RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 LINC01561Q8N1V8 128 aa7.85□□□□□ -1.15
LINC00888-202ENST00000471496 A0A087WYN8 130 aa7.84□□□□□ -1.15
LINC00888-202ENST00000471496 TRGC2P03986 189 aa7.84□□□□□ -1.15
LINC00888-202ENST00000471496 PDZD11Q5EBL8 140 aa7.84□□□□□ -1.15
LINC00888-202ENST00000471496 CAMK2N2Q96S95 79 aa7.84□□□□□ -1.15
LINC00888-202ENST00000471496 CST9LQ9H4G1 147 aa7.84□□□□□ -1.15
LINC00888-202ENST00000471496 C10orf25Q5T742 122 aa7.83□□□□□ -1.16
LINC00888-202ENST00000471496 CDKN2A-AS1Q9UH64 79 aa7.83□□□□□ -1.16
LINC00888-202ENST00000471496 IGKV2-24A0A0C4DH68 120 aa7.82□□□□□ -1.16
LINC00888-202ENST00000471496 HBDP02042 147 aa7.82□□□□□ -1.16
LINC00888-202ENST00000471496 HERVK_113P63121 156 aa7.82□□□□□ -1.16
LINC00888-202ENST00000471496 PMVKQ15126 192 aa7.82□□□□□ -1.16
LINC00888-202ENST00000471496 MRPL35Q9NZE8 188 aaKnown RBP7.82□□□□□ -1.16
LINC00888-202ENST00000471496 PLAC8Q9NZF1 115 aa7.82□□□□□ -1.16
LINC00888-202ENST00000471496 IGLV5-45A0A087WSX0 123 aa7.81□□□□□ -1.16
LINC00888-202ENST00000471496 F8WDY8 70 aa7.81□□□□□ -1.16
LINC00888-202ENST00000471496 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.81□□□□□ -1.16
LINC00888-202ENST00000471496 SCO1O75880 301 aa7.81□□□□□ -1.16
LINC00888-202ENST00000471496 RAB5BP61020 215 aa7.81□□□□□ -1.16
LINC00888-202ENST00000471496 SEC11AP67812 179 aa7.81□□□□□ -1.16
LINC00888-202ENST00000471496 RNF151Q2KHN1 245 aa7.81□□□□□ -1.16
LINC00888-202ENST00000471496 UNQ6190/PRO20217Q6UXQ8 127 aa7.81□□□□□ -1.16
LINC00888-202ENST00000471496 TINCRA0A1B0GVN0 87 aa7.81□□□□□ -1.16
LINC00888-202ENST00000471496 PTTG1IPP53801 180 aa7.81□□□□□ -1.16
LINC00888-202ENST00000471496 MAJINQ3KP22 176 aa7.81□□□□□ -1.16
LINC00888-202ENST00000471496 CHCHD1Q96BP2 118 aaKnown RBP7.81□□□□□ -1.16
LINC00888-202ENST00000471496 C6orf48Q9UBA6 75 aa7.81□□□□□ -1.16
LINC00888-202ENST00000471496 LOC107984640A0A0U1RRK4 108 aa7.8□□□□□ -1.16
LINC00888-202ENST00000471496 NDUFA1O15239 70 aa7.8□□□□□ -1.16
LINC00888-202ENST00000471496 C2orf82Q6UX34 121 aa7.8□□□□□ -1.16
LINC00888-202ENST00000471496 GEMIN7Q9H840 131 aaKnown RBP7.8□□□□□ -1.16
LINC00888-202ENST00000471496 SMIM1B2RUZ4 78 aa7.79□□□□□ -1.16
LINC00888-202ENST00000471496 INAFM2P0DMQ5 153 aa7.79□□□□□ -1.16
LINC00888-202ENST00000471496 STPG4Q8N801 248 aa7.79□□□□□ -1.16
LINC00888-202ENST00000471496 FLG2Q5D862 2391 aaPredicted RBP7.78□□□□□ -1.16
LINC00888-202ENST00000471496 Q8IZM0 81 aa7.78□□□□□ -1.16
LINC00888-202ENST00000471496 LINC00469Q8N7U9 141 aa7.78□□□□□ -1.16
LINC00888-202ENST00000471496 DPH3Q96FX2 82 aa7.78□□□□□ -1.16
LINC00888-202ENST00000471496 PKIGQ9Y2B9 76 aa7.78□□□□□ -1.16
LINC00888-202ENST00000471496 MYCBP2O75592 4640 aa7.78□□□□□ -1.16
LINC00888-202ENST00000471496 ATP5LO75964 103 aa7.77□□□□□ -1.17
LINC00888-202ENST00000471496 TLX1NBP0CAT3 122 aa7.77□□□□□ -1.17
LINC00888-202ENST00000471496 IGLC3P0DOY3 106 aa7.77□□□□□ -1.17
LINC00888-202ENST00000471496 GAGE2BQ13066 116 aa7.77□□□□□ -1.17
LINC00888-202ENST00000471496 LINC00474Q9P2X8 69 aa7.77□□□□□ -1.17
LINC00888-202ENST00000471496 NUPR1O60356 82 aa7.76□□□□□ -1.17
LINC00888-202ENST00000471496 Q6ZRP5 223 aa7.76□□□□□ -1.17
LINC00888-202ENST00000471496 BAGE3Q86Y29 109 aa7.76□□□□□ -1.17
LINC00888-202ENST00000471496 FAM19A2Q8N3H0 131 aa7.76□□□□□ -1.17
LINC00888-202ENST00000471496 TOMM7Q9P0U1 55 aa7.76□□□□□ -1.17
LINC00888-202ENST00000471496 TRBV30A0A0K0K1B3 111 aa7.75□□□□□ -1.17
LINC00888-202ENST00000471496 A0A1W2PNN7 141 aa7.75□□□□□ -1.17
LINC00888-202ENST00000471496 SERF1AO75920 110 aa7.75□□□□□ -1.17
LINC00888-202ENST00000471496 NDUFA6P56556 154 aa7.75□□□□□ -1.17
LINC00888-202ENST00000471496 RPL18AQ02543 176 aaKnown RBP7.75□□□□□ -1.17
LINC00888-202ENST00000471496 C9orf116Q5BN46 136 aaPredicted RBP7.75□□□□□ -1.17
LINC00888-202ENST00000471496 PACRGQ96M98 296 aaPredicted RBP7.75□□□□□ -1.17
LINC00888-202ENST00000471496 HSBP1O75506 76 aa7.75□□□□□ -1.17
LINC00888-202ENST00000471496 PRSS2P07478 247 aa7.75□□□□□ -1.17
LINC00888-202ENST00000471496 SPINK8P0C7L1 97 aa7.75□□□□□ -1.17
LINC00888-202ENST00000471496 ZNF22P17026 224 aaPredicted RBP7.75□□□□□ -1.17
LINC00888-202ENST00000471496 RPL37AP61513 92 aaKnown RBP7.75□□□□□ -1.17
LINC00888-202ENST00000471496 C6orf226Q5I0X4 101 aa7.75□□□□□ -1.17
LINC00888-202ENST00000471496 PKHD1L1Q86WI1 4243 aa7.74□□□□□ -1.17
LINC00888-202ENST00000471496 C11orf86A6NJI1 115 aa7.74□□□□□ -1.17
LINC00888-202ENST00000471496 HNRNPA3P51991 378 aaKnown RBP7.74□□□□□ -1.17
LINC00888-202ENST00000471496 IFI27L1Q96BM0 104 aa7.74□□□□□ -1.17
LINC00888-202ENST00000471496 IGLV5-39A0A0G2JS06 123 aa7.73□□□□□ -1.17
LINC00888-202ENST00000471496 CKS1BP61024 79 aa7.73□□□□□ -1.17
LINC00888-202ENST00000471496 TRAV12-1A0A0B4J245 112 aa7.72□□□□□ -1.17
LINC00888-202ENST00000471496 NDUFC2-KCTD14E9PQ53 114 aa7.72□□□□□ -1.17
LINC00888-202ENST00000471496 F8VRH5 84 aa7.72□□□□□ -1.17
LINC00888-202ENST00000471496 KRTAP7-1Q8IUC3 87 aa7.72□□□□□ -1.17
LINC00888-202ENST00000471496 COX7B2Q8TF08 81 aa7.72□□□□□ -1.17
LINC00888-202ENST00000471496 FAM168BA1KXE4 195 aa7.71□□□□□ -1.18
LINC00888-202ENST00000471496 CHTOPQ9Y3Y2 248 aaKnown RBP7.71□□□□□ -1.18
LINC00888-202ENST00000471496 H3BRM9 83 aa7.7□□□□□ -1.18
LINC00888-202ENST00000471496 HIST1H2BKO60814 126 aa7.7□□□□□ -1.18
LINC00888-202ENST00000471496 HIST1H2BJP06899 126 aa7.7□□□□□ -1.18
LINC00888-202ENST00000471496 HIST1H2BOP23527 126 aa7.7□□□□□ -1.18
LINC00888-202ENST00000471496 HIST1H2BBP33778 126 aa7.7□□□□□ -1.18
LINC00888-202ENST00000471496 CXCL5P42830 114 aa7.7□□□□□ -1.18
LINC00888-202ENST00000471496 HIST1H2BDP58876 126 aa7.7□□□□□ -1.18
LINC00888-202ENST00000471496 HIST1H2BCP62807 126 aa7.7□□□□□ -1.18
LINC00888-202ENST00000471496 HIST2H2BEQ16778 126 aa7.7□□□□□ -1.18
LINC00888-202ENST00000471496 GAGE2EQ4V326 116 aa7.7□□□□□ -1.18
LINC00888-202ENST00000471496 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.7□□□□□ -1.18
LINC00888-202ENST00000471496 C9orf129Q5T035 196 aaKnown RBP7.7□□□□□ -1.18
LINC00888-202ENST00000471496 HIST1H2BHQ93079 126 aa7.7□□□□□ -1.18
LINC00888-202ENST00000471496 HIST1H2BNQ99877 126 aa7.7□□□□□ -1.18
LINC00888-202ENST00000471496 HIST1H2BMQ99879 126 aa7.7□□□□□ -1.18
LINC00888-202ENST00000471496 GAGE2DQ9UEU5 116 aa7.7□□□□□ -1.18
LINC00888-202ENST00000471496 C7orf33Q8WU49 177 aa7.69□□□□□ -1.18
LINC00888-202ENST00000471496 LRP1Q07954 4544 aaKnown RBP7.69□□□□□ -1.18
LINC00888-202ENST00000471496 LEPROTL1O95214 131 aa7.68□□□□□ -1.18
LINC00888-202ENST00000471496 PRR3P79522 188 aaKnown RBP7.68□□□□□ -1.18
LINC00888-202ENST00000471496 ODF1Q14990 250 aa7.68□□□□□ -1.18
LINC00888-202ENST00000471496 TMEM170BQ5T4T1 132 aa7.68□□□□□ -1.18
LINC00888-202ENST00000471496 PHF5AQ7RTV0 110 aaKnown RBP7.68□□□□□ -1.18
LINC00888-202ENST00000471496 TMEM223A0PJW6 202 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms