RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 CENPEQ02224 2701 aa5.3□□□□□ -1.56
CCDC171-205ENST00000472806 GAGE12HA6NDE8 117 aa5.29□□□□□ -1.56
CCDC171-205ENST00000472806 LST1O00453 97 aa5.29□□□□□ -1.56
CCDC171-205ENST00000472806 CRPP02741 224 aa5.29□□□□□ -1.56
CCDC171-205ENST00000472806 SCGB1A1P11684 91 aa5.29□□□□□ -1.56
CCDC171-205ENST00000472806 LINC00158P58513 81 aa5.29□□□□□ -1.56
CCDC171-205ENST00000472806 C6orf226Q5I0X4 101 aa5.29□□□□□ -1.56
CCDC171-205ENST00000472806 LELP1Q5T871 98 aa5.29□□□□□ -1.56
CCDC171-205ENST00000472806 MTURNQ8N3F0 131 aa5.29□□□□□ -1.56
CCDC171-205ENST00000472806 DAND5Q8N907 189 aa5.29□□□□□ -1.56
CCDC171-205ENST00000472806 A0A0U1RRA0 63 aa5.28□□□□□ -1.56
CCDC171-205ENST00000472806 COX7A2LO14548 114 aa5.28□□□□□ -1.56
CCDC171-205ENST00000472806 CFAP161Q6P656 301 aa5.28□□□□□ -1.56
CCDC171-205ENST00000472806 CD164L2Q6UWJ8 174 aa5.28□□□□□ -1.56
CCDC171-205ENST00000472806 C2orf82Q6UX34 121 aa5.28□□□□□ -1.56
CCDC171-205ENST00000472806 C5orf38Q86SI9 138 aa5.28□□□□□ -1.56
CCDC171-205ENST00000472806 MIR7-3HGQ8N6C7 128 aa5.28□□□□□ -1.56
CCDC171-205ENST00000472806 MUC7Q8TAX7 377 aa5.28□□□□□ -1.56
CCDC171-205ENST00000472806 CARD19Q96LW7 228 aa5.28□□□□□ -1.56
CCDC171-205ENST00000472806 H3BNG1 76 aa5.27□□□□□ -1.57
CCDC171-205ENST00000472806 ANGP03950 147 aaKnown RBP5.27□□□□□ -1.57
CCDC171-205ENST00000472806 MALP21145 153 aa5.27□□□□□ -1.57
CCDC171-205ENST00000472806 XCL1P47992 114 aa5.27□□□□□ -1.57
CCDC171-205ENST00000472806 CKS1BP61024 79 aa5.27□□□□□ -1.57
CCDC171-205ENST00000472806 COX17Q14061 63 aa5.27□□□□□ -1.57
CCDC171-205ENST00000472806 UBE2WQ96B02 151 aa5.27□□□□□ -1.57
CCDC171-205ENST00000472806 SND1-IT1Q9HBX3 110 aa5.27□□□□□ -1.57
CCDC171-205ENST00000472806 UNC79Q9P2D8 2635 aa5.27□□□□□ -1.57
CCDC171-205ENST00000472806 TENM4Q6N022 2769 aa5.26□□□□□ -1.57
CCDC171-205ENST00000472806 DEFB4AO15263 64 aa5.26□□□□□ -1.57
CCDC171-205ENST00000472806 TRACP01848 142 aa5.26□□□□□ -1.57
CCDC171-205ENST00000472806 RPL28P46779 137 aaKnown RBP5.26□□□□□ -1.57
CCDC171-205ENST00000472806 REG3AQ06141 175 aa5.26□□□□□ -1.57
CCDC171-205ENST00000472806 SOSTDC1Q6X4U4 206 aa5.26□□□□□ -1.57
CCDC171-205ENST00000472806 C3orf56Q8N813 242 aa5.26□□□□□ -1.57
CCDC171-205ENST00000472806 SPATA3Q8NHX4 192 aa5.26□□□□□ -1.57
CCDC171-205ENST00000472806 MAP1AP78559 2803 aaPredicted RBP5.26□□□□□ -1.57
CCDC171-205ENST00000472806 ACANP16112 2415 aa5.25□□□□□ -1.57
CCDC171-205ENST00000472806 A0A096LPF7 62 aa5.25□□□□□ -1.57
CCDC171-205ENST00000472806 H0YGX0 51 aa5.25□□□□□ -1.57
CCDC171-205ENST00000472806 HTN3P15516 51 aa5.25□□□□□ -1.57
CCDC171-205ENST00000472806 EGFEM1PQ0D2K5 195 aa5.25□□□□□ -1.57
CCDC171-205ENST00000472806 LINC00269Q8N2A0 174 aa5.25□□□□□ -1.57
CCDC171-205ENST00000472806 CHCHD10Q8WYQ3 142 aaPredicted RBP5.25□□□□□ -1.57
CCDC171-205ENST00000472806 C11orf68Q9H3H3 251 aaKnown RBP5.25□□□□□ -1.57
CCDC171-205ENST00000472806 CELA1Q9UNI1 258 aa5.25□□□□□ -1.57
CCDC171-205ENST00000472806 ZNF469Q96JG9 3925 aaPredicted RBP5.25□□□□□ -1.57
CCDC171-205ENST00000472806 CHD6Q8TD26 2715 aa5.24□□□□□ -1.57
CCDC171-205ENST00000472806 TRAV8-4A0A0B4J246 113 aa5.24□□□□□ -1.57
CCDC171-205ENST00000472806 PFN2P35080 140 aa5.24□□□□□ -1.57
CCDC171-205ENST00000472806 NTN5Q8WTR8 489 aaPredicted RBP5.24□□□□□ -1.57
CCDC171-205ENST00000472806 CLEC2BQ92478 149 aa5.24□□□□□ -1.57
CCDC171-205ENST00000472806 AKAP9Q99996 3911 aa5.24□□□□□ -1.57
CCDC171-205ENST00000472806 FASNP49327 2511 aaKnown RBP5.24□□□□□ -1.57
CCDC171-205ENST00000472806 NDUFC2O95298 119 aa5.23□□□□□ -1.57
CCDC171-205ENST00000472806 CCL18P55774 89 aa5.23□□□□□ -1.57
CCDC171-205ENST00000472806 CLPSL2Q6UWE3 100 aa5.23□□□□□ -1.57
CCDC171-205ENST00000472806 KLK5Q9Y337 293 aaPredicted RBP5.23□□□□□ -1.57
CCDC171-205ENST00000472806 NBPF19A0A087WUL8 3843 aa5.23□□□□□ -1.57
CCDC171-205ENST00000472806 HELZ2Q9BYK8 2649 aaKnown RBP5.22□□□□□ -1.57
CCDC171-205ENST00000472806 SNCGO76070 127 aa5.22□□□□□ -1.57
CCDC171-205ENST00000472806 DNAL4O96015 105 aa5.22□□□□□ -1.57
CCDC171-205ENST00000472806 KRTAP24-1Q3LI83 254 aa5.22□□□□□ -1.57
CCDC171-205ENST00000472806 PRR34Q9NV39 138 aa5.22□□□□□ -1.57
CCDC171-205ENST00000472806 MTORP42345 2549 aa5.21□□□□□ -1.58
CCDC171-205ENST00000472806 FAM240AA0A1B0GVK7 77 aa5.21□□□□□ -1.58
CCDC171-205ENST00000472806 A0A1B0GX51 115 aa5.21□□□□□ -1.58
CCDC171-205ENST00000472806 ACYP1P07311 99 aa5.21□□□□□ -1.58
CCDC171-205ENST00000472806 SPAG11BQ08648 103 aa5.21□□□□□ -1.58
CCDC171-205ENST00000472806 DEFB121Q5J5C9 76 aa5.21□□□□□ -1.58
CCDC171-205ENST00000472806 LYPD5Q6UWN5 251 aa5.21□□□□□ -1.58
CCDC171-205ENST00000472806 OR13C6PQ8NH95 151 aa5.21□□□□□ -1.58
CCDC171-205ENST00000472806 IGKV2-28A0A075B6P5 120 aa5.2□□□□□ -1.58
CCDC171-205ENST00000472806 IGKV2D-28P01615 120 aa5.2□□□□□ -1.58
CCDC171-205ENST00000472806 INAFM2P0DMQ5 153 aa5.2□□□□□ -1.58
CCDC171-205ENST00000472806 KRTAP10-11P60412 298 aa5.2□□□□□ -1.58
CCDC171-205ENST00000472806 KIAA0087Q14695 138 aa5.2□□□□□ -1.58
CCDC171-205ENST00000472806 C21orf62-AS1Q17RA5 79 aa5.2□□□□□ -1.58
CCDC171-205ENST00000472806 KPRPQ5T749 579 aaPredicted RBP5.2□□□□□ -1.58
CCDC171-205ENST00000472806 LINC00337Q8N6G1 96 aa5.2□□□□□ -1.58
CCDC171-205ENST00000472806 TMEM126AQ9H061 195 aa5.2□□□□□ -1.58
CCDC171-205ENST00000472806 CDIP1Q9H305 208 aa5.2□□□□□ -1.58
CCDC171-205ENST00000472806 KLK12Q9UKR0 248 aa5.2□□□□□ -1.58
CCDC171-205ENST00000472806 C2CD3Q4AC94 2353 aa5.19□□□□□ -1.58
CCDC171-205ENST00000472806 IGLV10-54A0A075B6I4 117 aa5.19□□□□□ -1.58
CCDC171-205ENST00000472806 GVQW2A0A096LPI5 108 aaPredicted RBP5.19□□□□□ -1.58
CCDC171-205ENST00000472806 A0A0J9YWU9 116 aa5.19□□□□□ -1.58
CCDC171-205ENST00000472806 TEX49A0A1B0GTD5 131 aa5.19□□□□□ -1.58
CCDC171-205ENST00000472806 F8WDY8 70 aa5.19□□□□□ -1.58
CCDC171-205ENST00000472806 BAALC-AS2P0C853 105 aa5.19□□□□□ -1.58
CCDC171-205ENST00000472806 SMIM11BQ8TCY0 68 aa5.19□□□□□ -1.58
CCDC171-205ENST00000472806 ITPR2Q14571 2701 aa5.18□□□□□ -1.58
CCDC171-205ENST00000472806 FN1P02751 2386 aaKnown RBP5.18□□□□□ -1.58
CCDC171-205ENST00000472806 C11orf45Q8TAV5 145 aa5.18□□□□□ -1.58
CCDC171-205ENST00000472806 NOTCH3Q9UM47 2321 aa5.18□□□□□ -1.58
CCDC171-205ENST00000472806 C15orf53Q8NAA6 179 aa5.17□□□□□ -1.58
CCDC171-205ENST00000472806 SETXQ7Z333 2677 aaKnown RBP5.17□□□□□ -1.58
CCDC171-205ENST00000472806 DEFB131BA0A096LNP1 70 aa5.16□□□□□ -1.58
CCDC171-205ENST00000472806 A0A1B0GV72 72 aa5.16□□□□□ -1.58
CCDC171-205ENST00000472806 H3BQ85 93 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms