RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 CTDSP1Q9GZU7 261 aa9.29□□□□□ -0.92
VTI1A-203ENST00000472892 G0S2P27469 103 aa9.28□□□□□ -0.92
VTI1A-203ENST00000472892 CLLU1Q5K131 121 aa9.28□□□□□ -0.92
VTI1A-203ENST00000472892 M0QXV9 152 aa9.27□□□□□ -0.93
VTI1A-203ENST00000472892 H0Y9J4 135 aa9.26□□□□□ -0.93
VTI1A-203ENST00000472892 PRSS2P07478 247 aa9.26□□□□□ -0.93
VTI1A-203ENST00000472892 CKS1BP61024 79 aa9.26□□□□□ -0.93
VTI1A-203ENST00000472892 SEC11AP67812 179 aa9.26□□□□□ -0.93
VTI1A-203ENST00000472892 C6orf226Q5I0X4 101 aa9.26□□□□□ -0.93
VTI1A-203ENST00000472892 PAPPA-AS1Q5QFB9 102 aa9.26□□□□□ -0.93
VTI1A-203ENST00000472892 Q8IZM0 81 aa9.26□□□□□ -0.93
VTI1A-203ENST00000472892 TIMM17AQ99595 171 aa9.26□□□□□ -0.93
VTI1A-203ENST00000472892 HERVK_113P63121 156 aa9.25□□□□□ -0.93
VTI1A-203ENST00000472892 TOMM6Q96B49 74 aa9.25□□□□□ -0.93
VTI1A-203ENST00000472892 TOMM7Q9P0U1 55 aa9.25□□□□□ -0.93
VTI1A-203ENST00000472892 CDKN2A-AS1Q9UH64 79 aa9.25□□□□□ -0.93
VTI1A-203ENST00000472892 ADCYAP1P18509 176 aa9.24□□□□□ -0.93
VTI1A-203ENST00000472892 UBE2BP63146 152 aa9.24□□□□□ -0.93
VTI1A-203ENST00000472892 KIAA1644Q3SXP7 199 aa9.24□□□□□ -0.93
VTI1A-203ENST00000472892 PRR26Q8N8Z3 221 aa9.24□□□□□ -0.93
VTI1A-203ENST00000472892 ALKBH7Q9BT30 221 aaPredicted RBP9.24□□□□□ -0.93
VTI1A-203ENST00000472892 KRTAP9-2Q9BYQ4 174 aa9.24□□□□□ -0.93
VTI1A-203ENST00000472892 TRAV9-1A0A075B6T8 112 aa9.23□□□□□ -0.93
VTI1A-203ENST00000472892 TMEM218A2RU14 115 aa9.23□□□□□ -0.93
VTI1A-203ENST00000472892 UQCC3Q6UW78 93 aa9.23□□□□□ -0.93
VTI1A-203ENST00000472892 ERASQ7Z444 233 aa9.23□□□□□ -0.93
VTI1A-203ENST00000472892 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.22□□□□□ -0.93
VTI1A-203ENST00000472892 GEMIN7Q9H840 131 aaKnown RBP9.22□□□□□ -0.93
VTI1A-203ENST00000472892 F8VRH5 84 aa9.21□□□□□ -0.94
VTI1A-203ENST00000472892 KRTAP1-4P0C5Y4 121 aa9.21□□□□□ -0.94
VTI1A-203ENST00000472892 LINC00469Q8N7U9 141 aa9.21□□□□□ -0.94
VTI1A-203ENST00000472892 SCGB3A1Q96QR1 104 aa9.21□□□□□ -0.94
VTI1A-203ENST00000472892 C22orf24Q9Y442 160 aa9.21□□□□□ -0.94
VTI1A-203ENST00000472892 IGLV1-50A0A075B6I6 118 aa9.2□□□□□ -0.94
VTI1A-203ENST00000472892 LINC01546A6NGU7 62 aa9.2□□□□□ -0.94
VTI1A-203ENST00000472892 GNB1LQ9BYB4 327 aa9.2□□□□□ -0.94
VTI1A-203ENST00000472892 XAGE1AQ9HD64 81 aa9.2□□□□□ -0.94
VTI1A-203ENST00000472892 TINCRA0A1B0GVN0 87 aa9.19□□□□□ -0.94
VTI1A-203ENST00000472892 LINC01549A6NIU2 74 aa9.19□□□□□ -0.94
VTI1A-203ENST00000472892 IGLV5-45A0A087WSX0 123 aa9.18□□□□□ -0.94
VTI1A-203ENST00000472892 KRTAP9-6A0A140TA67 174 aa9.18□□□□□ -0.94
VTI1A-203ENST00000472892 ZNF861PO60384 105 aa9.18□□□□□ -0.94
VTI1A-203ENST00000472892 CXCL5P42830 114 aa9.18□□□□□ -0.94
VTI1A-203ENST00000472892 IFITM2Q01629 132 aa9.18□□□□□ -0.94
VTI1A-203ENST00000472892 LBHQ53QV2 105 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-203ENST00000472892 PDZD11Q5EBL8 140 aa9.18□□□□□ -0.94
VTI1A-203ENST00000472892 SEC11CQ9BY50 192 aa9.18□□□□□ -0.94
VTI1A-203ENST00000472892 SMIM1B2RUZ4 78 aa9.17□□□□□ -0.94
VTI1A-203ENST00000472892 S100PP25815 95 aa9.17□□□□□ -0.94
VTI1A-203ENST00000472892 CST9LQ9H4G1 147 aa9.17□□□□□ -0.94
VTI1A-203ENST00000472892 NUPR1O60356 82 aa9.16□□□□□ -0.94
VTI1A-203ENST00000472892 TP73-AS1Q9UF72 201 aa9.16□□□□□ -0.94
VTI1A-203ENST00000472892 LPAP08519 4548 aa9.15□□□□□ -0.94
VTI1A-203ENST00000472892 COX19Q49B96 90 aa9.15□□□□□ -0.94
VTI1A-203ENST00000472892 COX7B2Q8TF08 81 aa9.15□□□□□ -0.94
VTI1A-203ENST00000472892 CARHSP1Q9Y2V2 147 aaKnown RBP9.15□□□□□ -0.94
VTI1A-203ENST00000472892 PMVKQ15126 192 aa9.14□□□□□ -0.95
VTI1A-203ENST00000472892 MRPL55Q7Z7F7 128 aaKnown RBP9.14□□□□□ -0.95
VTI1A-203ENST00000472892 RPL13AP40429 203 aaKnown RBP9.13□□□□□ -0.95
VTI1A-203ENST00000472892 FABP9Q0Z7S8 132 aa9.12□□□□□ -0.95
VTI1A-203ENST00000472892 C10orf91Q5T1B1 145 aa9.12□□□□□ -0.95
VTI1A-203ENST00000472892 FA2HQ7L5A8 372 aa9.12□□□□□ -0.95
VTI1A-203ENST00000472892 SPINK8P0C7L1 97 aa9.11□□□□□ -0.95
VTI1A-203ENST00000472892 BCE1O60756 84 aa9.1□□□□□ -0.95
VTI1A-203ENST00000472892 LINC00167Q96N53 147 aa9.1□□□□□ -0.95
VTI1A-203ENST00000472892 SMCO4Q9NRQ5 59 aa9.1□□□□□ -0.95
VTI1A-203ENST00000472892 RPL28P46779 137 aaKnown RBP9.09□□□□□ -0.95
VTI1A-203ENST00000472892 RAB5BP61020 215 aa9.09□□□□□ -0.95
VTI1A-203ENST00000472892 COMMD7Q86VX2 200 aa9.09□□□□□ -0.95
VTI1A-203ENST00000472892 IGLV5-37A0A075B6J1 123 aa9.08□□□□□ -0.96
VTI1A-203ENST00000472892 RPL37AP8A6NKH3 93 aa9.08□□□□□ -0.96
VTI1A-203ENST00000472892 H3BRM9 83 aa9.08□□□□□ -0.96
VTI1A-203ENST00000472892 RHEBQ15382 184 aa9.08□□□□□ -0.96
VTI1A-203ENST00000472892 RPS10P5Q9NQ39 176 aa9.08□□□□□ -0.96
VTI1A-203ENST00000472892 A0A096LNJ9 63 aa9.07□□□□□ -0.96
VTI1A-203ENST00000472892 IGLC3P0DOY3 106 aa9.07□□□□□ -0.96
VTI1A-203ENST00000472892 IGLV5-39A0A0G2JS06 123 aa9.06□□□□□ -0.96
VTI1A-203ENST00000472892 ATP5LO75964 103 aa9.06□□□□□ -0.96
VTI1A-203ENST00000472892 URB1-AS1Q96HZ7 61 aa9.06□□□□□ -0.96
VTI1A-203ENST00000472892 GAGE10A6NGK3 116 aa9.05□□□□□ -0.96
VTI1A-203ENST00000472892 LINC00614P0C842 121 aa9.05□□□□□ -0.96
VTI1A-203ENST00000472892 NDUFA6P56556 154 aa9.04□□□□□ -0.96
VTI1A-203ENST00000472892 C18orf32Q8TCD1 76 aa9.04□□□□□ -0.96
VTI1A-203ENST00000472892 KRTAP4-12Q9BQ66 201 aa9.04□□□□□ -0.96
VTI1A-203ENST00000472892 TRAPPC1Q9Y5R8 145 aa9.04□□□□□ -0.96
VTI1A-203ENST00000472892 A0A087X002 238 aa9.03□□□□□ -0.96
VTI1A-203ENST00000472892 ZNF22P17026 224 aaPredicted RBP9.03□□□□□ -0.96
VTI1A-203ENST00000472892 KRTAP13-1Q8IUC0 172 aa9.03□□□□□ -0.96
VTI1A-203ENST00000472892 NKAPP1Q8N9T2 125 aa9.03□□□□□ -0.96
VTI1A-203ENST00000472892 HBDP02042 147 aa9.02□□□□□ -0.97
VTI1A-203ENST00000472892 CRYGAP11844 174 aa9.02□□□□□ -0.97
VTI1A-203ENST00000472892 PFN2P35080 140 aa9.02□□□□□ -0.97
VTI1A-203ENST00000472892 PRR4Q16378 134 aa9.02□□□□□ -0.97
VTI1A-203ENST00000472892 SCO1O75880 301 aa9□□□□□ -0.97
VTI1A-203ENST00000472892 COX17Q14061 63 aa9□□□□□ -0.97
VTI1A-203ENST00000472892 PMCHL1Q16048 86 aa9□□□□□ -0.97
VTI1A-203ENST00000472892 SND1-IT1Q9HBX3 110 aa9□□□□□ -0.97
VTI1A-203ENST00000472892 ERG28Q9UKR5 140 aa9□□□□□ -0.97
VTI1A-203ENST00000472892 TSPAN13O95857 204 aa8.99□□□□□ -0.97
VTI1A-203ENST00000472892 VPREB1P12018 145 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms