RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 DNAH2Q9P225 4427 aa13.51□□□□□ -0.25
CDHR3-210ENST00000474330 HERV-K104P63124 156 aa13.5□□□□□ -0.25
CDHR3-210ENST00000474330 TM2D2Q9BX73 214 aa13.5□□□□□ -0.25
CDHR3-210ENST00000474330 SPAG11BQ08648 103 aa13.5□□□□□ -0.25
CDHR3-210ENST00000474330 CXCL5P42830 114 aa13.49□□□□□ -0.25
CDHR3-210ENST00000474330 CFAP161Q6P656 301 aa13.49□□□□□ -0.25
CDHR3-210ENST00000474330 C15orf56Q8N910 161 aa13.48□□□□□ -0.25
CDHR3-210ENST00000474330 CKS1BP61024 79 aa13.47□□□□□ -0.25
CDHR3-210ENST00000474330 BIRC6Q9NR09 4857 aa13.46□□□□□ -0.25
CDHR3-210ENST00000474330 M0R2N4 97 aa13.46□□□□□ -0.26
CDHR3-210ENST00000474330 TIMM17BO60830 172 aa13.46□□□□□ -0.26
CDHR3-210ENST00000474330 SPANXB1Q9NS25 103 aaPredicted RBP13.46□□□□□ -0.26
CDHR3-210ENST00000474330 HSD52Q0P140 79 aa13.45□□□□□ -0.26
CDHR3-210ENST00000474330 TAL2Q16559 108 aa13.45□□□□□ -0.26
CDHR3-210ENST00000474330 C2orf82Q6UX34 121 aa13.45□□□□□ -0.26
CDHR3-210ENST00000474330 NTN5Q8WTR8 489 aaPredicted RBP13.45□□□□□ -0.26
CDHR3-210ENST00000474330 GVQW2A0A096LPI5 108 aaPredicted RBP13.44□□□□□ -0.26
CDHR3-210ENST00000474330 TMEM238C9JI98 176 aa13.44□□□□□ -0.26
CDHR3-210ENST00000474330 ZNF561-AS1K7EIQ3 104 aa13.44□□□□□ -0.26
CDHR3-210ENST00000474330 Q6ZR54 194 aa13.44□□□□□ -0.26
CDHR3-210ENST00000474330 LITAFQ99732 161 aa13.44□□□□□ -0.26
CDHR3-210ENST00000474330 CIRBPQ14011 172 aaKnown RBP13.43□□□□□ -0.26
CDHR3-210ENST00000474330 HIGD2BQ4VC39 106 aa13.43□□□□□ -0.26
CDHR3-210ENST00000474330 C6orf223Q8N319 242 aa13.43□□□□□ -0.26
CDHR3-210ENST00000474330 LINC00526Q96FQ7 95 aa13.43□□□□□ -0.26
CDHR3-210ENST00000474330 HIST1H4GQ99525 98 aa13.42□□□□□ -0.26
CDHR3-210ENST00000474330 USP17L23D6RBM5 183 aa13.42□□□□□ -0.26
CDHR3-210ENST00000474330 SRSF9Q13242 221 aaKnown RBP eCLIP13.42□□□□□ -0.26
CDHR3-210ENST00000474330 MEIG1Q5JSS6 88 aa13.42□□□□□ -0.26
CDHR3-210ENST00000474330 FAT2Q9NYQ8 4349 aa13.41□□□□□ -0.26
CDHR3-210ENST00000474330 DNAH17Q9UFH2 4485 aa13.41□□□□□ -0.26
CDHR3-210ENST00000474330 PSCAO43653 123 aa13.41□□□□□ -0.26
CDHR3-210ENST00000474330 ADAMTSL4-AS1Q5T5F5 129 aa13.41□□□□□ -0.26
CDHR3-210ENST00000474330 C2orf48Q96LS8 159 aa13.41□□□□□ -0.26
CDHR3-210ENST00000474330 F8WDY8 70 aa13.4□□□□□ -0.26
CDHR3-210ENST00000474330 HINT1P49773 126 aaPredicted RBP13.4□□□□□ -0.26
CDHR3-210ENST00000474330 SPANXDQ9BXN6 97 aa13.4□□□□□ -0.26
CDHR3-210ENST00000474330 SPANXCQ9NY87 97 aa13.4□□□□□ -0.26
CDHR3-210ENST00000474330 M0R143 59 aa13.39□□□□□ -0.27
CDHR3-210ENST00000474330 BVES-AS1Q5T3Y7 98 aa13.39□□□□□ -0.27
CDHR3-210ENST00000474330 UNQ6190/PRO20217Q6UXQ8 127 aa13.39□□□□□ -0.27
CDHR3-210ENST00000474330 Q6ZRN7 208 aaPredicted RBP13.39□□□□□ -0.27
CDHR3-210ENST00000474330 Q6ZVH6 145 aa13.39□□□□□ -0.27
CDHR3-210ENST00000474330 SMIM13P0DJ93 91 aa13.39□□□□□ -0.27
CDHR3-210ENST00000474330 C10orf25Q5T742 122 aa13.39□□□□□ -0.27
CDHR3-210ENST00000474330 CEND1Q8N111 149 aa13.39□□□□□ -0.27
CDHR3-210ENST00000474330 ERG28Q9UKR5 140 aa13.39□□□□□ -0.27
CDHR3-210ENST00000474330 HECTD4Q9Y4D8 3996 aa13.38□□□□□ -0.27
CDHR3-210ENST00000474330 CAMK2N2Q96S95 79 aa13.38□□□□□ -0.27
CDHR3-210ENST00000474330 SNHG12Q9BXW3 62 aa13.38□□□□□ -0.27
CDHR3-210ENST00000474330 GCSHP23434 173 aa13.37□□□□□ -0.27
CDHR3-210ENST00000474330 A0A0U1RRA0 63 aa13.36□□□□□ -0.27
CDHR3-210ENST00000474330 COX17Q14061 63 aa13.35□□□□□ -0.27
CDHR3-210ENST00000474330 TRBV30A0A0K0K1B3 111 aa13.35□□□□□ -0.27
CDHR3-210ENST00000474330 LECT2O14960 151 aa13.35□□□□□ -0.27
CDHR3-210ENST00000474330 PFN2P35080 140 aa13.35□□□□□ -0.27
CDHR3-210ENST00000474330 LINC00158P58513 81 aa13.35□□□□□ -0.27
CDHR3-210ENST00000474330 EREGO14944 169 aa13.34□□□□□ -0.27
CDHR3-210ENST00000474330 BATFQ16520 125 aa13.34□□□□□ -0.27
CDHR3-210ENST00000474330 C1orf134Q5TEV5 83 aa13.34□□□□□ -0.27
CDHR3-210ENST00000474330 DAND5Q8N907 189 aa13.34□□□□□ -0.27
CDHR3-210ENST00000474330 C6orf48Q9UBA6 75 aa13.34□□□□□ -0.27
CDHR3-210ENST00000474330 IFITM1P13164 125 aa13.33□□□□□ -0.28
CDHR3-210ENST00000474330 PTTG1IPP53801 180 aa13.33□□□□□ -0.28
CDHR3-210ENST00000474330 FXYD2P54710 66 aa13.33□□□□□ -0.28
CDHR3-210ENST00000474330 SYCNQ0VAF6 134 aa13.33□□□□□ -0.28
CDHR3-210ENST00000474330 WFDC2Q14508 124 aa13.33□□□□□ -0.28
CDHR3-210ENST00000474330 Q6ZRU5 148 aa13.33□□□□□ -0.28
CDHR3-210ENST00000474330 MUSTN1Q8IVN3 82 aa13.33□□□□□ -0.28
CDHR3-210ENST00000474330 C9orf116Q5BN46 136 aaPredicted RBP13.32□□□□□ -0.28
CDHR3-210ENST00000474330 MIR7-3HGQ8N6C7 128 aa13.32□□□□□ -0.28
CDHR3-210ENST00000474330 PKD1P98161 4303 aa13.32□□□□□ -0.28
CDHR3-210ENST00000474330 LRCOL1A6NCL2 159 aa13.31□□□□□ -0.28
CDHR3-210ENST00000474330 C14orf177Q52M58 125 aa13.31□□□□□ -0.28
CDHR3-210ENST00000474330 SLPIP03973 132 aa13.3□□□□□ -0.28
CDHR3-210ENST00000474330 LINC00308Q8TCZ7 52 aa13.3□□□□□ -0.28
CDHR3-210ENST00000474330 PPDPFQ9H3Y8 114 aa13.3□□□□□ -0.28
CDHR3-210ENST00000474330 RPL24P83731 157 aaKnown RBP13.29□□□□□ -0.28
CDHR3-210ENST00000474330 COPS9Q8WXC6 57 aa13.29□□□□□ -0.28
CDHR3-210ENST00000474330 NPC2P61916 151 aa13.28□□□□□ -0.28
CDHR3-210ENST00000474330 RNF151Q2KHN1 245 aa13.28□□□□□ -0.28
CDHR3-210ENST00000474330 CARD19Q96LW7 228 aa13.28□□□□□ -0.28
CDHR3-210ENST00000474330 TMEM238LA0A1B0GVL6 79 aa13.28□□□□□ -0.28
CDHR3-210ENST00000474330 A6NJY4 79 aa13.28□□□□□ -0.28
CDHR3-210ENST00000474330 EIF4EBP3O60516 100 aaPredicted RBP13.28□□□□□ -0.28
CDHR3-210ENST00000474330 SOSTDC1Q6X4U4 206 aa13.28□□□□□ -0.28
CDHR3-210ENST00000474330 A4D1N5 150 aa13.26□□□□□ -0.29
CDHR3-210ENST00000474330 A6NDN8 102 aa13.26□□□□□ -0.29
CDHR3-210ENST00000474330 RTL8CO15255 209 aa13.26□□□□□ -0.29
CDHR3-210ENST00000474330 PKHD1P08F94 4074 aa13.25□□□□□ -0.29
CDHR3-210ENST00000474330 LOC107984156A0A0G2JMH3 177 aa13.24□□□□□ -0.29
CDHR3-210ENST00000474330 ARL17AQ8IVW1 177 aa13.24□□□□□ -0.29
CDHR3-210ENST00000474330 CNBPP62633 177 aaKnown RBP13.24□□□□□ -0.29
CDHR3-210ENST00000474330 LBHQ53QV2 105 aaPredicted RBP13.24□□□□□ -0.29
CDHR3-210ENST00000474330 NHP2Q9NX24 153 aaKnown RBP13.24□□□□□ -0.29
CDHR3-210ENST00000474330 COL5A1-AS1Q5SY13 56 aa13.23□□□□□ -0.29
CDHR3-210ENST00000474330 A0A087WTM6 91 aa13.22□□□□□ -0.29
CDHR3-210ENST00000474330 A0A1B0GWB2 263 aa13.22□□□□□ -0.29
CDHR3-210ENST00000474330 NDUFC2-KCTD14E9PQ53 114 aa13.22□□□□□ -0.29
CDHR3-210ENST00000474330 TLX1NBP0CAT3 122 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms