RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 LINC00469Q8N7U9 141 aa5.88□□□□□ -1.47
SMC4-214ENST00000472991 IFI27L1Q96BM0 104 aa5.88□□□□□ -1.47
SMC4-214ENST00000472991 CDKN2A-AS1Q9UH64 79 aa5.88□□□□□ -1.47
SMC4-214ENST00000472991 IGLV4-69A0A075B6H9 119 aa5.87□□□□□ -1.47
SMC4-214ENST00000472991 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.87□□□□□ -1.47
SMC4-214ENST00000472991 TINCRA0A1B0GVN0 87 aa5.87□□□□□ -1.47
SMC4-214ENST00000472991 LEPROTL1O95214 131 aa5.87□□□□□ -1.47
SMC4-214ENST00000472991 FABP4P15090 132 aa5.87□□□□□ -1.47
SMC4-214ENST00000472991 C9orf163Q8N9P6 203 aa5.87□□□□□ -1.47
SMC4-214ENST00000472991 OR10D4PQ8NGN7 298 aa5.87□□□□□ -1.47
SMC4-214ENST00000472991 CARD19Q96LW7 228 aa5.87□□□□□ -1.47
SMC4-214ENST00000472991 CHAC1Q9BUX1 264 aa5.87□□□□□ -1.47
SMC4-214ENST00000472991 IGLV5-45A0A087WSX0 123 aa5.86□□□□□ -1.47
SMC4-214ENST00000472991 H0Y8G0 127 aa5.86□□□□□ -1.47
SMC4-214ENST00000472991 IGLC3P0DOY3 106 aa5.86□□□□□ -1.47
SMC4-214ENST00000472991 LINC01561Q8N1V8 128 aa5.86□□□□□ -1.47
SMC4-214ENST00000472991 PACRGQ96M98 296 aaPredicted RBP5.86□□□□□ -1.47
SMC4-214ENST00000472991 CHTOPQ9Y3Y2 248 aaKnown RBP5.86□□□□□ -1.47
SMC4-214ENST00000472991 RYR1P21817 5038 aa5.85□□□□□ -1.47
SMC4-214ENST00000472991 TRAV12-1A0A0B4J245 112 aa5.85□□□□□ -1.47
SMC4-214ENST00000472991 C11orf86A6NJI1 115 aa5.85□□□□□ -1.47
SMC4-214ENST00000472991 SMIM1B2RUZ4 78 aa5.85□□□□□ -1.47
SMC4-214ENST00000472991 ZNF22P17026 224 aaPredicted RBP5.85□□□□□ -1.47
SMC4-214ENST00000472991 SYCNQ0VAF6 134 aa5.85□□□□□ -1.47
SMC4-214ENST00000472991 COA6Q5JTJ3 125 aaKnown RBP5.85□□□□□ -1.47
SMC4-214ENST00000472991 Q6ZRU5 148 aa5.85□□□□□ -1.47
SMC4-214ENST00000472991 C2orf48Q96LS8 159 aa5.85□□□□□ -1.47
SMC4-214ENST00000472991 CAMK2N2Q96S95 79 aa5.85□□□□□ -1.47
SMC4-214ENST00000472991 FAM30AQ9NZY2 134 aa5.85□□□□□ -1.47
SMC4-214ENST00000472991 TOMM7Q9P0U1 55 aa5.85□□□□□ -1.47
SMC4-214ENST00000472991 HSPB8Q9UJY1 196 aa5.85□□□□□ -1.47
SMC4-214ENST00000472991 KIAA1109Q2LD37 5005 aa5.85□□□□□ -1.47
SMC4-214ENST00000472991 HSPG2P98160 4391 aa5.84□□□□□ -1.47
SMC4-214ENST00000472991 F8VRH5 84 aa5.84□□□□□ -1.47
SMC4-214ENST00000472991 CDK2AP2O75956 126 aa5.84□□□□□ -1.47
SMC4-214ENST00000472991 SPINK8P0C7L1 97 aa5.84□□□□□ -1.47
SMC4-214ENST00000472991 HAMPP81172 84 aa5.84□□□□□ -1.47
SMC4-214ENST00000472991 KIAA0087Q14695 138 aa5.84□□□□□ -1.47
SMC4-214ENST00000472991 H3BRM9 83 aa5.83□□□□□ -1.48
SMC4-214ENST00000472991 NDUFA1O15239 70 aa5.83□□□□□ -1.48
SMC4-214ENST00000472991 PRSS2P07478 247 aa5.83□□□□□ -1.48
SMC4-214ENST00000472991 ODF1Q14990 250 aa5.83□□□□□ -1.48
SMC4-214ENST00000472991 TMEM170BQ5T4T1 132 aa5.83□□□□□ -1.48
SMC4-214ENST00000472991 SDIM1Q6ZPB5 146 aa5.83□□□□□ -1.48
SMC4-214ENST00000472991 Q6ZSA8 131 aa5.83□□□□□ -1.48
SMC4-214ENST00000472991 Q8IZM0 81 aa5.83□□□□□ -1.48
SMC4-214ENST00000472991 MRPL35Q9NZE8 188 aaKnown RBP5.83□□□□□ -1.48
SMC4-214ENST00000472991 CHTF8P0CG12 524 aa5.82□□□□□ -1.48
SMC4-214ENST00000472991 XGP55808 180 aa5.82□□□□□ -1.48
SMC4-214ENST00000472991 C10orf25Q5T742 122 aa5.82□□□□□ -1.48
SMC4-214ENST00000472991 C2orf82Q6UX34 121 aa5.82□□□□□ -1.48
SMC4-214ENST00000472991 UNQ6190/PRO20217Q6UXQ8 127 aa5.82□□□□□ -1.48
SMC4-214ENST00000472991 MAP1LC3CQ9BXW4 147 aa5.82□□□□□ -1.48
SMC4-214ENST00000472991 A0A096LNI7 61 aa5.81□□□□□ -1.48
SMC4-214ENST00000472991 F8WDY8 70 aa5.81□□□□□ -1.48
SMC4-214ENST00000472991 PANO1I0J062 215 aa5.81□□□□□ -1.48
SMC4-214ENST00000472991 C6orf226Q5I0X4 101 aa5.81□□□□□ -1.48
SMC4-214ENST00000472991 COX7B2Q8TF08 81 aa5.81□□□□□ -1.48
SMC4-214ENST00000472991 C6orf48Q9UBA6 75 aa5.81□□□□□ -1.48
SMC4-214ENST00000472991 IGKV2-24A0A0C4DH68 120 aa5.8□□□□□ -1.48
SMC4-214ENST00000472991 IGLV5-39A0A0G2JS06 123 aa5.8□□□□□ -1.48
SMC4-214ENST00000472991 LOC107984640A0A0U1RRK4 108 aa5.8□□□□□ -1.48
SMC4-214ENST00000472991 CKS1BP61024 79 aa5.8□□□□□ -1.48
SMC4-214ENST00000472991 RPL18AQ02543 176 aaKnown RBP5.8□□□□□ -1.48
SMC4-214ENST00000472991 SCXQ7RTU7 201 aa5.8□□□□□ -1.48
SMC4-214ENST00000472991 PMCHL2Q9BQD1 86 aa5.8□□□□□ -1.48
SMC4-214ENST00000472991 PKIGQ9Y2B9 76 aa5.8□□□□□ -1.48
SMC4-214ENST00000472991 HERC2O95714 4834 aa5.79□□□□□ -1.48
SMC4-214ENST00000472991 TRBV30A0A0K0K1B3 111 aa5.79□□□□□ -1.48
SMC4-214ENST00000472991 TMEM223A0PJW6 202 aa5.79□□□□□ -1.48
SMC4-214ENST00000472991 SYS1-DBNDD2H3BUS1 97 aa5.79□□□□□ -1.48
SMC4-214ENST00000472991 S100A6P06703 90 aa5.79□□□□□ -1.48
SMC4-214ENST00000472991 CXCL5P42830 114 aa5.79□□□□□ -1.48
SMC4-214ENST00000472991 CIRBPQ14011 172 aaKnown RBP5.79□□□□□ -1.48
SMC4-214ENST00000472991 SPACA4Q8TDM5 124 aa5.79□□□□□ -1.48
SMC4-214ENST00000472991 DPM2O94777 84 aa5.78□□□□□ -1.48
SMC4-214ENST00000472991 IGKCP01834 107 aa5.78□□□□□ -1.48
SMC4-214ENST00000472991 C3orf79P0CE67 100 aa5.78□□□□□ -1.48
SMC4-214ENST00000472991 PLNP26678 52 aa5.78□□□□□ -1.48
SMC4-214ENST00000472991 GAGE2BQ13066 116 aa5.78□□□□□ -1.48
SMC4-214ENST00000472991 MAJINQ3KP22 176 aa5.78□□□□□ -1.48
SMC4-214ENST00000472991 C9orf116Q5BN46 136 aaPredicted RBP5.78□□□□□ -1.48
SMC4-214ENST00000472991 HIST3H2BBQ8N257 126 aa5.78□□□□□ -1.48
SMC4-214ENST00000472991 A0A087WYN8 130 aa5.77□□□□□ -1.49
SMC4-214ENST00000472991 S100A2P29034 98 aa5.77□□□□□ -1.49
SMC4-214ENST00000472991 PTTG1IPP53801 180 aa5.77□□□□□ -1.49
SMC4-214ENST00000472991 KRTDAPP60985 99 aa5.77□□□□□ -1.49
SMC4-214ENST00000472991 LINC01545Q5VT33 79 aa5.77□□□□□ -1.49
SMC4-214ENST00000472991 PET117Q6UWS5 81 aa5.77□□□□□ -1.49
SMC4-214ENST00000472991 CIRBP-AS1Q8TBR5 109 aa5.77□□□□□ -1.49
SMC4-214ENST00000472991 VPS13BQ7Z7G8 4022 aa5.77□□□□□ -1.49
SMC4-214ENST00000472991 SMR3BP02814 79 aaPredicted RBP5.76□□□□□ -1.49
SMC4-214ENST00000472991 TLX1NBP0CAT3 122 aa5.76□□□□□ -1.49
SMC4-214ENST00000472991 Q6ZRP5 223 aa5.76□□□□□ -1.49
SMC4-214ENST00000472991 DPH3Q96FX2 82 aa5.76□□□□□ -1.49
SMC4-214ENST00000472991 NDUFC2-KCTD14E9PQ53 114 aa5.75□□□□□ -1.49
SMC4-214ENST00000472991 HERVK_113P61574 105 aa5.75□□□□□ -1.49
SMC4-214ENST00000472991 SNRPEP62304 92 aaKnown RBP5.75□□□□□ -1.49
SMC4-214ENST00000472991 GAGE2EQ4V326 116 aa5.75□□□□□ -1.49
SMC4-214ENST00000472991 STPG4Q8N801 248 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms