RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TOMM7Q9P0U1 55 aa4.83□□□□□ -1.64
USP48-207ENST00000471752 CDKN2A-AS1Q9UH64 79 aa4.83□□□□□ -1.64
USP48-207ENST00000471752 FAT4Q6V0I7 4981 aa4.83□□□□□ -1.64
USP48-207ENST00000471752 NDUFC2-KCTD14E9PQ53 114 aa4.82□□□□□ -1.64
USP48-207ENST00000471752 TEX43Q6ZNM6 134 aa4.82□□□□□ -1.64
USP48-207ENST00000471752 MAP1LC3AQ9H492 121 aa4.82□□□□□ -1.64
USP48-207ENST00000471752 ANAPC11Q9NYG5 84 aa4.82□□□□□ -1.64
USP48-207ENST00000471752 PKIGQ9Y2B9 76 aa4.82□□□□□ -1.64
USP48-207ENST00000471752 C22orf24Q9Y442 160 aa4.82□□□□□ -1.64
USP48-207ENST00000471752 MUC17Q685J3 4493 aa4.82□□□□□ -1.64
USP48-207ENST00000471752 F8WDY8 70 aa4.81□□□□□ -1.64
USP48-207ENST00000471752 SCO1O75880 301 aa4.81□□□□□ -1.64
USP48-207ENST00000471752 IFITM2Q01629 132 aa4.81□□□□□ -1.64
USP48-207ENST00000471752 DIRC1Q969H9 104 aa4.81□□□□□ -1.64
USP48-207ENST00000471752 VCX2Q9H322 139 aa4.81□□□□□ -1.64
USP48-207ENST00000471752 CYSLTR1Q9Y271 337 aa4.81□□□□□ -1.64
USP48-207ENST00000471752 TRBV30A0A0K0K1B3 111 aa4.8□□□□□ -1.64
USP48-207ENST00000471752 MT-ND4LP03901 98 aa4.8□□□□□ -1.64
USP48-207ENST00000471752 UBE2BP63146 152 aa4.8□□□□□ -1.64
USP48-207ENST00000471752 C6orf226Q5I0X4 101 aa4.8□□□□□ -1.64
USP48-207ENST00000471752 FAM19A3Q7Z5A8 133 aa4.8□□□□□ -1.64
USP48-207ENST00000471752 ANAPC16Q96DE5 110 aa4.8□□□□□ -1.64
USP48-207ENST00000471752 A0A087X002 238 aa4.79□□□□□ -1.64
USP48-207ENST00000471752 RPL37AP8A6NKH3 93 aa4.79□□□□□ -1.64
USP48-207ENST00000471752 Q6ZN92 141 aa4.79□□□□□ -1.64
USP48-207ENST00000471752 TOMM6Q96B49 74 aa4.79□□□□□ -1.64
USP48-207ENST00000471752 PACRGQ96M98 296 aaPredicted RBP4.79□□□□□ -1.64
USP48-207ENST00000471752 ALKBH7Q9BT30 221 aaPredicted RBP4.79□□□□□ -1.64
USP48-207ENST00000471752 CTDSP1Q9GZU7 261 aa4.79□□□□□ -1.64
USP48-207ENST00000471752 GAGE10A6NGK3 116 aa4.78□□□□□ -1.64
USP48-207ENST00000471752 SMIM1B2RUZ4 78 aa4.78□□□□□ -1.64
USP48-207ENST00000471752 TSPAN13O95857 204 aa4.78□□□□□ -1.64
USP48-207ENST00000471752 SPINK8P0C7L1 97 aa4.78□□□□□ -1.64
USP48-207ENST00000471752 RAB5BP61020 215 aa4.78□□□□□ -1.64
USP48-207ENST00000471752 ORMDL2Q53FV1 153 aa4.78□□□□□ -1.64
USP48-207ENST00000471752 LINC01561Q8N1V8 128 aa4.78□□□□□ -1.64
USP48-207ENST00000471752 LINC00167Q96N53 147 aa4.78□□□□□ -1.64
USP48-207ENST00000471752 LAMTOR2Q9Y2Q5 125 aa4.78□□□□□ -1.64
USP48-207ENST00000471752 TMEM218A2RU14 115 aa4.77□□□□□ -1.65
USP48-207ENST00000471752 ZNF861PO60384 105 aa4.77□□□□□ -1.65
USP48-207ENST00000471752 CKS1BP61024 79 aa4.77□□□□□ -1.65
USP48-207ENST00000471752 CLLU1Q5K131 121 aa4.77□□□□□ -1.65
USP48-207ENST00000471752 Q8IZM0 81 aa4.77□□□□□ -1.65
USP48-207ENST00000471752 Q8NDZ9 215 aa4.77□□□□□ -1.65
USP48-207ENST00000471752 URB1-AS1Q96HZ7 61 aa4.77□□□□□ -1.65
USP48-207ENST00000471752 SCGB3A1Q96QR1 104 aa4.77□□□□□ -1.65
USP48-207ENST00000471752 C2orf88Q9BSF0 95 aa4.77□□□□□ -1.65
USP48-207ENST00000471752 CST9LQ9H4G1 147 aa4.77□□□□□ -1.65
USP48-207ENST00000471752 PRSS2P07478 247 aa4.76□□□□□ -1.65
USP48-207ENST00000471752 PNRC1Q12796 327 aaPredicted RBP4.76□□□□□ -1.65
USP48-207ENST00000471752 PRR4Q16378 134 aa4.76□□□□□ -1.65
USP48-207ENST00000471752 TIMM17AQ99595 171 aa4.76□□□□□ -1.65
USP48-207ENST00000471752 NXT2Q9NPJ8 142 aaKnown RBP4.76□□□□□ -1.65
USP48-207ENST00000471752 IGLV1-50A0A075B6I6 118 aa4.75□□□□□ -1.65
USP48-207ENST00000471752 A0A096LNJ9 63 aa4.75□□□□□ -1.65
USP48-207ENST00000471752 LINC01546A6NGU7 62 aa4.75□□□□□ -1.65
USP48-207ENST00000471752 F8VRH5 84 aa4.75□□□□□ -1.65
USP48-207ENST00000471752 HERVK_113P63121 156 aa4.75□□□□□ -1.65
USP48-207ENST00000471752 KRTAP13-2Q52LG2 175 aa4.75□□□□□ -1.65
USP48-207ENST00000471752 ERASQ7Z444 233 aa4.75□□□□□ -1.65
USP48-207ENST00000471752 COX7B2Q8TF08 81 aa4.75□□□□□ -1.65
USP48-207ENST00000471752 GEMIN7Q9H840 131 aaKnown RBP4.75□□□□□ -1.65
USP48-207ENST00000471752 IGLV5-45A0A087WSX0 123 aa4.74□□□□□ -1.65
USP48-207ENST00000471752 TINCRA0A1B0GVN0 87 aa4.74□□□□□ -1.65
USP48-207ENST00000471752 RAB14P61106 215 aa4.74□□□□□ -1.65
USP48-207ENST00000471752 PMCHL1Q16048 86 aa4.74□□□□□ -1.65
USP48-207ENST00000471752 MRPL55Q7Z7F7 128 aaKnown RBP4.74□□□□□ -1.65
USP48-207ENST00000471752 KRTAP13-1Q8IUC0 172 aa4.74□□□□□ -1.65
USP48-207ENST00000471752 NPSP0C0P6 89 aa4.73□□□□□ -1.65
USP48-207ENST00000471752 FABP9Q0Z7S8 132 aa4.73□□□□□ -1.65
USP48-207ENST00000471752 PDZD11Q5EBL8 140 aa4.73□□□□□ -1.65
USP48-207ENST00000471752 LCE4AQ5TA78 99 aa4.73□□□□□ -1.65
USP48-207ENST00000471752 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
USP48-207ENST00000471752 IGKV2-28A0A075B6P5 120 aa4.72□□□□□ -1.65
USP48-207ENST00000471752 TMEM238C9JI98 176 aa4.72□□□□□ -1.65
USP48-207ENST00000471752 K7EMI3 77 aa4.72□□□□□ -1.65
USP48-207ENST00000471752 BCE1O60756 84 aa4.72□□□□□ -1.65
USP48-207ENST00000471752 IGKV2D-28P01615 120 aa4.72□□□□□ -1.65
USP48-207ENST00000471752 PFN2P35080 140 aa4.72□□□□□ -1.65
USP48-207ENST00000471752 LBHQ53QV2 105 aaPredicted RBP4.72□□□□□ -1.65
USP48-207ENST00000471752 ZNF625Q96I27 306 aaPredicted RBP4.72□□□□□ -1.65
USP48-207ENST00000471752 RETNLBQ9BQ08 111 aa4.72□□□□□ -1.65
USP48-207ENST00000471752 GNB1LQ9BYB4 327 aa4.72□□□□□ -1.65
USP48-207ENST00000471752 IGLV5-39A0A0G2JS06 123 aa4.71□□□□□ -1.66
USP48-207ENST00000471752 PMVKQ15126 192 aa4.71□□□□□ -1.66
USP48-207ENST00000471752 TP73-AS1Q9UF72 201 aa4.71□□□□□ -1.66
USP48-207ENST00000471752 CARHSP1Q9Y2V2 147 aaKnown RBP4.71□□□□□ -1.66
USP48-207ENST00000471752 IGLV5-37A0A075B6J1 123 aa4.7□□□□□ -1.66
USP48-207ENST00000471752 NUPR1O60356 82 aa4.7□□□□□ -1.66
USP48-207ENST00000471752 ZNF22P17026 224 aaPredicted RBP4.7□□□□□ -1.66
USP48-207ENST00000471752 NDUFA6P56556 154 aa4.7□□□□□ -1.66
USP48-207ENST00000471752 SEC11AP67812 179 aa4.7□□□□□ -1.66
USP48-207ENST00000471752 PRLHP81277 87 aa4.7□□□□□ -1.66
USP48-207ENST00000471752 C10orf91Q5T1B1 145 aa4.7□□□□□ -1.66
USP48-207ENST00000471752 COMMD7Q86VX2 200 aa4.7□□□□□ -1.66
USP48-207ENST00000471752 SEC11CQ9BY50 192 aa4.7□□□□□ -1.66
USP48-207ENST00000471752 TRAV9-1A0A075B6T8 112 aa4.69□□□□□ -1.66
USP48-207ENST00000471752 C11orf86A6NJI1 115 aa4.69□□□□□ -1.66
USP48-207ENST00000471752 IGLC3P0DOY3 106 aa4.69□□□□□ -1.66
USP48-207ENST00000471752 VPREB1P12018 145 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms