RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 SHROOM2Q13796 1616 aa-0.75□□□□□ -2.53
ECHDC1-213ENST00000474240 NAP1L6A6NFF2 107 aa-0.75□□□□□ -2.53
ECHDC1-213ENST00000474240 SNAPC5O75971 98 aa-0.75□□□□□ -2.53
ECHDC1-213ENST00000474240 DEFB135Q30KP9 77 aa-0.75□□□□□ -2.53
ECHDC1-213ENST00000474240 APLNQ9ULZ1 77 aa-0.75□□□□□ -2.53
ECHDC1-213ENST00000474240 ARHGEF5Q12774 1597 aa-0.75□□□□□ -2.53
ECHDC1-213ENST00000474240 NIPBLQ6KC79 2804 aaeCLIP-0.76□□□□□ -2.53
ECHDC1-213ENST00000474240 DNHD1Q96M86 4753 aa-0.76□□□□□ -2.53
ECHDC1-213ENST00000474240 PP6455Q8WZ26 134 aa-0.76□□□□□ -2.53
ECHDC1-213ENST00000474240 A2ML1A8K2U0 1454 aa-0.76□□□□□ -2.53
ECHDC1-213ENST00000474240 C1orf167Q5SNV9 1468 aa-0.76□□□□□ -2.53
ECHDC1-213ENST00000474240 XRN1Q8IZH2 1706 aaKnown RBP-0.76□□□□□ -2.53
ECHDC1-213ENST00000474240 USP9YO00507 2555 aaPredicted RBP-0.76□□□□□ -2.53
ECHDC1-213ENST00000474240 LRP1BQ9NZR2 4599 aa-0.76□□□□□ -2.53
ECHDC1-213ENST00000474240 FOCADQ5VW36 1801 aa-0.77□□□□□ -2.53
ECHDC1-213ENST00000474240 TET3O43151 1660 aa-0.77□□□□□ -2.53
ECHDC1-213ENST00000474240 DIP2CQ9Y2E4 1556 aa-0.77□□□□□ -2.53
ECHDC1-213ENST00000474240 HMGXB3Q12766 1538 aa-0.77□□□□□ -2.53
ECHDC1-213ENST00000474240 CPSF4LA6NMK7 179 aaKnown RBP-0.77□□□□□ -2.53
ECHDC1-213ENST00000474240 NDUFA2O43678 99 aa-0.77□□□□□ -2.53
ECHDC1-213ENST00000474240 SVBPQ8N300 66 aa-0.77□□□□□ -2.53
ECHDC1-213ENST00000474240 PRO1854Q9UHT4 67 aa-0.77□□□□□ -2.53
ECHDC1-213ENST00000474240 COL12A1Q99715 3063 aa-0.77□□□□□ -2.53
ECHDC1-213ENST00000474240 USP9XQ93008 2570 aaPredicted RBP-0.77□□□□□ -2.53
ECHDC1-213ENST00000474240 OOSP1A8MZH6 123 aa-0.78□□□□□ -2.53
ECHDC1-213ENST00000474240 SAA2P0DJI9 122 aaPredicted RBP-0.78□□□□□ -2.53
ECHDC1-213ENST00000474240 Q0VG73 95 aa-0.78□□□□□ -2.53
ECHDC1-213ENST00000474240 VAMP8Q9BV40 100 aa-0.78□□□□□ -2.53
ECHDC1-213ENST00000474240 LINC00474Q9P2X8 69 aa-0.78□□□□□ -2.53
ECHDC1-213ENST00000474240 TOP2BQ02880 1626 aa-0.78□□□□□ -2.54
ECHDC1-213ENST00000474240 K7EP13 123 aa-0.79□□□□□ -2.54
ECHDC1-213ENST00000474240 HMGN1P05114 100 aa-0.79□□□□□ -2.54
ECHDC1-213ENST00000474240 SPRR2AP35326 72 aa-0.79□□□□□ -2.54
ECHDC1-213ENST00000474240 CRIPTQ9P021 101 aa-0.79□□□□□ -2.54
ECHDC1-213ENST00000474240 NUP188Q5SRE5 1749 aa-0.79□□□□□ -2.54
ECHDC1-213ENST00000474240 CUL7Q14999 1698 aa-0.79□□□□□ -2.54
ECHDC1-213ENST00000474240 QRICH2Q9H0J4 1663 aa-0.79□□□□□ -2.54
ECHDC1-213ENST00000474240 ROBO1Q9Y6N7 1651 aa-0.79□□□□□ -2.54
ECHDC1-213ENST00000474240 WDR87Q6ZQQ6 2873 aa-0.79□□□□□ -2.54
ECHDC1-213ENST00000474240 SCAPERQ9BY12 1400 aa-0.8□□□□□ -2.54
ECHDC1-213ENST00000474240 CRYM-AS1A6NIL9 109 aa-0.8□□□□□ -2.54
ECHDC1-213ENST00000474240 FAM223BA6NKX1 122 aa-0.8□□□□□ -2.54
ECHDC1-213ENST00000474240 I3L3M4 83 aa-0.8□□□□□ -2.54
ECHDC1-213ENST00000474240 KRTDAPP60985 99 aa-0.8□□□□□ -2.54
ECHDC1-213ENST00000474240 KRTAP20-1Q3LI63 56 aa-0.8□□□□□ -2.54
ECHDC1-213ENST00000474240 MAP1AP78559 2803 aaPredicted RBP-0.8□□□□□ -2.54
ECHDC1-213ENST00000474240 MYOM2P54296 1465 aa-0.8□□□□□ -2.54
ECHDC1-213ENST00000474240 FMN2Q9NZ56 1722 aa-0.81□□□□□ -2.54
ECHDC1-213ENST00000474240 SCN7AQ01118 1682 aa-0.81□□□□□ -2.54
ECHDC1-213ENST00000474240 SNCAP37840 140 aa-0.81□□□□□ -2.54
ECHDC1-213ENST00000474240 UBE2D3P61077 147 aa-0.81□□□□□ -2.54
ECHDC1-213ENST00000474240 UBE2D2P62837 147 aa-0.81□□□□□ -2.54
ECHDC1-213ENST00000474240 ITPR3Q14573 2671 aa-0.81□□□□□ -2.54
ECHDC1-213ENST00000474240 A0A1B0GU69 56 aa-0.82□□□□□ -2.54
ECHDC1-213ENST00000474240 LOC100130705A0A1B0GUX0 176 aa-0.82□□□□□ -2.54
ECHDC1-213ENST00000474240 SFTA2Q6UW10 78 aa-0.82□□□□□ -2.54
ECHDC1-213ENST00000474240 DPH3P1Q9H4G8 78 aa-0.82□□□□□ -2.54
ECHDC1-213ENST00000474240 LINC00846Q9NV44 126 aa-0.82□□□□□ -2.54
ECHDC1-213ENST00000474240 PCNX1Q96RV3 2341 aa-0.82□□□□□ -2.54
ECHDC1-213ENST00000474240 ROCK2O75116 1388 aaKnown RBP-0.83□□□□□ -2.54
ECHDC1-213ENST00000474240 CELSR3Q9NYQ7 3312 aa-0.83□□□□□ -2.54
ECHDC1-213ENST00000474240 ADGRL2O95490 1459 aa-0.83□□□□□ -2.54
ECHDC1-213ENST00000474240 NLRP1Q9C000 1473 aa-0.83□□□□□ -2.54
ECHDC1-213ENST00000474240 EIF4G3O43432 1585 aaKnown RBP-0.83□□□□□ -2.54
ECHDC1-213ENST00000474240 PLEKHH2Q8IVE3 1493 aa-0.84□□□□□ -2.54
ECHDC1-213ENST00000474240 MRC2Q9UBG0 1479 aa-0.84□□□□□ -2.54
ECHDC1-213ENST00000474240 H3BQF6 201 aa-0.84□□□□□ -2.54
ECHDC1-213ENST00000474240 GNG4P50150 75 aa-0.84□□□□□ -2.54
ECHDC1-213ENST00000474240 LCN9Q8WX39 176 aa-0.84□□□□□ -2.54
ECHDC1-213ENST00000474240 PAPPA2Q9BXP8 1791 aa-0.84□□□□□ -2.54
ECHDC1-213ENST00000474240 MYO18BQ8IUG5 2567 aa-0.84□□□□□ -2.54
ECHDC1-213ENST00000474240 NALCNQ8IZF0 1738 aa-0.84□□□□□ -2.54
ECHDC1-213ENST00000474240 EDC4Q6P2E9 1401 aaKnown RBP-0.85□□□□□ -2.55
ECHDC1-213ENST00000474240 NRKQ7Z2Y5 1582 aa-0.85□□□□□ -2.55
ECHDC1-213ENST00000474240 IER3IP1Q9Y5U9 82 aa-0.85□□□□□ -2.55
ECHDC1-213ENST00000474240 H3BQ15 152 aa-0.86□□□□□ -2.55
ECHDC1-213ENST00000474240 PPP3R1P63098 170 aa-0.86□□□□□ -2.55
ECHDC1-213ENST00000474240 RPL13AP3Q6NVV1 102 aa-0.86□□□□□ -2.55
ECHDC1-213ENST00000474240 C9orf62Q8N4C0 152 aa-0.86□□□□□ -2.55
ECHDC1-213ENST00000474240 CGREF1Q99674 301 aa-0.86□□□□□ -2.55
ECHDC1-213ENST00000474240 MAPKBP1O60336 1514 aa-0.86□□□□□ -2.55
ECHDC1-213ENST00000474240 FLGP20930 4061 aaPredicted RBP-0.86□□□□□ -2.55
ECHDC1-213ENST00000474240 ARHGAP5Q13017 1502 aa-0.87□□□□□ -2.55
ECHDC1-213ENST00000474240 TRAV30A0A087WSZ9 112 aa-0.87□□□□□ -2.55
ECHDC1-213ENST00000474240 H0YGG7 62 aa-0.87□□□□□ -2.55
ECHDC1-213ENST00000474240 CCL22O00626 93 aa-0.87□□□□□ -2.55
ECHDC1-213ENST00000474240 GNGT1P63211 74 aa-0.87□□□□□ -2.55
ECHDC1-213ENST00000474240 C6orf201Q7Z4U5 140 aa-0.87□□□□□ -2.55
ECHDC1-213ENST00000474240 NKTRP30414 1462 aaKnown RBP-0.87□□□□□ -2.55
ECHDC1-213ENST00000474240 MXRA5Q9NR99 2828 aa-0.88□□□□□ -2.55
ECHDC1-213ENST00000474240 FASNP49327 2511 aaKnown RBP-0.88□□□□□ -2.55
ECHDC1-213ENST00000474240 LRRC37AA6NMS7 1700 aa-0.88□□□□□ -2.55
ECHDC1-213ENST00000474240 TMEM262E9PQX1 116 aa-0.88□□□□□ -2.55
ECHDC1-213ENST00000474240 H1FX-AS1Q4G0G2 97 aa-0.88□□□□□ -2.55
ECHDC1-213ENST00000474240 A0A087WVE0 104 aa-0.89□□□□□ -2.55
ECHDC1-213ENST00000474240 DEFB112Q30KQ8 113 aa-0.89□□□□□ -2.55
ECHDC1-213ENST00000474240 PDCD11Q14690 1871 aaKnown RBP-0.89□□□□□ -2.55
ECHDC1-213ENST00000474240 ITPR2Q14571 2701 aa-0.9□□□□□ -2.55
ECHDC1-213ENST00000474240 A0A0G2JND7 137 aa-0.9□□□□□ -2.55
ECHDC1-213ENST00000474240 SPRR2EP22531 72 aa-0.9□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms