RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 MYOZ3Q8TDC0 251 aa-0.92□□□□□ -2.56
COMMD3-211ENST00000472673 LCN9Q8WX39 176 aa-0.92□□□□□ -2.56
COMMD3-211ENST00000472673 SPRR4Q96PI1 79 aa-0.92□□□□□ -2.56
COMMD3-211ENST00000472673 SPRR2FQ96RM1 72 aa-0.92□□□□□ -2.56
COMMD3-211ENST00000472673 MYOM1P52179 1685 aa-0.92□□□□□ -2.56
COMMD3-211ENST00000472673 KALRNO60229 2985 aa-0.92□□□□□ -2.56
COMMD3-211ENST00000472673 ANKRD36A6QL64 1941 aa-0.93□□□□□ -2.56
COMMD3-211ENST00000472673 KIAA1109Q2LD37 5005 aa-0.93□□□□□ -2.56
COMMD3-211ENST00000472673 ROBO1Q9Y6N7 1651 aa-0.93□□□□□ -2.56
COMMD3-211ENST00000472673 CPSF4LA6NMK7 179 aaKnown RBP-0.93□□□□□ -2.56
COMMD3-211ENST00000472673 SSSCA1O60232 199 aa-0.93□□□□□ -2.56
COMMD3-211ENST00000472673 APOC2P02655 101 aa-0.93□□□□□ -2.56
COMMD3-211ENST00000472673 C8orf59Q8N0T1 100 aaPredicted RBP-0.93□□□□□ -2.56
COMMD3-211ENST00000472673 C9orf62Q8N4C0 152 aa-0.93□□□□□ -2.56
COMMD3-211ENST00000472673 CDC42SE2Q9NRR3 84 aa-0.93□□□□□ -2.56
COMMD3-211ENST00000472673 PDCD11Q14690 1871 aaKnown RBP-0.93□□□□□ -2.56
COMMD3-211ENST00000472673 MAGI1Q96QZ7 1491 aaPredicted RBP-0.93□□□□□ -2.56
COMMD3-211ENST00000472673 MBD5Q9P267 1494 aa-0.93□□□□□ -2.56
COMMD3-211ENST00000472673 OOSP1A8MZH6 123 aa-0.94□□□□□ -2.56
COMMD3-211ENST00000472673 SFTA2Q6UW10 78 aa-0.94□□□□□ -2.56
COMMD3-211ENST00000472673 UQCR10Q9UDW1 63 aa-0.94□□□□□ -2.56
COMMD3-211ENST00000472673 NBEAQ8NFP9 2946 aa-0.94□□□□□ -2.56
COMMD3-211ENST00000472673 TET3O43151 1660 aa-0.94□□□□□ -2.56
COMMD3-211ENST00000472673 A0A0G2JMZ2 1700 aa-0.95□□□□□ -2.56
COMMD3-211ENST00000472673 VPS13DQ5THJ4 4388 aa-0.95□□□□□ -2.56
COMMD3-211ENST00000472673 NIPBLQ6KC79 2804 aaeCLIP-0.95□□□□□ -2.56
COMMD3-211ENST00000472673 MT1AP04731 61 aa-0.95□□□□□ -2.56
COMMD3-211ENST00000472673 BTG2P78543 158 aa-0.95□□□□□ -2.56
COMMD3-211ENST00000472673 QRICH2Q9H0J4 1663 aa-0.95□□□□□ -2.56
COMMD3-211ENST00000472673 SHROOM2Q13796 1616 aa-0.96□□□□□ -2.56
COMMD3-211ENST00000472673 COL4A6Q14031 1691 aa-0.96□□□□□ -2.56
COMMD3-211ENST00000472673 NDUFA2O43678 99 aa-0.96□□□□□ -2.56
COMMD3-211ENST00000472673 WHAMMP3Q1A5X7 153 aa-0.96□□□□□ -2.56
COMMD3-211ENST00000472673 CCDC58Q4VC31 144 aa-0.96□□□□□ -2.56
COMMD3-211ENST00000472673 CUBNO60494 3623 aa-0.96□□□□□ -2.56
COMMD3-211ENST00000472673 VPS13BQ7Z7G8 4022 aa-0.96□□□□□ -2.56
COMMD3-211ENST00000472673 SMG6Q86US8 1419 aaKnown RBP-0.97□□□□□ -2.56
COMMD3-211ENST00000472673 UNC13AQ9UPW8 1703 aa-0.97□□□□□ -2.56
COMMD3-211ENST00000472673 MARF1Q9Y4F3 1742 aaKnown RBP-0.97□□□□□ -2.56
COMMD3-211ENST00000472673 GNG11P61952 73 aa-0.97□□□□□ -2.56
COMMD3-211ENST00000472673 CRIPTQ9P021 101 aa-0.97□□□□□ -2.56
COMMD3-211ENST00000472673 DNAH2Q9P225 4427 aa-0.97□□□□□ -2.56
COMMD3-211ENST00000472673 TEX15Q9BXT5 2789 aa-0.97□□□□□ -2.57
COMMD3-211ENST00000472673 ACACAQ13085 2346 aa-0.98□□□□□ -2.57
COMMD3-211ENST00000472673 C1orf167Q5SNV9 1468 aa-0.98□□□□□ -2.57
COMMD3-211ENST00000472673 AKAIN1P0CW23 69 aa-0.98□□□□□ -2.57
COMMD3-211ENST00000472673 H1FX-AS1Q4G0G2 97 aa-0.98□□□□□ -2.57
COMMD3-211ENST00000472673 FAM167A-AS1Q96KT0 104 aa-0.98□□□□□ -2.57
COMMD3-211ENST00000472673 PRO1933Q9H354 126 aa-0.98□□□□□ -2.57
COMMD3-211ENST00000472673 MANBALQ9NQG1 85 aa-0.98□□□□□ -2.57
COMMD3-211ENST00000472673 PTPN23Q9H3S7 1636 aa-0.98□□□□□ -2.57
COMMD3-211ENST00000472673 SCN7AQ01118 1682 aa-0.98□□□□□ -2.57
COMMD3-211ENST00000472673 XRN1Q8IZH2 1706 aaKnown RBP-0.98□□□□□ -2.57
COMMD3-211ENST00000472673 COL14A1Q05707 1796 aaKnown RBP-0.98□□□□□ -2.57
COMMD3-211ENST00000472673 CCDC141Q6ZP82 1450 aa-0.99□□□□□ -2.57
COMMD3-211ENST00000472673 RNF213Q63HN8 5207 aa-0.99□□□□□ -2.57
COMMD3-211ENST00000472673 PDE4DIPQ5VU43 2346 aa-0.99□□□□□ -2.57
COMMD3-211ENST00000472673 FGF7P21781 194 aa-0.99□□□□□ -2.57
COMMD3-211ENST00000472673 C9orf153Q5TBE3 101 aa-0.99□□□□□ -2.57
COMMD3-211ENST00000472673 FAM107BQ9H098 131 aa-0.99□□□□□ -2.57
COMMD3-211ENST00000472673 NUP188Q5SRE5 1749 aa-0.99□□□□□ -2.57
COMMD3-211ENST00000472673 KTN1Q86UP2 1357 aaKnown RBP-0.99□□□□□ -2.57
COMMD3-211ENST00000472673 NAIPQ13075 1403 aa-0.99□□□□□ -2.57
COMMD3-211ENST00000472673 EHBP1L1Q8N3D4 1523 aa-0.99□□□□□ -2.57
COMMD3-211ENST00000472673 ADAMTS12P58397 1594 aa-1□□□□□ -2.57
COMMD3-211ENST00000472673 ANK3Q12955 4377 aaKnown RBP-1□□□□□ -2.57
COMMD3-211ENST00000472673 UBE2L5PA0A1B0GUS4 154 aa-1□□□□□ -2.57
COMMD3-211ENST00000472673 A0A1B0GWA3 101 aa-1□□□□□ -2.57
COMMD3-211ENST00000472673 H0YGG7 62 aa-1□□□□□ -2.57
COMMD3-211ENST00000472673 SEC11AP67812 179 aa-1□□□□□ -2.57
COMMD3-211ENST00000472673 UBE2L3P68036 154 aaKnown RBP-1□□□□□ -2.57
COMMD3-211ENST00000472673 Q0VG73 95 aa-1□□□□□ -2.57
COMMD3-211ENST00000472673 WDR87Q6ZQQ6 2873 aa-1□□□□□ -2.57
COMMD3-211ENST00000472673 DNAH1Q9P2D7 4330 aa-1□□□□□ -2.57
COMMD3-211ENST00000472673 LRRK2Q5S007 2527 aa-1□□□□□ -2.57
COMMD3-211ENST00000472673 KIAA1551Q9HCM1 1747 aa-1.01□□□□□ -2.57
COMMD3-211ENST00000472673 GCN1Q92616 2671 aaKnown RBP-1.01□□□□□ -2.57
COMMD3-211ENST00000472673 FAM223BA6NKX1 122 aa-1.01□□□□□ -2.57
COMMD3-211ENST00000472673 TRAPPC2P0DI81 140 aa-1.01□□□□□ -2.57
COMMD3-211ENST00000472673 TRAPPC2BP0DI82 140 aa-1.01□□□□□ -2.57
COMMD3-211ENST00000472673 TSC22D3Q99576 134 aa-1.01□□□□□ -2.57
COMMD3-211ENST00000472673 DPH3P1Q9H4G8 78 aa-1.01□□□□□ -2.57
COMMD3-211ENST00000472673 ADGRL2O95490 1459 aa-1.01□□□□□ -2.57
COMMD3-211ENST00000472673 NKTRP30414 1462 aaKnown RBP-1.01□□□□□ -2.57
COMMD3-211ENST00000472673 NLRP1Q9C000 1473 aa-1.01□□□□□ -2.57
COMMD3-211ENST00000472673 I3L3M4 83 aa-1.02□□□□□ -2.57
COMMD3-211ENST00000472673 K7EP13 123 aa-1.02□□□□□ -2.57
COMMD3-211ENST00000472673 SLIT1O75093 1534 aa-1.02□□□□□ -2.57
COMMD3-211ENST00000472673 LAMA2P24043 3122 aaKnown RBP-1.02□□□□□ -2.57
COMMD3-211ENST00000472673 MGAM2Q2M2H8 2515 aa-1.02□□□□□ -2.57
COMMD3-211ENST00000472673 PKD1L2Q7Z442 2459 aa-1.02□□□□□ -2.57
COMMD3-211ENST00000472673 PP6455Q8WZ26 134 aa-1.02□□□□□ -2.57
COMMD3-211ENST00000472673 UTP20O75691 2785 aaKnown RBP-1.02□□□□□ -2.57
COMMD3-211ENST00000472673 RGPD2P0DJD1 1756 aa-1.03□□□□□ -2.57
COMMD3-211ENST00000472673 A0A0C4DFX4 3053 aa-1.03□□□□□ -2.57
COMMD3-211ENST00000472673 A2ML1A8K2U0 1454 aa-1.03□□□□□ -2.57
COMMD3-211ENST00000472673 PLEKHH2Q8IVE3 1493 aa-1.03□□□□□ -2.57
COMMD3-211ENST00000472673 SNAPC5O75971 98 aa-1.03□□□□□ -2.57
COMMD3-211ENST00000472673 UBE2D3P61077 147 aa-1.03□□□□□ -2.57
COMMD3-211ENST00000472673 UBE2D2P62837 147 aa-1.03□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms