR08 3092 aa7.89□□□□□ -1.15
VAPB-204ENST00000475243 CCDC179H3BU77 68 aa7.88□□□□□ -1.15
VAPB-204ENST00000475243 LINC01556Q5JQF7 62 aa7.87□□□□□ -1.15
VAPB-204ENST00000475243 NDUFC1O43677 76 aa7.87□□□□□ -1.15
VAPB-204ENST00000475243 DEFB116Q30KQ4 102 aa7.87□□□□□ -1.15
VAPB-204ENST00000475243 ANKRD11Q6UB99 2663 aaPredicted RBP7.87□□□□□ -1.15
VAPB-204ENST00000475243 ZNF580Q9UK33 172 aa7.87□□□□□ -1.15
VAPB-204ENST00000475243 A0A087WYN8 130 aa7.87□□□□□ -1.15
VAPB-204ENST00000475243 RPL28P46779 137 aaKnown RBP7.86□□□□□ -1.15
VAPB-204ENST00000475243 FHL2Q14192 279 aa7.86□□□□□ -1.15
VAPB-204ENST00000475243 NTM-AS1Q6ZSK4 140 aa7.86□□□□□ -1.15
VAPB-204ENST00000475243 IGLV1-51P01701 117 aa7.86□□□□□ -1.15
VAPB-204ENST00000475243 Q8N814 137 aa7.86□□□□□ -1.15
VAPB-204ENST00000475243 SMIM1B2RUZ4 78 aa7.86□□□□□ -1.15
VAPB-204ENST00000475243 C1orf137Q5JT78 98 aa7.86□□□□□ -1.15
VAPB-204ENST00000475243 IGHV6-1A0A0B4J1U7 121 aa7.86□□□□□ -1.15
VAPB-204ENST00000475243 CHCHD7Q9BUK0 85 aa7.86□□□□□ -1.15
VAPB-204ENST00000475243 CNFNQ9BYD5 112 aa7.86□□□□□ -1.15
VAPB-204ENST00000475243 Q6ZSN1 163 aa7.86□□□□□ -1.15
VAPB-204ENST00000475243 MRPL55Q7Z7F7 128 aaKnown RBP7.86□□□□□ -1.15
VAPB-204ENST00000475243 PKD1L2Q7Z442 2459 aa7.86□□□□□ -1.15
VAPB-204ENST00000475243 Q6Q795 121 aa7.85□□□□□ -1.15
VAPB-204ENST00000475243 A0A1W2PPR1 153 aa7.85□□□□□ -1.15
VAPB-204ENST00000475243 XGP55808 180 aa7.85□□□□□ -1.15
VAPB-204ENST00000475243 A8MTW9 85 aa7.85□□□□□ -1.15
VAPB-204ENST00000475243 SPTBN4Q9H254 2564 aa7.85□□□□□ -1.15
VAPB-204ENST00000475243 V9GYY9 64 aa7.85□□□□□ -1.15
VAPB-204ENST00000475243 TSPEAR-AS2P59090 65 aa7.84□□□□□ -1.15
VAPB-204ENST00000475243 LINC00208Q96KT6 92 aa7.84□□□□□ -1.15
VAPB-204ENST00000475243 ZNF462Q96JM2 2506 aa7.84□□□□□ -1.15
VAPB-204ENST00000475243 IMUPQ9GZP8 106 aa7.84□□□□□ -1.15
VAPB-204ENST00000475243 ADAMTSL4-AS1Q5T5F5 129 aa7.84□□□□□ -1.15
VAPB-204ENST00000475243 COX7CP15954 63 aa7.84□□□□□ -1.16
VAPB-204ENST00000475243 LINC01547P58512 204 aaPredicted RBP7.84□□□□□ -1.16
VAPB-204ENST00000475243 EGFEM1PQ0D2K5 195 aa7.83□□□□□ -1.16
VAPB-204ENST00000475243 URB1-AS1Q96HZ7 61 aa7.82□□□□□ -1.16
VAPB-204ENST00000475243 ATP5EP56381 51 aaPredicted RBP7.82□□□□□ -1.16
VAPB-204ENST00000475243 ANKRD17O75179 2603 aaKnown RBP7.82□□□□□ -1.16
VAPB-204ENST00000475243 Q9BRP9 147 aa7.81□□□□□ -1.16
VAPB-204ENST00000475243 A0A087WVE0 104 aa7.81□□□□□ -1.16
VAPB-204ENST00000475243 SOSTDC1Q6X4U4 206 aa7.81□□□□□ -1.16
VAPB-204ENST00000475243 LINC00575Q6W349 94 aa7.8□□□□□ -1.16
VAPB-204ENST00000475243 SPINK1P00995 79 aa7.8□□□□□ -1.16
VAPB-204ENST00000475243 PCOTHQ58A44 107 aa7.8□□□□□ -1.16
VAPB-204ENST00000475243 LINC00310P59036 64 aa7.8□□□□□ -1.16
VAPB-204ENST00000475243 USP9YO00507 2555 aaPredicted RBP7.8□□□□□ -1.16
VAPB-204ENST00000475243 TRBV7-6A0A0J9YX20 115 aa7.79□□□□□ -1.16
VAPB-204ENST00000475243 SBSPONQ8IVN8 264 aa7.79□□□□□ -1.16
VAPB-204ENST00000475243 LYPD5Q6UWN5 251 aa7.79□□□□□ -1.16
VAPB-204ENST00000475243 Q6JHZ5 121 aa7.79□□□□□ -1.16
VAPB-204ENST00000475243 PRLHP81277 87 aa7.78□□□□□ -1.16
VAPB-204ENST00000475243 C1orf134Q5TEV5 83 aa7.78□□□□□ -1.16
VAPB-204ENST00000475243 MUC7Q8TAX7 377 aa7.78□□□□□ -1.16
VAPB-204ENST00000475243 F8P00451 2351 aa7.77□□□□□ -1.17
VAPB-204ENST00000475243 TRAV7A0A075B6U4 112 aa7.77□□□□□ -1.17
VAPB-204ENST00000475243 A0A087WSZ3 146 aa7.77□□□□□ -1.17
VAPB-204ENST00000475243 C16orf95Q9H693 158 aa7.76□□□□□ -1.17
VAPB-204ENST00000475243 ACANP16112 2415 aa7.76□□□□□ -1.17
VAPB-204ENST00000475243 PRYO14603 147 aa7.76□□□□□ -1.17
VAPB-204ENST00000475243 AMELXQ99217 191 aa7.76□□□□□ -1.17
VAPB-204ENST00000475243 Q6ZRU5 148 aa7.75□□□□□ -1.17
VAPB-204ENST00000475243 Q8N3U1 123 aa7.75□□□□□ -1.17
VAPB-204ENST00000475243 CSDC2Q9Y534 153 aaKnown RBP7.74□□□□□ -1.17
VAPB-204ENST00000475243 C2orf48Q96LS8 159 aa7.74□□□□□ -1.17
VAPB-204ENST00000475243 BEAN1Q3B7T3 259 aa7.73□□□□□ -1.17
VAPB-204ENST00000475243 H0Y9P7 68 aa7.73□□□□□ -1.17
VAPB-204ENST00000475243 CHD8Q9HCK8 2581 aa7.73□□□□□ -1.17
VAPB-204ENST00000475243 PSPHP1O15172 72 aa7.73□□□□□ -1.17
VAPB-204ENST00000475243 PCNTO95613 3336 aa7.73□□□□□ -1.17
VAPB-204ENST00000475243 MTORP42345 2549 aa7.72□□□□□ -1.17
VAPB-204ENST00000475243 PCSK5Q92824 1860 aa7.72□□□□□ -1.17
VAPB-204ENST00000475243 BPTFQ12830 3046 aa7.72□□□□□ -1.17
VAPB-204ENST00000475243 A0A1B0GUV1 79 aa7.72□□□□□ -1.17
VAPB-204ENST00000475243 FSHBP01225 129 aa7.71□□□□□ -1.17
VAPB-204ENST00000475243 PRRC2CQ9Y520 2896 aaKnown RBP7.71□□□□□ -1.17
VAPB-204ENST00000475243 POLQO75417 2590 aa7.71□□□□□ -1.17
VAPB-204ENST00000475243 FHL3Q13643 280 aa7.71□□□□□ -1.18
VAPB-204ENST00000475243 A0A096LNJ9 63 aa7.7□□□□□ -1.18
VAPB-204ENST00000475243 PMAIP1Q13794 54 aa7.7□□□□□ -1.18
VAPB-204ENST00000475243 HCG22E2RYF7 251 aa7.7□□□□□ -1.18
VAPB-204ENST00000475243 C22orf24Q9Y442 160 aa7.7□□□□□ -1.18
VAPB-204ENST00000475243 SMIM26A0A096LP01 95 aa7.7□□□□□ -1.18
VAPB-204ENST00000475243 TRBV7-7A0A0K0K1E9 115 aa7.69□□□□□ -1.18
VAPB-204ENST00000475243 Q9UF83 564 aa7.69□□□□□ -1.18
VAPB-204ENST00000475243 C1orf195Q5TG92 126 aa7.69□□□□□ -1.18
VAPB-204ENST00000475243 SMCR5Q8TEV8 140 aa7.69□□□□□ -1.18
VAPB-204ENST00000475243 CEP295Q9C0D2 2601 aa7.68□□□□□ -1.18
VAPB-204ENST00000475243 CRYGAP11844 174 aa7.68□□□□□ -1.18
VAPB-204ENST00000475243 LINC00337Q8N6G1 96 aa7.68□□□□□ -1.18
VAPB-204ENST00000475243 IGKV2D-30A0A075B6S6 120 aa7.68□□□□□ -1.18
VAPB-204ENST00000475243 IGKV2-30P06310 120 aa7.68□□□□□ -1.18
VAPB-204ENST00000475243 LINC00846Q9NV44 126 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms