RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	TMEM101	Q96IK0	257 aa		2.57	□□□□□ -2
CSMD2-208	ENST00000471438	OBSCN-AS1	Q96MR7	158 aa		2.57	□□□□□ -2
CSMD2-208	ENST00000471438	UBTD1	Q9HAC8	227 aa		2.57	□□□□□ -2
CSMD2-208	ENST00000471438	NDUFA12	Q9UI09	145 aa		2.57	□□□□□ -2
CSMD2-208	ENST00000471438	CR1	P17927	2039 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	IGHV3OR16-12	A0A075B7B8	117 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438		A0A096LNT2	108 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	TRAV8-3	A0A0A6YYJ7	113 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	TRAV25	A0A0B4J276	109 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	TRBV10-1	A0A0K0K1A3	114 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	TEX49	A0A1B0GTD5	131 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	COX7A2L	O14548	114 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	CD28	P10747	220 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	RPL28	P46779	137 aa	Known RBP	2.56	□□□□□ -2
CSMD2-208	ENST00000471438	HERVK_113	P63121	156 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	HERV-K104	P63124	156 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	ZNF415	Q09FC8	603 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	CIRBP	Q14011	172 aa	Known RBP	2.56	□□□□□ -2
CSMD2-208	ENST00000471438	SPINK13	Q1W4C9	94 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	TTC32	Q5I0X7	151 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	FAM74A4	Q5TZK3	123 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	SFTA2	Q6UW10	78 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	C5orf38	Q86SI9	138 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	PRR26	Q8N8Z3	221 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	DAND5	Q8N907	189 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	LINC00308	Q8TCZ7	52 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	ZNF625	Q96I27	306 aa	Predicted RBP	2.56	□□□□□ -2
CSMD2-208	ENST00000471438	TMEM126A	Q9H061	195 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	BEX4	Q9NWD9	120 aa	Predicted RBP	2.56	□□□□□ -2
CSMD2-208	ENST00000471438	PEMT	Q9UBM1	199 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	C22orf24	Q9Y442	160 aa		2.56	□□□□□ -2
CSMD2-208	ENST00000471438	TRAV12-2	A0A075B6T6	113 aa		2.55	□□□□□ -2
CSMD2-208	ENST00000471438	IGHV4-30-2	A0A087WSY4	118 aa		2.55	□□□□□ -2
CSMD2-208	ENST00000471438		F5H768	121 aa		2.55	□□□□□ -2
CSMD2-208	ENST00000471438	COX6A2	Q02221	97 aa		2.55	□□□□□ -2
CSMD2-208	ENST00000471438	DAZ2	Q13117	558 aa	Known RBP	2.55	□□□□□ -2
CSMD2-208	ENST00000471438	LY6E	Q16553	131 aa		2.55	□□□□□ -2
CSMD2-208	ENST00000471438	DEFB112	Q30KQ8	113 aa		2.55	□□□□□ -2
CSMD2-208	ENST00000471438	LINC00242	Q5T6M2	205 aa		2.55	□□□□□ -2
CSMD2-208	ENST00000471438	DAZ4	Q86SG3	579 aa	Known RBP	2.55	□□□□□ -2
CSMD2-208	ENST00000471438	LINC00643	Q86TS7	51 aa		2.55	□□□□□ -2
CSMD2-208	ENST00000471438	STAB2	Q8WWQ8	2551 aa		2.55	□□□□□ -2
CSMD2-208	ENST00000471438	FAM110A	Q9BQ89	295 aa		2.55	□□□□□ -2
CSMD2-208	ENST00000471438	ZNF702P	Q9H963	129 aa		2.55	□□□□□ -2
CSMD2-208	ENST00000471438	MAP6D1	Q9H9H5	199 aa		2.55	□□□□□ -2
CSMD2-208	ENST00000471438	DAZ3	Q9NR90	486 aa	Known RBP	2.55	□□□□□ -2
CSMD2-208	ENST00000471438	CDKN2A-AS1	Q9UH64	79 aa		2.55	□□□□□ -2
CSMD2-208	ENST00000471438	IGKV3-7	A0A075B6H7	116 aa		2.54	□□□□□ -2
CSMD2-208	ENST00000471438	IGHV3OR16-10	A0A075B7F0	116 aa		2.54	□□□□□ -2
CSMD2-208	ENST00000471438	LCE6A	A0A183	80 aa		2.54	□□□□□ -2
CSMD2-208	ENST00000471438	SMIM1	B2RUZ4	78 aa		2.54	□□□□□ -2
CSMD2-208	ENST00000471438	CMC4	P56277	68 aa	Predicted RBP	2.54	□□□□□ -2
CSMD2-208	ENST00000471438	SYNJ2BP	P57105	145 aa		2.54	□□□□□ -2
CSMD2-208	ENST00000471438	HIST1H4A	P62805	103 aa	Known RBP	2.54	□□□□□ -2
CSMD2-208	ENST00000471438		Q1RN00	199 aa		2.54	□□□□□ -2
CSMD2-208	ENST00000471438	DEFB114	Q30KQ6	69 aa		2.54	□□□□□ -2
CSMD2-208	ENST00000471438	CEMP1	Q6PRD7	247 aa	Predicted RBP	2.54	□□□□□ -2
CSMD2-208	ENST00000471438	SOSTDC1	Q6X4U4	206 aa		2.54	□□□□□ -2
CSMD2-208	ENST00000471438	LINC01561	Q8N1V8	128 aa		2.54	□□□□□ -2
CSMD2-208	ENST00000471438	CCL19	Q99731	98 aa		2.54	□□□□□ -2
CSMD2-208	ENST00000471438	OVOL2	Q9BRP0	275 aa		2.54	□□□□□ -2
CSMD2-208	ENST00000471438	CDC42SE2	Q9NRR3	84 aa		2.54	□□□□□ -2
CSMD2-208	ENST00000471438		Q9UF83	564 aa		2.54	□□□□□ -2
CSMD2-208	ENST00000471438	VPREB3	Q9UKI3	123 aa		2.54	□□□□□ -2
CSMD2-208	ENST00000471438	IGHV3-64	A0A075B6Q5	118 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	TRAV13-2	A0A0B4J235	113 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438		H0YGX0	51 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	CCDC179	H3BU77	68 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438		H7C2G1	150 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	TGFA	P01135	160 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	INS	P01308	110 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	IGHV4-59	P01825	116 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	BAALC-AS2	P0C853	105 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	INAFM2	P0DMQ5	153 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	DEFB131A	P59861	70 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	RPS28	P62857	69 aa	Known RBP	2.53	□□□□□ -2
CSMD2-208	ENST00000471438	C10orf99	Q6UWK7	81 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	NTM-AS1	Q6ZSK4	140 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438		Q6ZSV7	163 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	TMEM86B	Q8N661	226 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	MAPK1IP1L	Q8NDC0	245 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	C4orf3	Q8WVX3	66 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	CLEC2B	Q92478	149 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	LINC00526	Q96FQ7	95 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	LINC00167	Q96N53	147 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	DUX5	Q96PT3	197 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	DUX3	Q96PT4	197 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	LINC01587	Q99440	93 aa		2.53	□□□□□ -2
CSMD2-208	ENST00000471438	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	2.52	□□□□□ -2.01
CSMD2-208	ENST00000471438	TRBV6-4	A0A1B0GX49	114 aa		2.52	□□□□□ -2.01
CSMD2-208	ENST00000471438		A0A1B0GX51	115 aa		2.52	□□□□□ -2.01
CSMD2-208	ENST00000471438	IGKV2-29	A2NJV5	120 aa	Predicted RBP	2.52	□□□□□ -2.01
CSMD2-208	ENST00000471438	KNCN	A6PVL3	124 aa		2.52	□□□□□ -2.01
CSMD2-208	ENST00000471438		A8MZ25	164 aa		2.52	□□□□□ -2.01
CSMD2-208	ENST00000471438	IBA57-AS1	B1ANH7	110 aa		2.52	□□□□□ -2.01
CSMD2-208	ENST00000471438	UQCRQ	O14949	82 aa		2.52	□□□□□ -2.01
CSMD2-208	ENST00000471438	LINC00694	P0DN24	101 aa		2.52	□□□□□ -2.01
CSMD2-208	ENST00000471438	CRYGA	P11844	174 aa		2.52	□□□□□ -2.01
CSMD2-208	ENST00000471438	ATP5J2	P56134	94 aa		2.52	□□□□□ -2.01
CSMD2-208	ENST00000471438	TMEM95	Q3KNT9	176 aa		2.52	□□□□□ -2.01

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms