RNA–Protein interactions for RNA: ENST00000471935.1

TRBV11-2-201, Transcript of T cell receptor beta variable 11-2, humanhuman

TSL 1 (best) BASIC

Gene TRBV11-2, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-2-201ENST00000471935 SEC11CQ9BY50 192 aa7.6□□□□□ -1.19
TRBV11-2-201ENST00000471935 LPAP08519 4548 aa7.6□□□□□ -1.19
TRBV11-2-201ENST00000471935 KRTAP1-4P0C5Y4 121 aa7.59□□□□□ -1.19
TRBV11-2-201ENST00000471935 C10orf91Q5T1B1 145 aa7.59□□□□□ -1.19
TRBV11-2-201ENST00000471935 ERASQ7Z444 233 aa7.59□□□□□ -1.19
TRBV11-2-201ENST00000471935 PRR26Q8N8Z3 221 aa7.59□□□□□ -1.19
TRBV11-2-201ENST00000471935 GNB1LQ9BYB4 327 aa7.59□□□□□ -1.19
TRBV11-2-201ENST00000471935 SMIM1B2RUZ4 78 aa7.58□□□□□ -1.2
TRBV11-2-201ENST00000471935 HERVK_113P63121 156 aa7.58□□□□□ -1.2
TRBV11-2-201ENST00000471935 C6orf226Q5I0X4 101 aa7.58□□□□□ -1.2
TRBV11-2-201ENST00000471935 PACRGQ96M98 296 aaPredicted RBP7.58□□□□□ -1.2
TRBV11-2-201ENST00000471935 SCGB3A1Q96QR1 104 aa7.58□□□□□ -1.2
TRBV11-2-201ENST00000471935 XAGE1AQ9HD64 81 aa7.58□□□□□ -1.2
TRBV11-2-201ENST00000471935 H0Y9J4 135 aa7.57□□□□□ -1.2
TRBV11-2-201ENST00000471935 PRSS2P07478 247 aa7.57□□□□□ -1.2
TRBV11-2-201ENST00000471935 COMMD7Q86VX2 200 aa7.57□□□□□ -1.2
TRBV11-2-201ENST00000471935 IGLV5-45A0A087WSX0 123 aa7.56□□□□□ -1.2
TRBV11-2-201ENST00000471935 A0A096LNJ9 63 aa7.56□□□□□ -1.2
TRBV11-2-201ENST00000471935 CKS1BP61024 79 aa7.56□□□□□ -1.2
TRBV11-2-201ENST00000471935 DIRC1Q969H9 104 aa7.56□□□□□ -1.2
TRBV11-2-201ENST00000471935 URB1-AS1Q96HZ7 61 aa7.56□□□□□ -1.2
TRBV11-2-201ENST00000471935 TINCRA0A1B0GVN0 87 aa7.55□□□□□ -1.2
TRBV11-2-201ENST00000471935 PAPPA-AS1Q5QFB9 102 aa7.55□□□□□ -1.2
TRBV11-2-201ENST00000471935 MRPL18Q9H0U6 180 aaKnown RBP7.55□□□□□ -1.2
TRBV11-2-201ENST00000471935 CST9LQ9H4G1 147 aa7.55□□□□□ -1.2
TRBV11-2-201ENST00000471935 GEMIN7Q9H840 131 aaKnown RBP7.55□□□□□ -1.2
TRBV11-2-201ENST00000471935 CARHSP1Q9Y2V2 147 aaKnown RBP7.55□□□□□ -1.2
TRBV11-2-201ENST00000471935 C22orf24Q9Y442 160 aa7.55□□□□□ -1.2
TRBV11-2-201ENST00000471935 F8VRH5 84 aa7.54□□□□□ -1.2
TRBV11-2-201ENST00000471935 G0S2P27469 103 aa7.54□□□□□ -1.2
TRBV11-2-201ENST00000471935 UBE2BP63146 152 aa7.54□□□□□ -1.2
TRBV11-2-201ENST00000471935 SEC11AP67812 179 aa7.54□□□□□ -1.2
TRBV11-2-201ENST00000471935 SPINK8P0C7L1 97 aa7.53□□□□□ -1.2
TRBV11-2-201ENST00000471935 S100PP25815 95 aa7.53□□□□□ -1.2
TRBV11-2-201ENST00000471935 FABP9Q0Z7S8 132 aa7.53□□□□□ -1.2
TRBV11-2-201ENST00000471935 PDZD11Q5EBL8 140 aa7.52□□□□□ -1.21
TRBV11-2-201ENST00000471935 COX7B2Q8TF08 81 aa7.52□□□□□ -1.21
TRBV11-2-201ENST00000471935 RPS10P5Q9NQ39 176 aa7.52□□□□□ -1.21
TRBV11-2-201ENST00000471935 PMVKQ15126 192 aa7.51□□□□□ -1.21
TRBV11-2-201ENST00000471935 RHEBQ15382 184 aa7.51□□□□□ -1.21
TRBV11-2-201ENST00000471935 CXCL5P42830 114 aa7.5□□□□□ -1.21
TRBV11-2-201ENST00000471935 COX19Q49B96 90 aa7.5□□□□□ -1.21
TRBV11-2-201ENST00000471935 FA2HQ7L5A8 372 aa7.5□□□□□ -1.21
TRBV11-2-201ENST00000471935 C18orf32Q8TCD1 76 aa7.5□□□□□ -1.21
TRBV11-2-201ENST00000471935 ZNF861PO60384 105 aa7.49□□□□□ -1.21
TRBV11-2-201ENST00000471935 PMCHL1Q16048 86 aa7.49□□□□□ -1.21
TRBV11-2-201ENST00000471935 MRPL55Q7Z7F7 128 aaKnown RBP7.49□□□□□ -1.21
TRBV11-2-201ENST00000471935 TP73-AS1Q9UF72 201 aa7.49□□□□□ -1.21
TRBV11-2-201ENST00000471935 IGLV1-50A0A075B6I6 118 aa7.48□□□□□ -1.21
TRBV11-2-201ENST00000471935 IGLV5-39A0A0G2JS06 123 aa7.48□□□□□ -1.21
TRBV11-2-201ENST00000471935 LINC01549A6NIU2 74 aa7.48□□□□□ -1.21
TRBV11-2-201ENST00000471935 IGLC3P0DOY3 106 aa7.48□□□□□ -1.21
TRBV11-2-201ENST00000471935 ZNF22P17026 224 aaPredicted RBP7.48□□□□□ -1.21
TRBV11-2-201ENST00000471935 RAB5BP61020 215 aa7.48□□□□□ -1.21
TRBV11-2-201ENST00000471935 LINC00167Q96N53 147 aa7.48□□□□□ -1.21
TRBV11-2-201ENST00000471935 RPL37AP8A6NKH3 93 aa7.47□□□□□ -1.21
TRBV11-2-201ENST00000471935 SCO1O75880 301 aa7.47□□□□□ -1.21
TRBV11-2-201ENST00000471935 YPEL4Q96NS1 127 aa7.47□□□□□ -1.21
TRBV11-2-201ENST00000471935 SMCO4Q9NRQ5 59 aa7.47□□□□□ -1.21
TRBV11-2-201ENST00000471935 IGLV5-37A0A075B6J1 123 aa7.46□□□□□ -1.22
TRBV11-2-201ENST00000471935 A6NJY4 79 aa7.46□□□□□ -1.22
TRBV11-2-201ENST00000471935 NUPR1O60356 82 aa7.46□□□□□ -1.22
TRBV11-2-201ENST00000471935 LINC00614P0C842 121 aa7.46□□□□□ -1.22
TRBV11-2-201ENST00000471935 LBHQ53QV2 105 aaPredicted RBP7.46□□□□□ -1.22
TRBV11-2-201ENST00000471935 Q8NDZ9 215 aa7.46□□□□□ -1.22
TRBV11-2-201ENST00000471935 TRAPPC1Q9Y5R8 145 aa7.46□□□□□ -1.22
TRBV11-2-201ENST00000471935 A0A087X002 238 aa7.45□□□□□ -1.22
TRBV11-2-201ENST00000471935 GAGE10A6NGK3 116 aa7.45□□□□□ -1.22
TRBV11-2-201ENST00000471935 KRTAP13-1Q8IUC0 172 aa7.45□□□□□ -1.22
TRBV11-2-201ENST00000471935 C11orf86A6NJI1 115 aa7.44□□□□□ -1.22
TRBV11-2-201ENST00000471935 BCE1O60756 84 aa7.44□□□□□ -1.22
TRBV11-2-201ENST00000471935 APOC3P02656 99 aa7.44□□□□□ -1.22
TRBV11-2-201ENST00000471935 HBDP02042 147 aa7.43□□□□□ -1.22
TRBV11-2-201ENST00000471935 NDUFA6P56556 154 aa7.43□□□□□ -1.22
TRBV11-2-201ENST00000471935 H3BRM9 83 aa7.42□□□□□ -1.22
TRBV11-2-201ENST00000471935 VPREB1P12018 145 aa7.42□□□□□ -1.22
TRBV11-2-201ENST00000471935 PFN2P35080 140 aa7.42□□□□□ -1.22
TRBV11-2-201ENST00000471935 ANAPC11Q9NYG5 84 aa7.42□□□□□ -1.22
TRBV11-2-201ENST00000471935 ATP5LO75964 103 aa7.41□□□□□ -1.22
TRBV11-2-201ENST00000471935 ZNF625Q96I27 306 aaPredicted RBP7.41□□□□□ -1.22
TRBV11-2-201ENST00000471935 SND1-IT1Q9HBX3 110 aa7.41□□□□□ -1.22
TRBV11-2-201ENST00000471935 RPL13AP40429 203 aaKnown RBP7.4□□□□□ -1.22
TRBV11-2-201ENST00000471935 RPL28P46779 137 aaKnown RBP7.4□□□□□ -1.22
TRBV11-2-201ENST00000471935 KRTAP13-2Q52LG2 175 aa7.4□□□□□ -1.22
TRBV11-2-201ENST00000471935 BAGE3Q86Y29 109 aa7.4□□□□□ -1.22
TRBV11-2-201ENST00000471935 ERG28Q9UKR5 140 aa7.4□□□□□ -1.22
TRBV11-2-201ENST00000471935 IGKV2-28A0A075B6P5 120 aa7.39□□□□□ -1.23
TRBV11-2-201ENST00000471935 IGKV2D-28P01615 120 aa7.39□□□□□ -1.23
TRBV11-2-201ENST00000471935 SNAPINO95295 136 aa7.38□□□□□ -1.23
TRBV11-2-201ENST00000471935 SVBPQ8N300 66 aa7.38□□□□□ -1.23
TRBV11-2-201ENST00000471935 NKAPP1Q8N9T2 125 aa7.38□□□□□ -1.23
TRBV11-2-201ENST00000471935 TMEM238C9JI98 176 aa7.37□□□□□ -1.23
TRBV11-2-201ENST00000471935 TMEM170BQ5T4T1 132 aa7.37□□□□□ -1.23
TRBV11-2-201ENST00000471935 MUC2Q02817 5179 aa7.36□□□□□ -1.23
TRBV11-2-201ENST00000471935 TMEM223A0PJW6 202 aa7.36□□□□□ -1.23
TRBV11-2-201ENST00000471935 TSPAN13O95857 204 aa7.36□□□□□ -1.23
TRBV11-2-201ENST00000471935 PRLHP81277 87 aa7.36□□□□□ -1.23
TRBV11-2-201ENST00000471935 CBLN2Q8IUK8 224 aa7.36□□□□□ -1.23
TRBV11-2-201ENST00000471935 CHTOPQ9Y3Y2 248 aaKnown RBP7.36□□□□□ -1.23
TRBV11-2-201ENST00000471935 M0R378 163 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms