RNA–Protein interactions for RNA: ENST00000473322.1

CCDC66-215, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-215ENST00000473322 CLTCQ00610 1675 aaKnown RBP0.59□□□□□ -2.31
CCDC66-215ENST00000473322 ABCC3O15438 1527 aa0.59□□□□□ -2.31
CCDC66-215ENST00000473322 CUX1P39880 1505 aa0.59□□□□□ -2.31
CCDC66-215ENST00000473322 C2CD3Q4AC94 2353 aa0.59□□□□□ -2.31
CCDC66-215ENST00000473322 H0Y9P7 68 aa0.59□□□□□ -2.31
CCDC66-215ENST00000473322 EDC4Q6P2E9 1401 aaKnown RBP0.58□□□□□ -2.32
CCDC66-215ENST00000473322 ETDBQ3ZM63 59 aa0.58□□□□□ -2.32
CCDC66-215ENST00000473322 FDCSPQ8NFU4 85 aa0.58□□□□□ -2.32
CCDC66-215ENST00000473322 LCN9Q8WX39 176 aa0.58□□□□□ -2.32
CCDC66-215ENST00000473322 GOLGA4Q13439 2230 aaKnown RBP0.58□□□□□ -2.32
CCDC66-215ENST00000473322 SHPRHQ149N8 1683 aa0.58□□□□□ -2.32
CCDC66-215ENST00000473322 ANKRD17O75179 2603 aaKnown RBP0.58□□□□□ -2.32
CCDC66-215ENST00000473322 USP24Q9UPU5 2620 aa0.57□□□□□ -2.32
CCDC66-215ENST00000473322 C20orf78Q9BR46 151 aa0.57□□□□□ -2.32
CCDC66-215ENST00000473322 MUC5BQ9HC84 5762 aaPredicted RBP0.56□□□□□ -2.32
CCDC66-215ENST00000473322 SMIM11AP58511 58 aa0.56□□□□□ -2.32
CCDC66-215ENST00000473322 HIGD1BQ9P298 99 aa0.56□□□□□ -2.32
CCDC66-215ENST00000473322 PLIN4Q96Q06 1357 aa0.56□□□□□ -2.32
CCDC66-215ENST00000473322 C6orf201Q7Z4U5 140 aa0.55□□□□□ -2.32
CCDC66-215ENST00000473322 TARBP1Q13395 1621 aaKnown RBP0.55□□□□□ -2.32
CCDC66-215ENST00000473322 CCDC141Q6ZP82 1450 aa0.54□□□□□ -2.32
CCDC66-215ENST00000473322 RB1CC1Q8TDY2 1594 aa0.54□□□□□ -2.32
CCDC66-215ENST00000473322 F8WEM9 126 aa0.54□□□□□ -2.32
CCDC66-215ENST00000473322 COX6B1P14854 86 aa0.54□□□□□ -2.32
CCDC66-215ENST00000473322 C9orf62Q8N4C0 152 aa0.54□□□□□ -2.32
CCDC66-215ENST00000473322 PSENENQ9NZ42 101 aa0.54□□□□□ -2.32
CCDC66-215ENST00000473322 RABAC1Q9UI14 185 aa0.54□□□□□ -2.32
CCDC66-215ENST00000473322 OTOGQ6ZRI0 2925 aa0.54□□□□□ -2.32
CCDC66-215ENST00000473322 ZNF292O60281 2723 aa0.53□□□□□ -2.32
CCDC66-215ENST00000473322 KIAA1551Q9HCM1 1747 aa0.53□□□□□ -2.32
CCDC66-215ENST00000473322 A0A1B0GU69 56 aa0.53□□□□□ -2.32
CCDC66-215ENST00000473322 K7EP34 96 aa0.52□□□□□ -2.33
CCDC66-215ENST00000473322 K7EQZ3 153 aa0.52□□□□□ -2.33
CCDC66-215ENST00000473322 HMGN2P05204 90 aaKnown RBP0.52□□□□□ -2.33
CCDC66-215ENST00000473322 DEFB107AQ8IZN7 70 aa0.52□□□□□ -2.33
CCDC66-215ENST00000473322 USMG5Q96IX5 58 aa0.52□□□□□ -2.33
CCDC66-215ENST00000473322 U3KQA8 63 aa0.52□□□□□ -2.33
CCDC66-215ENST00000473322 PIEZO2Q9H5I5 2752 aa0.52□□□□□ -2.33
CCDC66-215ENST00000473322 SAMD9Q5K651 1589 aa0.52□□□□□ -2.33
CCDC66-215ENST00000473322 SYNE1Q8NF91 8797 aaKnown RBP0.52□□□□□ -2.33
CCDC66-215ENST00000473322 D6R8Y8 96 aa0.51□□□□□ -2.33
CCDC66-215ENST00000473322 MUSTN1Q8IVN3 82 aa0.51□□□□□ -2.33
CCDC66-215ENST00000473322 MYO3AQ8NEV4 1616 aa0.51□□□□□ -2.33
CCDC66-215ENST00000473322 ZFYVE26Q68DK2 2539 aa0.5□□□□□ -2.33
CCDC66-215ENST00000473322 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
CCDC66-215ENST00000473322 GNGT1P63211 74 aa0.5□□□□□ -2.33
CCDC66-215ENST00000473322 NAV2Q8IVL1 2488 aa0.5□□□□□ -2.33
CCDC66-215ENST00000473322 PLCE1Q9P212 2302 aa0.5□□□□□ -2.33
CCDC66-215ENST00000473322 CSMD3Q7Z407 3707 aa0.5□□□□□ -2.33
CCDC66-215ENST00000473322 KNDC1Q76NI1 1749 aa0.5□□□□□ -2.33
CCDC66-215ENST00000473322 KIAA0556O60303 1618 aa0.49□□□□□ -2.33
CCDC66-215ENST00000473322 LRP1Q07954 4544 aaKnown RBP0.49□□□□□ -2.33
CCDC66-215ENST00000473322 FXYD6-FXYD2A0A087WZ82 144 aa0.49□□□□□ -2.33
CCDC66-215ENST00000473322 LEPROTL1O95214 131 aa0.49□□□□□ -2.33
CCDC66-215ENST00000473322 CFDP00746 253 aaPredicted RBP0.49□□□□□ -2.33
CCDC66-215ENST00000473322 SPRR1AP35321 89 aa0.49□□□□□ -2.33
CCDC66-215ENST00000473322 PEA15Q15121 130 aa0.49□□□□□ -2.33
CCDC66-215ENST00000473322 UBE2D4Q9Y2X8 147 aa0.49□□□□□ -2.33
CCDC66-215ENST00000473322 PAPPA2Q9BXP8 1791 aa0.49□□□□□ -2.33
CCDC66-215ENST00000473322 MON2Q7Z3U7 1717 aa0.49□□□□□ -2.33
CCDC66-215ENST00000473322 DNAJC13O75165 2243 aa0.49□□□□□ -2.33
CCDC66-215ENST00000473322 LRRC37AA6NMS7 1700 aa0.48□□□□□ -2.33
CCDC66-215ENST00000473322 PPRC1Q5VV67 1664 aaKnown RBP0.47□□□□□ -2.33
CCDC66-215ENST00000473322 COX8AP10176 69 aa0.47□□□□□ -2.33
CCDC66-215ENST00000473322 MED14O60244 1454 aa0.47□□□□□ -2.33
CCDC66-215ENST00000473322 UNC79Q9P2D8 2635 aa0.47□□□□□ -2.33
CCDC66-215ENST00000473322 PTPRZ1P23471 2315 aaPredicted RBP0.47□□□□□ -2.33
CCDC66-215ENST00000473322 DEFB109BQ30KR1 87 aa0.46□□□□□ -2.34
CCDC66-215ENST00000473322 NMSQ5H8A3 153 aa0.46□□□□□ -2.34
CCDC66-215ENST00000473322 S100A16Q96FQ6 103 aaKnown RBP0.46□□□□□ -2.34
CCDC66-215ENST00000473322 SLIT1O75093 1534 aa0.46□□□□□ -2.34
CCDC66-215ENST00000473322 USF3Q68DE3 2245 aa0.46□□□□□ -2.34
CCDC66-215ENST00000473322 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
CCDC66-215ENST00000473322 IGLC3P0DOY3 106 aa0.45□□□□□ -2.34
CCDC66-215ENST00000473322 SPRR1BP22528 89 aa0.45□□□□□ -2.34
CCDC66-215ENST00000473322 SNRPFP62306 86 aaKnown RBP0.45□□□□□ -2.34
CCDC66-215ENST00000473322 C5P01031 1676 aa0.45□□□□□ -2.34
CCDC66-215ENST00000473322 LRRC9Q6ZRR7 1453 aa0.44□□□□□ -2.34
CCDC66-215ENST00000473322 CYB5AP00167 134 aa0.44□□□□□ -2.34
CCDC66-215ENST00000473322 UACAQ9BZF9 1416 aa0.44□□□□□ -2.34
CCDC66-215ENST00000473322 NEXMIFQ5QGS0 1516 aa0.43□□□□□ -2.34
CCDC66-215ENST00000473322 MDN1Q9NU22 5596 aa0.43□□□□□ -2.34
CCDC66-215ENST00000473322 IGLC2P0DOY2 106 aa0.43□□□□□ -2.34
CCDC66-215ENST00000473322 CRYBG1Q9Y4K1 1723 aa0.43□□□□□ -2.34
CCDC66-215ENST00000473322 RGPD4Q7Z3J3 1758 aa0.42□□□□□ -2.34
CCDC66-215ENST00000473322 ALKQ9UM73 1620 aa0.42□□□□□ -2.34
CCDC66-215ENST00000473322 TENM4Q6N022 2769 aa0.42□□□□□ -2.34
CCDC66-215ENST00000473322 ACYP1P07311 99 aa0.42□□□□□ -2.34
CCDC66-215ENST00000473322 FAT4Q6V0I7 4981 aa0.42□□□□□ -2.34
CCDC66-215ENST00000473322 MYH4Q9Y623 1939 aa0.42□□□□□ -2.34
CCDC66-215ENST00000473322 AKAP6Q13023 2319 aa0.42□□□□□ -2.34
CCDC66-215ENST00000473322 ATP7BP35670 1465 aa0.41□□□□□ -2.34
CCDC66-215ENST00000473322 IGF2RP11717 2491 aa0.41□□□□□ -2.34
CCDC66-215ENST00000473322 PLGLAQ15195 96 aa0.41□□□□□ -2.34
CCDC66-215ENST00000473322 LINC00643Q86TS7 51 aa0.41□□□□□ -2.34
CCDC66-215ENST00000473322 CRIPTQ9P021 101 aa0.41□□□□□ -2.34
CCDC66-215ENST00000473322 NKTRP30414 1462 aaKnown RBP0.41□□□□□ -2.34
CCDC66-215ENST00000473322 PPLO60437 1756 aa0.4□□□□□ -2.35
CCDC66-215ENST00000473322 PKDREJQ9NTG1 2253 aa0.39□□□□□ -2.35
CCDC66-215ENST00000473322 MAP3K4Q9Y6R4 1608 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms