RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 LYRM9A8MSI8 78 aa14.52□□□□□ -0.08
SMIM11A-204ENST00000474455 ACYP1P07311 99 aa14.52□□□□□ -0.08
SMIM11A-204ENST00000474455 CSDC2Q9Y534 153 aaKnown RBP14.52□□□□□ -0.08
SMIM11A-204ENST00000474455 NPC2P61916 151 aa14.52□□□□□ -0.09
SMIM11A-204ENST00000474455 GAGE12JA6NER3 117 aa14.51□□□□□ -0.09
SMIM11A-204ENST00000474455 GAGE4Q13068 117 aa14.51□□□□□ -0.09
SMIM11A-204ENST00000474455 COX7A2LO14548 114 aa14.5□□□□□ -0.09
SMIM11A-204ENST00000474455 SPART-AS1P0CW21 52 aa14.5□□□□□ -0.09
SMIM11A-204ENST00000474455 IGHV3-38A0A0C4DH36 116 aa14.5□□□□□ -0.09
SMIM11A-204ENST00000474455 DAD1P61803 113 aa14.5□□□□□ -0.09
SMIM11A-204ENST00000474455 TRBV10-1A0A0K0K1A3 114 aa14.49□□□□□ -0.09
SMIM11A-204ENST00000474455 C11orf68Q9H3H3 251 aaKnown RBP14.49□□□□□ -0.09
SMIM11A-204ENST00000474455 LINC00242Q5T6M2 205 aa14.48□□□□□ -0.09
SMIM11A-204ENST00000474455 Q9H8V8 135 aa14.48□□□□□ -0.09
SMIM11A-204ENST00000474455 STAB2Q8WWQ8 2551 aa14.48□□□□□ -0.09
SMIM11A-204ENST00000474455 HERV-K104P63124 156 aa14.48□□□□□ -0.09
SMIM11A-204ENST00000474455 FHL2Q14192 279 aa14.48□□□□□ -0.09
SMIM11A-204ENST00000474455 TRBV7-7A0A0K0K1E9 115 aa14.47□□□□□ -0.09
SMIM11A-204ENST00000474455 COX6A2Q02221 97 aa14.47□□□□□ -0.09
SMIM11A-204ENST00000474455 TRACP01848 142 aa14.46□□□□□ -0.1
SMIM11A-204ENST00000474455 NANOS2P60321 138 aaKnown RBP14.46□□□□□ -0.1
SMIM11A-204ENST00000474455 DAZ4Q86SG3 579 aaKnown RBP14.46□□□□□ -0.1
SMIM11A-204ENST00000474455 DAZ3Q9NR90 486 aaKnown RBP14.46□□□□□ -0.1
SMIM11A-204ENST00000474455 TRGV4A0A0C4DH28 118 aa14.45□□□□□ -0.1
SMIM11A-204ENST00000474455 SMIM1B2RUZ4 78 aa14.45□□□□□ -0.1
SMIM11A-204ENST00000474455 RPL36AP83881 106 aaKnown RBP14.45□□□□□ -0.1
SMIM11A-204ENST00000474455 DAND5Q8N907 189 aa14.45□□□□□ -0.1
SMIM11A-204ENST00000474455 RPL36ALQ969Q0 106 aaKnown RBP14.45□□□□□ -0.1
SMIM11A-204ENST00000474455 B5MCH6 92 aa14.44□□□□□ -0.1
SMIM11A-204ENST00000474455 IMUPQ9GZP8 106 aa14.44□□□□□ -0.1
SMIM11A-204ENST00000474455 LOC100131303A0A0U1RQF7 123 aa14.44□□□□□ -0.1
SMIM11A-204ENST00000474455 HTN3P15516 51 aa14.44□□□□□ -0.1
SMIM11A-204ENST00000474455 Q6ZTC4 211 aa14.44□□□□□ -0.1
SMIM11A-204ENST00000474455 ZNF625Q96I27 306 aaPredicted RBP14.44□□□□□ -0.1
SMIM11A-204ENST00000474455 FBN3Q75N90 2809 aa14.43□□□□□ -0.1
SMIM11A-204ENST00000474455 C11orf45Q8TAV5 145 aa14.42□□□□□ -0.1
SMIM11A-204ENST00000474455 K7EQD1 137 aa14.42□□□□□ -0.1
SMIM11A-204ENST00000474455 SS18L2Q9UHA2 77 aa14.42□□□□□ -0.1
SMIM11A-204ENST00000474455 ATP5G1P05496 136 aa14.4□□□□□ -0.1
SMIM11A-204ENST00000474455 F5H768 121 aa14.4□□□□□ -0.1
SMIM11A-204ENST00000474455 CCDC179H3BU77 68 aa14.4□□□□□ -0.1
SMIM11A-204ENST00000474455 MEIG1Q5JSS6 88 aa14.4□□□□□ -0.1
SMIM11A-204ENST00000474455 SOSTDC1Q6X4U4 206 aa14.4□□□□□ -0.1
SMIM11A-204ENST00000474455 CDC42SE2Q9NRR3 84 aa14.4□□□□□ -0.1
SMIM11A-204ENST00000474455 DNAH7Q8WXX0 4024 aa14.4□□□□□ -0.1
SMIM11A-204ENST00000474455 CSMD3Q7Z407 3707 aa14.38□□□□□ -0.11
SMIM11A-204ENST00000474455 LINC00694P0DN24 101 aa14.38□□□□□ -0.11
SMIM11A-204ENST00000474455 TRBV6-4A0A1B0GX49 114 aa14.37□□□□□ -0.11
SMIM11A-204ENST00000474455 TRAV13-2A0A0B4J235 113 aa14.36□□□□□ -0.11
SMIM11A-204ENST00000474455 NTM-AS1Q6ZSK4 140 aa14.36□□□□□ -0.11
SMIM11A-204ENST00000474455 LINC00643Q86TS7 51 aa14.36□□□□□ -0.11
SMIM11A-204ENST00000474455 TGP01266 2768 aa14.36□□□□□ -0.11
SMIM11A-204ENST00000474455 TRAV13-1A0A0B4J241 112 aa14.35□□□□□ -0.11
SMIM11A-204ENST00000474455 PRO0255Q9UI72 69 aa14.35□□□□□ -0.11
SMIM11A-204ENST00000474455 PAX4O43316 350 aa14.33□□□□□ -0.11
SMIM11A-204ENST00000474455 BAALC-AS2P0C853 105 aa14.33□□□□□ -0.11
SMIM11A-204ENST00000474455 INAFM2P0DMQ5 153 aa14.33□□□□□ -0.11
SMIM11A-204ENST00000474455 GYPEP15421 78 aa14.33□□□□□ -0.11
SMIM11A-204ENST00000474455 RPL28P46779 137 aaKnown RBP14.33□□□□□ -0.11
SMIM11A-204ENST00000474455 SDIM1Q6ZPB5 146 aa14.33□□□□□ -0.11
SMIM11A-204ENST00000474455 TMEM243Q9BU79 118 aa14.33□□□□□ -0.11
SMIM11A-204ENST00000474455 UBE2L6O14933 153 aa14.33□□□□□ -0.12
SMIM11A-204ENST00000474455 A0A096LPF7 62 aa14.32□□□□□ -0.12
SMIM11A-204ENST00000474455 A0A0U1RRA0 63 aa14.31□□□□□ -0.12
SMIM11A-204ENST00000474455 DYNC2H1Q8NCM8 4307 aaKnown RBP14.31□□□□□ -0.12
SMIM11A-204ENST00000474455 DEFB131BA0A096LNP1 70 aa14.31□□□□□ -0.12
SMIM11A-204ENST00000474455 STARD9Q9P2P6 4700 aa14.3□□□□□ -0.12
SMIM11A-204ENST00000474455 LYSTQ99698 3801 aa14.3□□□□□ -0.12
SMIM11A-204ENST00000474455 CRPP02741 224 aa14.29□□□□□ -0.12
SMIM11A-204ENST00000474455 PLECQ15149 4684 aaKnown RBP14.29□□□□□ -0.12
SMIM11A-204ENST00000474455 CXCL5P42830 114 aa14.29□□□□□ -0.12
SMIM11A-204ENST00000474455 COX7B2Q8TF08 81 aa14.29□□□□□ -0.12
SMIM11A-204ENST00000474455 TMEM126AQ9H061 195 aa14.27□□□□□ -0.12
SMIM11A-204ENST00000474455 MALP21145 153 aa14.25□□□□□ -0.13
SMIM11A-204ENST00000474455 CHCHD5Q9BSY4 110 aa14.25□□□□□ -0.13
SMIM11A-204ENST00000474455 C22orf24Q9Y442 160 aa14.25□□□□□ -0.13
SMIM11A-204ENST00000474455 FAM218AQ96MZ4 157 aa14.25□□□□□ -0.13
SMIM11A-204ENST00000474455 TRAV10A0A0B4J240 114 aa14.24□□□□□ -0.13
SMIM11A-204ENST00000474455 H0YGX0 51 aa14.24□□□□□ -0.13
SMIM11A-204ENST00000474455 SMCR5Q8TEV8 140 aa14.24□□□□□ -0.13
SMIM11A-204ENST00000474455 SND1-IT1Q9HBX3 110 aa14.23□□□□□ -0.13
SMIM11A-204ENST00000474455 FAM236AA0A1B0GUQ0 79 aa14.23□□□□□ -0.13
SMIM11A-204ENST00000474455 FAM236BA0A1B0GV22 79 aa14.23□□□□□ -0.13
SMIM11A-204ENST00000474455 MIR7-3HGQ8N6C7 128 aa14.22□□□□□ -0.13
SMIM11A-204ENST00000474455 IBA57-AS1B1ANH7 110 aa14.21□□□□□ -0.13
SMIM11A-204ENST00000474455 C5orf38Q86SI9 138 aa14.21□□□□□ -0.13
SMIM11A-204ENST00000474455 IGKV2-28A0A075B6P5 120 aa14.2□□□□□ -0.14
SMIM11A-204ENST00000474455 IGKV2D-28P01615 120 aa14.2□□□□□ -0.14
SMIM11A-204ENST00000474455 LINC00337Q8N6G1 96 aa14.2□□□□□ -0.14
SMIM11A-204ENST00000474455 DNAL4O96015 105 aa14.19□□□□□ -0.14
SMIM11A-204ENST00000474455 LINC00158P58513 81 aa14.17□□□□□ -0.14
SMIM11A-204ENST00000474455 A0A087WZ39 114 aa14.16□□□□□ -0.14
SMIM11A-204ENST00000474455 IGHV3OR16-9A0A0B4J2B5 98 aa14.16□□□□□ -0.14
SMIM11A-204ENST00000474455 H3BNG1 76 aa14.16□□□□□ -0.14
SMIM11A-204ENST00000474455 GAGE2AQ6NT46 116 aa14.16□□□□□ -0.14
SMIM11A-204ENST00000474455 C3orf22Q8N5N4 141 aa14.16□□□□□ -0.14
SMIM11A-204ENST00000474455 SMIM11BQ8TCY0 68 aa14.16□□□□□ -0.14
SMIM11A-204ENST00000474455 OBSCN-AS1Q96MR7 158 aa14.16□□□□□ -0.14
SMIM11A-204ENST00000474455 TRBV6-8A0A0A6YYG3 113 aa14.15□□□□□ -0.14
SMIM11A-204ENST00000474455 CCL18P55774 89 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms