RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 HNRNPA3P51991 378 aaKnown RBP4.43□□□□□ -1.7
ATG4A-207ENST00000474825 C10orf126Q8N4M7 172 aa4.43□□□□□ -1.7
ATG4A-207ENST00000474825 ZNF625Q96I27 306 aaPredicted RBP4.43□□□□□ -1.7
ATG4A-207ENST00000474825 Q9H8V8 135 aa4.43□□□□□ -1.7
ATG4A-207ENST00000474825 TP73-AS1Q9UF72 201 aa4.43□□□□□ -1.7
ATG4A-207ENST00000474825 IGHV3-64A0A075B6Q5 118 aa4.42□□□□□ -1.7
ATG4A-207ENST00000474825 A0A1B0GV90 55 aa4.42□□□□□ -1.7
ATG4A-207ENST00000474825 ZNF815PA8K554 130 aa4.42□□□□□ -1.7
ATG4A-207ENST00000474825 COX7A2LO14548 114 aa4.42□□□□□ -1.7
ATG4A-207ENST00000474825 NDUFA1O15239 70 aa4.42□□□□□ -1.7
ATG4A-207ENST00000474825 TIMM17BO60830 172 aa4.42□□□□□ -1.7
ATG4A-207ENST00000474825 LGALS3P17931 250 aaKnown RBP4.42□□□□□ -1.7
ATG4A-207ENST00000474825 XCL1P47992 114 aa4.42□□□□□ -1.7
ATG4A-207ENST00000474825 KIAA0087Q14695 138 aa4.42□□□□□ -1.7
ATG4A-207ENST00000474825 TAL2Q16559 108 aa4.42□□□□□ -1.7
ATG4A-207ENST00000474825 LBHQ53QV2 105 aaPredicted RBP4.42□□□□□ -1.7
ATG4A-207ENST00000474825 C5orf38Q86SI9 138 aa4.42□□□□□ -1.7
ATG4A-207ENST00000474825 UBE2WQ96B02 151 aa4.42□□□□□ -1.7
ATG4A-207ENST00000474825 SPANXB1Q9NS25 103 aaPredicted RBP4.42□□□□□ -1.7
ATG4A-207ENST00000474825 NDUFA12Q9UI09 145 aa4.42□□□□□ -1.7
ATG4A-207ENST00000474825 HYDINQ4G0P3 5121 aa4.41□□□□□ -1.7
ATG4A-207ENST00000474825 TENM2Q9NT68 2774 aa4.41□□□□□ -1.7
ATG4A-207ENST00000474825 IGKV3OR2-268A0A0C4DH90 116 aa4.41□□□□□ -1.7
ATG4A-207ENST00000474825 A0A0J9YXY3 114 aa4.41□□□□□ -1.7
ATG4A-207ENST00000474825 GAGE12HA6NDE8 117 aa4.41□□□□□ -1.7
ATG4A-207ENST00000474825 CRPP02741 224 aa4.41□□□□□ -1.7
ATG4A-207ENST00000474825 HERV-K104P63124 156 aa4.41□□□□□ -1.7
ATG4A-207ENST00000474825 SFTA2Q6UW10 78 aa4.41□□□□□ -1.7
ATG4A-207ENST00000474825 CLPSL2Q6UWE3 100 aa4.41□□□□□ -1.7
ATG4A-207ENST00000474825 Q8IZM0 81 aa4.41□□□□□ -1.7
ATG4A-207ENST00000474825 LITAFQ99732 161 aa4.41□□□□□ -1.7
ATG4A-207ENST00000474825 TM2D2Q9BX73 214 aa4.41□□□□□ -1.7
ATG4A-207ENST00000474825 PPDPFQ9H3Y8 114 aa4.41□□□□□ -1.7
ATG4A-207ENST00000474825 CBY1Q9Y3M2 126 aa4.41□□□□□ -1.7
ATG4A-207ENST00000474825 IGLV10-54A0A075B6I4 117 aa4.4□□□□□ -1.71
ATG4A-207ENST00000474825 PTTG1IPP53801 180 aa4.4□□□□□ -1.71
ATG4A-207ENST00000474825 HSD52Q0P140 79 aa4.4□□□□□ -1.71
ATG4A-207ENST00000474825 Q6ZVH6 145 aa4.4□□□□□ -1.71
ATG4A-207ENST00000474825 COX7B2Q8TF08 81 aa4.4□□□□□ -1.71
ATG4A-207ENST00000474825 SNHG12Q9BXW3 62 aa4.4□□□□□ -1.71
ATG4A-207ENST00000474825 FAT2Q9NYQ8 4349 aa4.4□□□□□ -1.71
ATG4A-207ENST00000474825 FRAS1Q86XX4 4008 aa4.39□□□□□ -1.71
ATG4A-207ENST00000474825 LCE6AA0A183 80 aa4.39□□□□□ -1.71
ATG4A-207ENST00000474825 F8WDY8 70 aa4.39□□□□□ -1.71
ATG4A-207ENST00000474825 M0R143 59 aa4.39□□□□□ -1.71
ATG4A-207ENST00000474825 APOMO95445 188 aa4.39□□□□□ -1.71
ATG4A-207ENST00000474825 CXCL5P42830 114 aa4.39□□□□□ -1.71
ATG4A-207ENST00000474825 BVES-AS1Q5T3Y7 98 aa4.39□□□□□ -1.71
ATG4A-207ENST00000474825 C1orf43Q9BWL3 253 aa4.39□□□□□ -1.71
ATG4A-207ENST00000474825 SPANXDQ9BXN6 97 aa4.39□□□□□ -1.71
ATG4A-207ENST00000474825 KRTAP1-5Q9BYS1 174 aa4.39□□□□□ -1.71
ATG4A-207ENST00000474825 SPANXCQ9NY87 97 aa4.39□□□□□ -1.71
ATG4A-207ENST00000474825 COX11Q9Y6N1 276 aa4.39□□□□□ -1.71
ATG4A-207ENST00000474825 GVQW2A0A096LPI5 108 aaPredicted RBP4.38□□□□□ -1.71
ATG4A-207ENST00000474825 TTC32Q5I0X7 151 aa4.38□□□□□ -1.71
ATG4A-207ENST00000474825 C15orf56Q8N910 161 aa4.38□□□□□ -1.71
ATG4A-207ENST00000474825 NTN5Q8WTR8 489 aaPredicted RBP4.38□□□□□ -1.71
ATG4A-207ENST00000474825 RMI2Q96E14 147 aa4.38□□□□□ -1.71
ATG4A-207ENST00000474825 LOC107984156A0A0G2JMH3 177 aa4.37□□□□□ -1.71
ATG4A-207ENST00000474825 NBDYA0A0U1RRE5 68 aa4.37□□□□□ -1.71
ATG4A-207ENST00000474825 A0A1B0GWB2 263 aa4.37□□□□□ -1.71
ATG4A-207ENST00000474825 TMEM238C9JI98 176 aa4.37□□□□□ -1.71
ATG4A-207ENST00000474825 MALP21145 153 aa4.37□□□□□ -1.71
ATG4A-207ENST00000474825 C6orf226Q5I0X4 101 aa4.37□□□□□ -1.71
ATG4A-207ENST00000474825 ADAMTSL4-AS1Q5T5F5 129 aa4.37□□□□□ -1.71
ATG4A-207ENST00000474825 SCGB1D4Q6XE38 83 aa4.37□□□□□ -1.71
ATG4A-207ENST00000474825 ARL17AQ8IVW1 177 aa4.37□□□□□ -1.71
ATG4A-207ENST00000474825 UBE2DNLQ8IWF7 75 aa4.37□□□□□ -1.71
ATG4A-207ENST00000474825 CEND1Q8N111 149 aa4.37□□□□□ -1.71
ATG4A-207ENST00000474825 ORAOV1Q8WV07 137 aa4.37□□□□□ -1.71
ATG4A-207ENST00000474825 C2orf48Q96LS8 159 aa4.37□□□□□ -1.71
ATG4A-207ENST00000474825 DNAH8Q96JB1 4490 aa4.36□□□□□ -1.71
ATG4A-207ENST00000474825 RYR2Q92736 4967 aa4.36□□□□□ -1.71
ATG4A-207ENST00000474825 IGKV2D-24A0A075B6R9 120 aa4.36□□□□□ -1.71
ATG4A-207ENST00000474825 PRSS2P07478 247 aa4.36□□□□□ -1.71
ATG4A-207ENST00000474825 IFITM1P13164 125 aa4.36□□□□□ -1.71
ATG4A-207ENST00000474825 HINT1P49773 126 aaPredicted RBP4.36□□□□□ -1.71
ATG4A-207ENST00000474825 FXYD2P54710 66 aa4.36□□□□□ -1.71
ATG4A-207ENST00000474825 SPAG11BQ08648 103 aa4.36□□□□□ -1.71
ATG4A-207ENST00000474825 COX17Q14061 63 aa4.36□□□□□ -1.71
ATG4A-207ENST00000474825 C21orf62-AS1Q17RA5 79 aa4.36□□□□□ -1.71
ATG4A-207ENST00000474825 CFAP161Q6P656 301 aa4.36□□□□□ -1.71
ATG4A-207ENST00000474825 Q6ZR54 194 aa4.36□□□□□ -1.71
ATG4A-207ENST00000474825 Q6ZRN7 208 aaPredicted RBP4.36□□□□□ -1.71
ATG4A-207ENST00000474825 DNAH5Q8TE73 4624 aa4.35□□□□□ -1.71
ATG4A-207ENST00000474825 CIRBPQ14011 172 aaKnown RBP4.35□□□□□ -1.71
ATG4A-207ENST00000474825 HIST1H4GQ99525 98 aa4.35□□□□□ -1.71
ATG4A-207ENST00000474825 Q9HAA7 133 aa4.35□□□□□ -1.71
ATG4A-207ENST00000474825 TOMM7Q9P0U1 55 aa4.35□□□□□ -1.71
ATG4A-207ENST00000474825 HECTD4Q9Y4D8 3996 aa4.34□□□□□ -1.71
ATG4A-207ENST00000474825 TRBV30A0A0K0K1B3 111 aa4.34□□□□□ -1.71
ATG4A-207ENST00000474825 SMIM13P0DJ93 91 aa4.34□□□□□ -1.71
ATG4A-207ENST00000474825 GCSHP23434 173 aa4.34□□□□□ -1.71
ATG4A-207ENST00000474825 PCP4P48539 62 aa4.34□□□□□ -1.71
ATG4A-207ENST00000474825 CKS1BP61024 79 aa4.34□□□□□ -1.71
ATG4A-207ENST00000474825 SRSF9Q13242 221 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATG4A-207ENST00000474825 RNF151Q2KHN1 245 aa4.34□□□□□ -1.71
ATG4A-207ENST00000474825 COL5A1-AS1Q5SY13 56 aa4.34□□□□□ -1.71
ATG4A-207ENST00000474825 C10orf25Q5T742 122 aa4.34□□□□□ -1.71
ATG4A-207ENST00000474825 C2orf82Q6UX34 121 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms