RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 Q5VV11 94 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 KRTAP26-1Q6PEX3 210 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 C10orf99Q6UWK7 81 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 HEPN1Q6WQI6 88 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 FAM103A1Q9BTL3 118 aaKnown RBP0.35□□□□□ -2.35
HDAC9-222ENST00000474742 PROK2Q9HC23 129 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 LINC00846Q9NV44 126 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 ABRACLQ9P1F3 81 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 HIGD1BQ9P298 99 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 DNAJC13O75165 2243 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 F5P12259 2224 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 LAMA4Q16363 1823 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 SBF2Q86WG5 1849 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 URB1O60287 2271 aaKnown RBP0.35□□□□□ -2.35
HDAC9-222ENST00000474742 LRRC37A2A6NM11 1700 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 PTPRMP28827 1452 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 KIAA0556O60303 1618 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 MROH1Q8NDA8 1641 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 RAPGEF6Q8TEU7 1601 aa0.35□□□□□ -2.35
HDAC9-222ENST00000474742 LAMB1P07942 1786 aa0.34□□□□□ -2.35
HDAC9-222ENST00000474742 ROBO1Q9Y6N7 1651 aa0.34□□□□□ -2.35
HDAC9-222ENST00000474742 NBDYA0A0U1RRE5 68 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 CLPSL1A2RUU4 121 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 LINC01549A6NIU2 74 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 K7EMI3 77 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 SPINK4O60575 86 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 TECTAO75443 2155 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 COX7BP24311 80 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 PLNP26678 52 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 SPINK7P58062 85 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 TIAM1Q13009 1591 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 ITSN1Q15811 1721 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 TPRXLQ17RH7 258 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 KRTAP13-4Q3LI77 160 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 TDRG1Q3Y452 100 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 Q6ZSA8 131 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 PKD1L3Q7Z443 1732 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 DEFB132Q7Z7B7 95 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 VWDEQ8N2E2 1590 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 THOC2Q8NI27 1593 aaKnown RBP0.34□□□□□ -2.36
HDAC9-222ENST00000474742 SPACA4Q8TDM5 124 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 CNFNQ9BYD5 112 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 CFAP74Q9C0B2 1584 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 PRO0255Q9UI72 69 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 ANKRD50Q9ULJ7 1429 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 HILPDAQ9Y5L2 63 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 CCDC180Q9P1Z9 1646 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 ATP7BP35670 1465 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 MAP2P11137 1827 aaKnown RBP0.34□□□□□ -2.36
HDAC9-222ENST00000474742 WNK3Q9BYP7 1800 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 ZNF236Q9UL36 1845 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 ARFGEF1Q9Y6D6 1849 aa0.34□□□□□ -2.36
HDAC9-222ENST00000474742 TET3O43151 1660 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 C5P01031 1676 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 MYOM1P52179 1685 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 RP1L1Q8IWN7 2480 aaPredicted RBP0.33□□□□□ -2.36
HDAC9-222ENST00000474742 CACNA1EQ15878 2313 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 PLCE1Q9P212 2302 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 CPS1P31327 1500 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 HMGXB3Q12766 1538 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 NEXMIFQ5QGS0 1516 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 MAGI3Q5TCQ9 1506 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 LMTK2Q8IWU2 1503 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.33□□□□□ -2.36
HDAC9-222ENST00000474742 COL4A2P08572 1712 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 NUP188Q5SRE5 1749 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 KNDC1Q76NI1 1749 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 IFT172Q9UG01 1749 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 CRYBG1Q9Y4K1 1723 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 ASXL3Q9C0F0 2248 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 INO80Q9ULG1 1556 aaPredicted RBP0.33□□□□□ -2.36
HDAC9-222ENST00000474742 ANKRD36A6QL64 1941 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 WNK2Q9Y3S1 2297 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 LOC285556D6RIA3 1793 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 MUC22E2RYF6 1773 aaPredicted RBP0.33□□□□□ -2.36
HDAC9-222ENST00000474742 LTN1O94822 1766 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 RGPD2P0DJD1 1756 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 COL14A1Q05707 1796 aaKnown RBP0.33□□□□□ -2.36
HDAC9-222ENST00000474742 GVQW2A0A096LPI5 108 aaPredicted RBP0.33□□□□□ -2.36
HDAC9-222ENST00000474742 ETDCA0A1B0GVM5 59 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 CPSF4LA6NMK7 179 aaKnown RBP0.33□□□□□ -2.36
HDAC9-222ENST00000474742 SNRPGP15A8MWD9 76 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 NDUFA4O00483 81 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 LY6G6CO95867 125 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 C3orf79P0CE67 100 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 LYNX1P0DP58 116 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 COX6B1P14854 86 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 RPL37P61927 97 aaKnown RBP0.33□□□□□ -2.36
HDAC9-222ENST00000474742 DEFB121Q5J5C9 76 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 ENHOQ6UWT2 76 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 Q6ZRN7 208 aaPredicted RBP0.33□□□□□ -2.36
HDAC9-222ENST00000474742 Q8IZM0 81 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 TOMM5Q8N4H5 51 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 Q96NJ1 140 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 TP53AIP1Q9HCN2 124 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 TMEM167BQ9NRX6 74 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 CDKN2A-AS1Q9UH64 79 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 C1orf167Q5SNV9 1468 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 E9PCH4 1651 aa0.33□□□□□ -2.36
HDAC9-222ENST00000474742 ADAMTS7Q9UKP4 1686 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms