RNA–Protein interactions for RNA: ENST00000473835.6

U2SURP-208, Transcript of U2 snRNP associated SURP domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene U2SURP, Length 7,276 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-208ENST00000473835 FAM229BQ4G0N7 80 aa3.22□□□□□ -1.89
U2SURP-208ENST00000473835 C6orf223Q8N319 242 aa3.22□□□□□ -1.89
U2SURP-208ENST00000473835 LINC00959A0A1B0GUT2 108 aa3.22□□□□□ -1.89
U2SURP-208ENST00000473835 PLA2G2AP14555 144 aa3.22□□□□□ -1.89
U2SURP-208ENST00000473835 C9orf66Q5T8R8 295 aa3.22□□□□□ -1.89
U2SURP-208ENST00000473835 Q6ZVQ6 151 aa3.22□□□□□ -1.89
U2SURP-208ENST00000473835 CHD8Q9HCK8 2581 aa3.22□□□□□ -1.89
U2SURP-208ENST00000473835 SNURFQ9Y675 71 aa3.22□□□□□ -1.89
U2SURP-208ENST00000473835 CHD6Q8TD26 2715 aa3.22□□□□□ -1.89
U2SURP-208ENST00000473835 LINC00575Q6W349 94 aa3.21□□□□□ -1.89
U2SURP-208ENST00000473835 TM2D3Q9BRN9 247 aa3.21□□□□□ -1.89
U2SURP-208ENST00000473835 TRBV6-8A0A0A6YYG3 113 aa3.21□□□□□ -1.9
U2SURP-208ENST00000473835 SETXQ7Z333 2677 aaKnown RBP3.21□□□□□ -1.9
U2SURP-208ENST00000473835 ZANQ9Y493 2812 aa3.21□□□□□ -1.9
U2SURP-208ENST00000473835 ZNF843Q8N446 348 aa3.21□□□□□ -1.9
U2SURP-208ENST00000473835 F8WEM9 126 aa3.21□□□□□ -1.9
U2SURP-208ENST00000473835 GNLYP22749 145 aa3.21□□□□□ -1.9
U2SURP-208ENST00000473835 Q8IZM0 81 aa3.21□□□□□ -1.9
U2SURP-208ENST00000473835 USP24Q9UPU5 2620 aa3.2□□□□□ -1.9
U2SURP-208ENST00000473835 TRBV7-6A0A0J9YX20 115 aa3.2□□□□□ -1.9
U2SURP-208ENST00000473835 RPL35AP18077 110 aaKnown RBP3.2□□□□□ -1.9
U2SURP-208ENST00000473835 C11orf68Q9H3H3 251 aaKnown RBP3.2□□□□□ -1.9
U2SURP-208ENST00000473835 NOP10Q9NPE3 64 aaKnown RBP3.2□□□□□ -1.9
U2SURP-208ENST00000473835 UBR5O95071 2799 aaPredicted RBP3.2□□□□□ -1.9
U2SURP-208ENST00000473835 CXCL6P80162 114 aa3.2□□□□□ -1.9
U2SURP-208ENST00000473835 CSNK1G2-AS1Q8NCQ2 148 aa3.2□□□□□ -1.9
U2SURP-208ENST00000473835 UBL5Q9BZL1 73 aa3.2□□□□□ -1.9
U2SURP-208ENST00000473835 ATRXP46100 2492 aa3.2□□□□□ -1.9
U2SURP-208ENST00000473835 SPTBN4Q9H254 2564 aa3.2□□□□□ -1.9
U2SURP-208ENST00000473835 UBE2L6O14933 153 aa3.2□□□□□ -1.9
U2SURP-208ENST00000473835 UTP20O75691 2785 aaKnown RBP3.2□□□□□ -1.9
U2SURP-208ENST00000473835 SMIM26A0A096LP01 95 aa3.2□□□□□ -1.9
U2SURP-208ENST00000473835 IGKV3OR2-268A0A0C4DH90 116 aa3.2□□□□□ -1.9
U2SURP-208ENST00000473835 B4DSR2 109 aa3.2□□□□□ -1.9
U2SURP-208ENST00000473835 IGHV4-28A0A0C4DH34 117 aa3.2□□□□□ -1.9
U2SURP-208ENST00000473835 F8WDY8 70 aa3.2□□□□□ -1.9
U2SURP-208ENST00000473835 C6orf99Q4VX62 202 aa3.2□□□□□ -1.9
U2SURP-208ENST00000473835 C4orf3Q8WVX3 66 aa3.2□□□□□ -1.9
U2SURP-208ENST00000473835 ACACBO00763 2458 aa3.2□□□□□ -1.9
U2SURP-208ENST00000473835 ZNF561-AS1K7EIQ3 104 aa3.19□□□□□ -1.9
U2SURP-208ENST00000473835 IGHV4-31P0DP07 118 aa3.19□□□□□ -1.9
U2SURP-208ENST00000473835 USP9XQ93008 2570 aaPredicted RBP3.19□□□□□ -1.9
U2SURP-208ENST00000473835 Q6YL49 198 aa3.19□□□□□ -1.9
U2SURP-208ENST00000473835 Q8N3U1 123 aa3.19□□□□□ -1.9
U2SURP-208ENST00000473835 CR1P17927 2039 aa3.19□□□□□ -1.9
U2SURP-208ENST00000473835 C9orf116Q5BN46 136 aaPredicted RBP3.19□□□□□ -1.9
U2SURP-208ENST00000473835 WFDC11Q8NEX6 87 aa3.19□□□□□ -1.9
U2SURP-208ENST00000473835 SPTAN1Q13813 2472 aaKnown RBP3.19□□□□□ -1.9
U2SURP-208ENST00000473835 IGLV6-57P01721 117 aa3.18□□□□□ -1.9
U2SURP-208ENST00000473835 RBM3P98179 157 aaKnown RBP3.18□□□□□ -1.9
U2SURP-208ENST00000473835 Q6ZTC4 211 aa3.18□□□□□ -1.9
U2SURP-208ENST00000473835 IGSF10Q6WRI0 2623 aa3.18□□□□□ -1.9
U2SURP-208ENST00000473835 C19orf73Q9NVV2 129 aa3.18□□□□□ -1.9
U2SURP-208ENST00000473835 COX17Q14061 63 aa3.18□□□□□ -1.9
U2SURP-208ENST00000473835 C6orf226Q5I0X4 101 aa3.18□□□□□ -1.9
U2SURP-208ENST00000473835 CCL19Q99731 98 aa3.18□□□□□ -1.9
U2SURP-208ENST00000473835 A0A0U1RQV1 116 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 A0A1B0GUV1 79 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 C11orf44Q8N8P7 122 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 MUC7Q8TAX7 377 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 CELA1Q9UNI1 258 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 MIFP14174 115 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 OCR1Q9BZK8 76 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 COL6A6A6NMZ7 2263 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 ERC2-IT1O76042 136 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 C10orf25Q5T742 122 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 LINC00612Q8N6U2 182 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 C16orf74Q96GX8 76 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 WFDC10AQ9H1F0 79 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 SORL1Q92673 2214 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 LRRK2Q5S007 2527 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 PKIGQ9Y2B9 76 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 ZNF462Q96JM2 2506 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 TRGV2A0A075B6R0 118 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 STHQ8IWL8 128 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 TMEM254Q8TBM7 123 aa3.17□□□□□ -1.9
U2SURP-208ENST00000473835 BBC3Q96PG8 261 aaPredicted RBP3.17□□□□□ -1.9
U2SURP-208ENST00000473835 IGKV4-1P06312 121 aa3.16□□□□□ -1.9
U2SURP-208ENST00000473835 HAMPP81172 84 aa3.16□□□□□ -1.9
U2SURP-208ENST00000473835 NREPQ16612 68 aa3.16□□□□□ -1.9
U2SURP-208ENST00000473835 Q6ZQY7 126 aa3.16□□□□□ -1.9
U2SURP-208ENST00000473835 C1orf43Q9BWL3 253 aa3.16□□□□□ -1.9
U2SURP-208ENST00000473835 EPG5Q9HCE0 2579 aa3.16□□□□□ -1.9
U2SURP-208ENST00000473835 NDUFC1O43677 76 aa3.16□□□□□ -1.9
U2SURP-208ENST00000473835 SCXQ7RTU7 201 aa3.16□□□□□ -1.9
U2SURP-208ENST00000473835 TRGV4A0A0C4DH28 118 aa3.16□□□□□ -1.9
U2SURP-208ENST00000473835 ESM1Q9NQ30 184 aa3.16□□□□□ -1.9
U2SURP-208ENST00000473835 LCE6AA0A183 80 aa3.15□□□□□ -1.9
U2SURP-208ENST00000473835 RNASE1P07998 156 aaKnown RBP3.15□□□□□ -1.9
U2SURP-208ENST00000473835 IGHV4-30-4P0DP06 118 aa3.15□□□□□ -1.9
U2SURP-208ENST00000473835 HIVEP3Q5T1R4 2406 aa3.15□□□□□ -1.9
U2SURP-208ENST00000473835 ATP5EP56381 51 aaPredicted RBP3.15□□□□□ -1.9
U2SURP-208ENST00000473835 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.15□□□□□ -1.91e-7■■■■■ 43.7
U2SURP-208ENST00000473835 CLPSL2Q6UWE3 100 aa3.15□□□□□ -1.9
U2SURP-208ENST00000473835 CD164L2Q6UWJ8 174 aa3.15□□□□□ -1.9
U2SURP-208ENST00000473835 KRTAP1-3Q8IUG1 177 aa3.15□□□□□ -1.9
U2SURP-208ENST00000473835 LINC00269Q8N2A0 174 aa3.15□□□□□ -1.9
U2SURP-208ENST00000473835 DYNLRB2Q8TF09 96 aa3.15□□□□□ -1.91
U2SURP-208ENST00000473835 BPY2O14599 106 aa3.15□□□□□ -1.91
U2SURP-208ENST00000473835 LINC01356Q8N9X3 169 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 926.3 ms