RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 MAGI1Q96QZ7 1491 aaPredicted RBP-0.67□□□□□ -2.52
CLCC1-208ENST00000473062 MBD5Q9P267 1494 aa-0.67□□□□□ -2.52
CLCC1-208ENST00000473062 DNAH2Q9P225 4427 aa-0.68□□□□□ -2.52
CLCC1-208ENST00000473062 MYOM1P52179 1685 aa-0.68□□□□□ -2.52
CLCC1-208ENST00000473062 PLECQ15149 4684 aaKnown RBP-0.68□□□□□ -2.52
CLCC1-208ENST00000473062 LINC00959A0A1B0GUT2 108 aa-0.68□□□□□ -2.52
CLCC1-208ENST00000473062 A0A1B0GWA3 101 aa-0.68□□□□□ -2.52
CLCC1-208ENST00000473062 TRAPPC2P0DI81 140 aa-0.68□□□□□ -2.52
CLCC1-208ENST00000473062 TRAPPC2BP0DI82 140 aa-0.68□□□□□ -2.52
CLCC1-208ENST00000473062 FAM223AQ8IWN6 122 aa-0.68□□□□□ -2.52
CLCC1-208ENST00000473062 A2ML1A8K2U0 1454 aa-0.68□□□□□ -2.52
CLCC1-208ENST00000473062 MYO18BQ8IUG5 2567 aa-0.68□□□□□ -2.52
CLCC1-208ENST00000473062 HMGXB3Q12766 1538 aa-0.69□□□□□ -2.52
CLCC1-208ENST00000473062 TULP4Q9NRJ4 1543 aa-0.69□□□□□ -2.52
CLCC1-208ENST00000473062 NAP1L6A6NFF2 107 aa-0.69□□□□□ -2.52
CLCC1-208ENST00000473062 OOSP1A8MZH6 123 aa-0.69□□□□□ -2.52
CLCC1-208ENST00000473062 H0YGG7 62 aa-0.69□□□□□ -2.52
CLCC1-208ENST00000473062 LINC01600Q96MT4 127 aa-0.69□□□□□ -2.52
CLCC1-208ENST00000473062 LINC00474Q9P2X8 69 aa-0.69□□□□□ -2.52
CLCC1-208ENST00000473062 CCDC141Q6ZP82 1450 aa-0.69□□□□□ -2.52
CLCC1-208ENST00000473062 SONP18583 2426 aaKnown RBP-0.69□□□□□ -2.52
CLCC1-208ENST00000473062 C9orf62Q8N4C0 152 aa-0.7□□□□□ -2.52
CLCC1-208ENST00000473062 C12orf57Q99622 126 aa-0.7□□□□□ -2.52
CLCC1-208ENST00000473062 MANBALQ9NQG1 85 aa-0.7□□□□□ -2.52
CLCC1-208ENST00000473062 IER3IP1Q9Y5U9 82 aa-0.7□□□□□ -2.52
CLCC1-208ENST00000473062 ZFHX3Q15911 3703 aa-0.7□□□□□ -2.52
CLCC1-208ENST00000473062 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.7□□□□□ -2.52
CLCC1-208ENST00000473062 KNL1Q8NG31 2342 aa-0.7□□□□□ -2.52
CLCC1-208ENST00000473062 NBASA2RRP1 2371 aa-0.7□□□□□ -2.52
CLCC1-208ENST00000473062 DNAH11Q96DT5 4516 aa-0.7□□□□□ -2.52
CLCC1-208ENST00000473062 KDM5AP29375 1690 aaKnown RBP-0.71□□□□□ -2.52
CLCC1-208ENST00000473062 LOC100130705A0A1B0GUX0 176 aa-0.71□□□□□ -2.52
CLCC1-208ENST00000473062 SNAPC5O75971 98 aa-0.71□□□□□ -2.52
CLCC1-208ENST00000473062 H1FX-AS1Q4G0G2 97 aa-0.71□□□□□ -2.52
CLCC1-208ENST00000473062 SVBPQ8N300 66 aa-0.71□□□□□ -2.52
CLCC1-208ENST00000473062 DPH3P1Q9H4G8 78 aa-0.71□□□□□ -2.52
CLCC1-208ENST00000473062 PRO1854Q9UHT4 67 aa-0.71□□□□□ -2.52
CLCC1-208ENST00000473062 KIAA0556O60303 1618 aa-0.71□□□□□ -2.52
CLCC1-208ENST00000473062 EFCAB10A6NFE3 127 aa-0.72□□□□□ -2.52
CLCC1-208ENST00000473062 SAA2P0DJI9 122 aaPredicted RBP-0.72□□□□□ -2.52
CLCC1-208ENST00000473062 SEC11AP67812 179 aa-0.72□□□□□ -2.52
CLCC1-208ENST00000473062 RPL13AP3Q6NVV1 102 aa-0.72□□□□□ -2.52
CLCC1-208ENST00000473062 LINC00846Q9NV44 126 aa-0.72□□□□□ -2.52
CLCC1-208ENST00000473062 CRIPTQ9P021 101 aa-0.72□□□□□ -2.52
CLCC1-208ENST00000473062 PRRC2CQ9Y520 2896 aaKnown RBP-0.73□□□□□ -2.53
CLCC1-208ENST00000473062 APOBP04114 4563 aaKnown RBP-0.73□□□□□ -2.53
CLCC1-208ENST00000473062 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.73□□□□□ -2.53
CLCC1-208ENST00000473062 H3BQ15 152 aa-0.73□□□□□ -2.53
CLCC1-208ENST00000473062 I3L3M4 83 aa-0.73□□□□□ -2.53
CLCC1-208ENST00000473062 KRTDAPP60985 99 aa-0.73□□□□□ -2.53
CLCC1-208ENST00000473062 UBE2D3P61077 147 aa-0.73□□□□□ -2.53
CLCC1-208ENST00000473062 UBE2D2P62837 147 aa-0.73□□□□□ -2.53
CLCC1-208ENST00000473062 SFTA2Q6UW10 78 aa-0.73□□□□□ -2.53
CLCC1-208ENST00000473062 LCN9Q8WX39 176 aa-0.73□□□□□ -2.53
CLCC1-208ENST00000473062 ROCK2O75116 1388 aaKnown RBP-0.73□□□□□ -2.53
CLCC1-208ENST00000473062 EHBP1L1Q8N3D4 1523 aa-0.74□□□□□ -2.53
CLCC1-208ENST00000473062 Q0VG73 95 aa-0.74□□□□□ -2.53
CLCC1-208ENST00000473062 HEPN1Q6WQI6 88 aa-0.74□□□□□ -2.53
CLCC1-208ENST00000473062 SPRR2FQ96RM1 72 aa-0.74□□□□□ -2.53
CLCC1-208ENST00000473062 AKAP13Q12802 2813 aa-0.74□□□□□ -2.53
CLCC1-208ENST00000473062 PSME4Q14997 1843 aa-0.74□□□□□ -2.53
CLCC1-208ENST00000473062 MYH7P12883 1935 aa-0.74□□□□□ -2.53
CLCC1-208ENST00000473062 HTTP42858 3142 aa-0.74□□□□□ -2.53
CLCC1-208ENST00000473062 LYSTQ99698 3801 aa-0.74□□□□□ -2.53
CLCC1-208ENST00000473062 SLIT1O75093 1534 aa-0.74□□□□□ -2.53
CLCC1-208ENST00000473062 TRAV30A0A087WSZ9 112 aa-0.75□□□□□ -2.53
CLCC1-208ENST00000473062 SNCAP37840 140 aa-0.75□□□□□ -2.53
CLCC1-208ENST00000473062 GNG4P50150 75 aa-0.75□□□□□ -2.53
CLCC1-208ENST00000473062 RYR2Q92736 4967 aa-0.75□□□□□ -2.53
CLCC1-208ENST00000473062 ANK3Q12955 4377 aaKnown RBP-0.76□□□□□ -2.53
CLCC1-208ENST00000473062 TEP1Q99973 2627 aaKnown RBP-0.76□□□□□ -2.53
CLCC1-208ENST00000473062 A0A1B0GU69 56 aa-0.76□□□□□ -2.53
CLCC1-208ENST00000473062 SCAPERQ9BY12 1400 aa-0.76□□□□□ -2.53
CLCC1-208ENST00000473062 C1orf167Q5SNV9 1468 aa-0.76□□□□□ -2.53
CLCC1-208ENST00000473062 VPS13BQ7Z7G8 4022 aa-0.77□□□□□ -2.53
CLCC1-208ENST00000473062 NLRP1Q9C000 1473 aa-0.77□□□□□ -2.53
CLCC1-208ENST00000473062 FAM223BA6NKX1 122 aa-0.77□□□□□ -2.53
CLCC1-208ENST00000473062 H3BNG1 76 aa-0.77□□□□□ -2.53
CLCC1-208ENST00000473062 VAMP8Q9BV40 100 aa-0.77□□□□□ -2.53
CLCC1-208ENST00000473062 RNF213Q63HN8 5207 aa-0.77□□□□□ -2.53
CLCC1-208ENST00000473062 ACACAQ13085 2346 aa-0.77□□□□□ -2.53
CLCC1-208ENST00000473062 TCHHQ07283 1943 aa-0.77□□□□□ -2.53
CLCC1-208ENST00000473062 DNAH1Q9P2D7 4330 aa-0.78□□□□□ -2.53
CLCC1-208ENST00000473062 FMN2Q9NZ56 1722 aa-0.78□□□□□ -2.53
CLCC1-208ENST00000473062 TET3O43151 1660 aa-0.78□□□□□ -2.53
CLCC1-208ENST00000473062 DNHD1Q96M86 4753 aa-0.78□□□□□ -2.53
CLCC1-208ENST00000473062 NKTRP30414 1462 aaKnown RBP-0.78□□□□□ -2.53
CLCC1-208ENST00000473062 MYOM2P54296 1465 aa-0.78□□□□□ -2.53
CLCC1-208ENST00000473062 PPP3R1P63098 170 aa-0.78□□□□□ -2.53
CLCC1-208ENST00000473062 C6orf201Q7Z4U5 140 aa-0.78□□□□□ -2.53
CLCC1-208ENST00000473062 CGREF1Q99674 301 aa-0.78□□□□□ -2.53
CLCC1-208ENST00000473062 TRANK1O15050 2925 aa-0.78□□□□□ -2.53
CLCC1-208ENST00000473062 A0A0G2JMZ2 1700 aa-0.78□□□□□ -2.53
CLCC1-208ENST00000473062 PHLPP1O60346 1717 aa-0.78□□□□□ -2.53
CLCC1-208ENST00000473062 DIP2CQ9Y2E4 1556 aa-0.79□□□□□ -2.54
CLCC1-208ENST00000473062 CCL22O00626 93 aa-0.79□□□□□ -2.54
CLCC1-208ENST00000473062 MRPS10P82664 201 aaKnown RBP-0.79□□□□□ -2.54
CLCC1-208ENST00000473062 MRPL34Q9BQ48 92 aaKnown RBP-0.79□□□□□ -2.54
CLCC1-208ENST00000473062 CDKN2A-AS1Q9UH64 79 aa-0.79□□□□□ -2.54
CLCC1-208ENST00000473062 MGAM2Q2M2H8 2515 aa-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms